RNA–Protein interactions for RNA: ENST00000569053.5

TMX3-210, Transcript of thioredoxin related transmembrane protein 3, humanhuman

TSL 1 (best)

Gene TMX3, Length 940 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMX3-210ENST00000569053 APLP2Q06481 763 aa17.01■□□□□ 0.31
TMX3-210ENST00000569053 STAG3Q9UJ98 1225 aa17.01■□□□□ 0.31
TMX3-210ENST00000569053 FAM135BQ49AJ0 1406 aa16.99■□□□□ 0.31
TMX3-210ENST00000569053 NWD1Q149M9 1564 aa16.98■□□□□ 0.31
TMX3-210ENST00000569053 ZFYVE9O95405 1425 aa16.97■□□□□ 0.31
TMX3-210ENST00000569053 FAM50AQ14320 339 aaKnown RBP16.97■□□□□ 0.31
TMX3-210ENST00000569053 ROBO1Q9Y6N7 1651 aa16.97■□□□□ 0.31
TMX3-210ENST00000569053 ANKRD50Q9ULJ7 1429 aa16.96■□□□□ 0.31
TMX3-210ENST00000569053 PROSER2Q86WR7 435 aaPredicted RBP16.96■□□□□ 0.31
TMX3-210ENST00000569053 GCC2Q8IWJ2 1684 aa16.95■□□□□ 0.3
TMX3-210ENST00000569053 TMEM131LA2VDJ0 1609 aa16.95■□□□□ 0.3
TMX3-210ENST00000569053 SLC52A1Q9NWF4 448 aa16.94■□□□□ 0.3
TMX3-210ENST00000569053 CHD2O14647 1828 aaKnown RBP16.93■□□□□ 0.3
TMX3-210ENST00000569053 POTEAQ6S8J7 498 aa16.93■□□□□ 0.3
TMX3-210ENST00000569053 RPRD2Q5VT52 1461 aaKnown RBP16.92■□□□□ 0.3
TMX3-210ENST00000569053 E9PCH4 1651 aa16.91■□□□□ 0.3
TMX3-210ENST00000569053 UNC13BO14795 1591 aa16.91■□□□□ 0.3
TMX3-210ENST00000569053 RIMS2Q9UQ26 1411 aa16.91■□□□□ 0.3
TMX3-210ENST00000569053 NUTM2DQ5VT03 806 aaPredicted RBP16.91■□□□□ 0.3
TMX3-210ENST00000569053 RNF39Q9H2S5 420 aa16.91■□□□□ 0.3
TMX3-210ENST00000569053 NKTRP30414 1462 aaKnown RBP16.91■□□□□ 0.3
TMX3-210ENST00000569053 PLEKHG1Q9ULL1 1385 aa16.9■□□□□ 0.3
TMX3-210ENST00000569053 DCAF8L1A6NGE4 600 aa16.9■□□□□ 0.3
TMX3-210ENST00000569053 ADAMTS13Q76LX8 1427 aa16.88■□□□□ 0.29
TMX3-210ENST00000569053 BCANQ96GW7 911 aa16.88■□□□□ 0.29
TMX3-210ENST00000569053 SLAIN2Q9P270 581 aa16.86■□□□□ 0.29
TMX3-210ENST00000569053 PHLPP1O60346 1717 aa16.85■□□□□ 0.29
TMX3-210ENST00000569053 TBX22Q9Y458 520 aa16.85■□□□□ 0.29
TMX3-210ENST00000569053 CHGAP10645 457 aaKnown RBP16.84■□□□□ 0.29
TMX3-210ENST00000569053 MSH6P52701 1360 aa16.84■□□□□ 0.29
TMX3-210ENST00000569053 PTPRUQ92729 1446 aa16.84■□□□□ 0.29
TMX3-210ENST00000569053 IQGAP3Q86VI3 1631 aa16.84■□□□□ 0.29
TMX3-210ENST00000569053 COL16A1Q07092 1604 aaPredicted RBP16.83■□□□□ 0.28
TMX3-210ENST00000569053 PPARGC1BQ86YN6 1023 aaKnown RBP16.82■□□□□ 0.28
TMX3-210ENST00000569053 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.82■□□□□ 0.28
TMX3-210ENST00000569053 ROCK1Q13464 1354 aa16.81■□□□□ 0.28
TMX3-210ENST00000569053 PPP1R15AO75807 674 aaPredicted RBP16.81■□□□□ 0.28
TMX3-210ENST00000569053 LRP6O75581 1613 aa16.81■□□□□ 0.28
TMX3-210ENST00000569053 SETD1AO15047 1707 aaKnown RBP16.8■□□□□ 0.28
TMX3-210ENST00000569053 NRXN3Q9Y4C0 1643 aa16.8■□□□□ 0.28
TMX3-210ENST00000569053 ITGAEP38570 1179 aa16.78■□□□□ 0.28
TMX3-210ENST00000569053 NUP155O75694 1391 aa16.77■□□□□ 0.28
TMX3-210ENST00000569053 JCADQ9P266 1359 aa16.77■□□□□ 0.28
TMX3-210ENST00000569053 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.77■□□□□ 0.28
TMX3-210ENST00000569053 AMOTL2Q9Y2J4 779 aa16.76■□□□□ 0.27
TMX3-210ENST00000569053 NCOA3Q9Y6Q9 1424 aa16.76■□□□□ 0.27
TMX3-210ENST00000569053 DIP2AQ14689 1571 aa16.76■□□□□ 0.27
TMX3-210ENST00000569053 HDGFP51858 240 aaKnown RBP16.75■□□□□ 0.27
TMX3-210ENST00000569053 AHDC1Q5TGY3 1603 aaPredicted RBP16.74■□□□□ 0.27
TMX3-210ENST00000569053 C19orf44Q9H6X5 657 aa16.73■□□□□ 0.27
TMX3-210ENST00000569053 PIK3R4Q99570 1358 aa16.73■□□□□ 0.27
TMX3-210ENST00000569053 XRN1Q8IZH2 1706 aaKnown RBP16.73■□□□□ 0.27
TMX3-210ENST00000569053 TRPM2O94759 1503 aa16.72■□□□□ 0.27
TMX3-210ENST00000569053 BRINP3Q76B58 766 aa16.72■□□□□ 0.27
TMX3-210ENST00000569053 SPHKAPQ2M3C7 1700 aa16.72■□□□□ 0.27
TMX3-210ENST00000569053 METP08581 1390 aa16.72■□□□□ 0.27
TMX3-210ENST00000569053 C14orf37Q86TY3 774 aa16.71■□□□□ 0.27
TMX3-210ENST00000569053 SHPRHQ149N8 1683 aa16.7■□□□□ 0.26
TMX3-210ENST00000569053 SETBP1Q9Y6X0 1596 aa16.7■□□□□ 0.26
TMX3-210ENST00000569053 CADPS2Q86UW7 1296 aa16.69■□□□□ 0.26
TMX3-210ENST00000569053 CLTCL1P53675 1640 aa16.69■□□□□ 0.26
TMX3-210ENST00000569053 ATF3P18847 181 aa16.68■□□□□ 0.26
TMX3-210ENST00000569053 DDX17Q92841 729 aaKnown RBP16.68■□□□□ 0.26
TMX3-210ENST00000569053 MST1RQ04912 1400 aa16.68■□□□□ 0.26
TMX3-210ENST00000569053 NEXMIFQ5QGS0 1516 aa16.67■□□□□ 0.26
TMX3-210ENST00000569053 SPATA31A6Q5VVP1 1343 aa16.67■□□□□ 0.26
TMX3-210ENST00000569053 HOXD11P31277 338 aaPredicted RBP16.66■□□□□ 0.26
TMX3-210ENST00000569053 ASXL1Q8IXJ9 1541 aa16.65■□□□□ 0.26
TMX3-210ENST00000569053 KCNA4P22459 653 aa16.65■□□□□ 0.26
TMX3-210ENST00000569053 NHSL1Q5SYE7 1610 aa16.64■□□□□ 0.25
TMX3-210ENST00000569053 NALCNQ8IZF0 1738 aa16.64■□□□□ 0.25
TMX3-210ENST00000569053 NUTM2BA6NNL0 878 aaPredicted RBP16.63■□□□□ 0.25
TMX3-210ENST00000569053 NUTM2EB1AL46 878 aaPredicted RBP16.63■□□□□ 0.25
TMX3-210ENST00000569053 ZNF326Q5BKZ1 582 aaKnown RBP16.63■□□□□ 0.25
TMX3-210ENST00000569053 NUTM2AQ8IVF1 878 aaPredicted RBP16.63■□□□□ 0.25
TMX3-210ENST00000569053 DCCP43146 1447 aa16.62■□□□□ 0.25
TMX3-210ENST00000569053 NAIPQ13075 1403 aa16.62■□□□□ 0.25
TMX3-210ENST00000569053 TRIM52Q96A61 297 aa16.62■□□□□ 0.25
TMX3-210ENST00000569053 SETD5Q9C0A6 1442 aa16.62■□□□□ 0.25
TMX3-210ENST00000569053 MEX3CQ5U5Q3 659 aaKnown RBP16.61■□□□□ 0.25
TMX3-210ENST00000569053 UPF1Q92900 1129 aaKnown RBP eCLIP16.61■□□□□ 0.25
TMX3-210ENST00000569053 C1QBPQ07021 282 aaKnown RBP16.6■□□□□ 0.25
TMX3-210ENST00000569053 ADGRL3Q9HAR2 1447 aa16.6■□□□□ 0.25
TMX3-210ENST00000569053 RRBP1Q9P2E9 1410 aaKnown RBP16.6■□□□□ 0.25
TMX3-210ENST00000569053 ZNF772Q68DY9 489 aaPredicted RBP16.59■□□□□ 0.25
TMX3-210ENST00000569053 KIF1BO60333 1816 aa16.58■□□□□ 0.24
TMX3-210ENST00000569053 PNPLA6Q8IY17 1366 aa16.57■□□□□ 0.24
TMX3-210ENST00000569053 ROBO2Q9HCK4 1378 aa16.57■□□□□ 0.24
TMX3-210ENST00000569053 AFF2P51816 1311 aa16.57■□□□□ 0.24
TMX3-210ENST00000569053 C1orf167Q5SNV9 1468 aa16.55■□□□□ 0.24
TMX3-210ENST00000569053 RXRBP28702 533 aa16.54■□□□□ 0.24
TMX3-210ENST00000569053 ORAI2Q96SN7 254 aa16.54■□□□□ 0.24
TMX3-210ENST00000569053 LAMC1P11047 1609 aa16.53■□□□□ 0.24
TMX3-210ENST00000569053 LRRC59Q96AG4 307 aaKnown RBP16.53■□□□□ 0.24
TMX3-210ENST00000569053 PPLO60437 1756 aa16.51■□□□□ 0.23
TMX3-210ENST00000569053 RGS12O14924 1447 aa16.51■□□□□ 0.23
TMX3-210ENST00000569053 PTCH1Q13635 1447 aa16.51■□□□□ 0.23
TMX3-210ENST00000569053 CDK12Q9NYV4 1490 aaPredicted RBP16.5■□□□□ 0.23
TMX3-210ENST00000569053 C8orf37Q96NL8 207 aa16.5■□□□□ 0.23
TMX3-210ENST00000569053 HFM1A2PYH4 1435 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms