RNA–Protein interactions for RNA: ENST00000568080.1

GSE1-213, Transcript of Gse1 coiled-coil protein, humanhuman

TSL 5

Gene GSE1, Length 289 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSE1-213ENST00000568080 SENP3Q9H4L4 574 aaPredicted RBP22.47■■□□□ 1.19
GSE1-213ENST00000568080 TMEM131LA2VDJ0 1609 aa22.45■■□□□ 1.18
GSE1-213ENST00000568080 RIMS2Q9UQ26 1411 aa22.43■■□□□ 1.18
GSE1-213ENST00000568080 HSPA1LP34931 641 aa22.42■■□□□ 1.18
GSE1-213ENST00000568080 ZFYVE9O95405 1425 aa22.4■■□□□ 1.18
GSE1-213ENST00000568080 KCNA6P17658 529 aa22.4■■□□□ 1.18
GSE1-213ENST00000568080 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.4■■□□□ 1.18
GSE1-213ENST00000568080 NAIPQ13075 1403 aa22.39■■□□□ 1.17
GSE1-213ENST00000568080 PLEKHG1Q9ULL1 1385 aa22.38■■□□□ 1.17
GSE1-213ENST00000568080 SPHKAPQ2M3C7 1700 aa22.38■■□□□ 1.17
GSE1-213ENST00000568080 NUTM2DQ5VT03 806 aaPredicted RBP22.38■■□□□ 1.17
GSE1-213ENST00000568080 XIRP1Q702N8 1843 aaKnown RBP22.38■■□□□ 1.17
GSE1-213ENST00000568080 PROSER2Q86WR7 435 aaPredicted RBP22.37■■□□□ 1.17
GSE1-213ENST00000568080 ALKQ9UM73 1620 aa22.37■■□□□ 1.17
GSE1-213ENST00000568080 TRIM52Q96A61 297 aa22.36■■□□□ 1.17
GSE1-213ENST00000568080 TMEM94Q12767 1356 aa22.35■■□□□ 1.17
GSE1-213ENST00000568080 RBM33Q96EV2 1170 aaKnown RBP22.33■■□□□ 1.17
GSE1-213ENST00000568080 ZNF326Q5BKZ1 582 aaKnown RBP22.32■■□□□ 1.16
GSE1-213ENST00000568080 NKTRP30414 1462 aaKnown RBP22.32■■□□□ 1.16
GSE1-213ENST00000568080 HFM1A2PYH4 1435 aa22.31■■□□□ 1.16
GSE1-213ENST00000568080 NWD1Q149M9 1564 aa22.31■■□□□ 1.16
GSE1-213ENST00000568080 CHD2O14647 1828 aaKnown RBP22.3■■□□□ 1.16
GSE1-213ENST00000568080 TBX22Q9Y458 520 aa22.3■■□□□ 1.16
GSE1-213ENST00000568080 ILDR2Q71H61 639 aa22.27■■□□□ 1.16
GSE1-213ENST00000568080 DIP2AQ14689 1571 aa22.26■■□□□ 1.15
GSE1-213ENST00000568080 MSH6P52701 1360 aa22.25■■□□□ 1.15
GSE1-213ENST00000568080 SLC4A1APQ9BWU0 796 aaKnown RBP22.25■■□□□ 1.15
GSE1-213ENST00000568080 TRPM2O94759 1503 aa22.25■■□□□ 1.15
GSE1-213ENST00000568080 KIF1BO60333 1816 aa22.24■■□□□ 1.15
GSE1-213ENST00000568080 CLTCL1P53675 1640 aa22.24■■□□□ 1.15
GSE1-213ENST00000568080 ADAMTS13Q76LX8 1427 aa22.24■■□□□ 1.15
GSE1-213ENST00000568080 C14orf37Q86TY3 774 aa22.24■■□□□ 1.15
GSE1-213ENST00000568080 MED1Q15648 1581 aaPredicted RBP22.22■■□□□ 1.15
GSE1-213ENST00000568080 PIK3R4Q99570 1358 aa22.21■■□□□ 1.15
GSE1-213ENST00000568080 FAM135BQ49AJ0 1406 aa22.2■■□□□ 1.14
GSE1-213ENST00000568080 ROBO1Q9Y6N7 1651 aa22.18■■□□□ 1.14
GSE1-213ENST00000568080 PHF23Q9BUL5 403 aaPredicted RBP22.17■■□□□ 1.14
GSE1-213ENST00000568080 AMOTL2Q9Y2J4 779 aa22.17■■□□□ 1.14
GSE1-213ENST00000568080 SETBP1Q9Y6X0 1596 aa22.16■■□□□ 1.14
GSE1-213ENST00000568080 SLAIN2Q9P270 581 aa22.15■■□□□ 1.14
GSE1-213ENST00000568080 NEXMIFQ5QGS0 1516 aa22.15■■□□□ 1.14
GSE1-213ENST00000568080 NCOA3Q9Y6Q9 1424 aa22.14■■□□□ 1.14
GSE1-213ENST00000568080 NRXN3Q9Y4C0 1643 aa22.14■■□□□ 1.14
GSE1-213ENST00000568080 ATF3P18847 181 aa22.12■■□□□ 1.13
GSE1-213ENST00000568080 FOXD1Q16676 465 aa22.12■■□□□ 1.13
GSE1-213ENST00000568080 PTPRUQ92729 1446 aa22.12■■□□□ 1.13
GSE1-213ENST00000568080 SOCS7O14512 581 aa22.11■■□□□ 1.13
GSE1-213ENST00000568080 C19orf44Q9H6X5 657 aa22.11■■□□□ 1.13
GSE1-213ENST00000568080 VGFO15240 615 aaPredicted RBP22.1■■□□□ 1.13
GSE1-213ENST00000568080 CADPS2Q86UW7 1296 aa22.1■■□□□ 1.13
GSE1-213ENST00000568080 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.09■■□□□ 1.13
GSE1-213ENST00000568080 METP08581 1390 aa22.09■■□□□ 1.13
GSE1-213ENST00000568080 MPHOSPH9Q99550 1183 aa22.08■■□□□ 1.13
GSE1-213ENST00000568080 RPGRIP1LQ68CZ1 1315 aa22.07■■□□□ 1.12
GSE1-213ENST00000568080 PHLPP1O60346 1717 aa22.07■■□□□ 1.12
GSE1-213ENST00000568080 XRN1Q8IZH2 1706 aaKnown RBP22.07■■□□□ 1.12
GSE1-213ENST00000568080 CCDC144AA2RUR9 1427 aa22.06■■□□□ 1.12
GSE1-213ENST00000568080 ACIN1Q9UKV3 1341 aaKnown RBP22.05■■□□□ 1.12
GSE1-213ENST00000568080 SETD5Q9C0A6 1442 aa22.04■■□□□ 1.12
GSE1-213ENST00000568080 PPLO60437 1756 aa22.03■■□□□ 1.12
GSE1-213ENST00000568080 RGL3Q3MIN7 710 aa22.01■■□□□ 1.11
GSE1-213ENST00000568080 DCCP43146 1447 aa21.98■■□□□ 1.11
GSE1-213ENST00000568080 JCADQ9P266 1359 aa21.97■■□□□ 1.11
GSE1-213ENST00000568080 SETD1AO15047 1707 aaKnown RBP21.97■■□□□ 1.11
GSE1-213ENST00000568080 RAB3GAP2Q9H2M9 1393 aa21.96■■□□□ 1.11
GSE1-213ENST00000568080 ADGRL3Q9HAR2 1447 aa21.95■■□□□ 1.1
GSE1-213ENST00000568080 COL16A1Q07092 1604 aaPredicted RBP21.95■■□□□ 1.1
GSE1-213ENST00000568080 BRINP3Q76B58 766 aa21.94■■□□□ 1.1
GSE1-213ENST00000568080 NALCNQ8IZF0 1738 aa21.94■■□□□ 1.1
GSE1-213ENST00000568080 PTCH1Q13635 1447 aa21.93■■□□□ 1.1
GSE1-213ENST00000568080 SPATA31E1Q6ZUB1 1445 aa21.93■■□□□ 1.1
GSE1-213ENST00000568080 AHDC1Q5TGY3 1603 aaPredicted RBP21.92■■□□□ 1.1
GSE1-213ENST00000568080 ANKRD30BQ9BXX2 1392 aa21.92■■□□□ 1.1
GSE1-213ENST00000568080 ADGRF5Q8IZF2 1346 aa21.92■■□□□ 1.1
GSE1-213ENST00000568080 MST1RQ04912 1400 aa21.91■■□□□ 1.1
GSE1-213ENST00000568080 ROBO2Q9HCK4 1378 aa21.9■■□□□ 1.1
GSE1-213ENST00000568080 IFT172Q9UG01 1749 aa21.9■■□□□ 1.1
GSE1-213ENST00000568080 ASXL1Q8IXJ9 1541 aa21.9■■□□□ 1.1
GSE1-213ENST00000568080 RGS17Q9UGC6 210 aaPredicted RBP21.89■■□□□ 1.09
GSE1-213ENST00000568080 MEX3CQ5U5Q3 659 aaKnown RBP21.87■■□□□ 1.09
GSE1-213ENST00000568080 STK26Q9P289 416 aa21.87■■□□□ 1.09
GSE1-213ENST00000568080 SPATA31A6Q5VVP1 1343 aa21.86■■□□□ 1.09
GSE1-213ENST00000568080 SHPRHQ149N8 1683 aa21.85■■□□□ 1.09
GSE1-213ENST00000568080 PRAG1Q86YV5 1406 aa21.84■■□□□ 1.09
GSE1-213ENST00000568080 NHSL1Q5SYE7 1610 aa21.84■■□□□ 1.09
GSE1-213ENST00000568080 PIK3C2GO75747 1445 aa21.82■■□□□ 1.08
GSE1-213ENST00000568080 TMEM132EQ6IEE7 984 aa21.82■■□□□ 1.08
GSE1-213ENST00000568080 C1orf167Q5SNV9 1468 aa21.82■■□□□ 1.08
GSE1-213ENST00000568080 NUTM2BA6NNL0 878 aaPredicted RBP21.81■■□□□ 1.08
GSE1-213ENST00000568080 NUTM2EB1AL46 878 aaPredicted RBP21.81■■□□□ 1.08
GSE1-213ENST00000568080 NUTM2AQ8IVF1 878 aaPredicted RBP21.81■■□□□ 1.08
GSE1-213ENST00000568080 DDX17Q92841 729 aaKnown RBP21.81■■□□□ 1.08
GSE1-213ENST00000568080 LRRC59Q96AG4 307 aaKnown RBP21.81■■□□□ 1.08
GSE1-213ENST00000568080 POTEAQ6S8J7 498 aa21.8■■□□□ 1.08
GSE1-213ENST00000568080 LRPPRCP42704 1394 aaKnown RBP21.79■■□□□ 1.08
GSE1-213ENST00000568080 LRP6O75581 1613 aa21.79■■□□□ 1.08
GSE1-213ENST00000568080 WAPLQ7Z5K2 1190 aa21.78■■□□□ 1.08
GSE1-213ENST00000568080 ORAI2Q96SN7 254 aa21.77■■□□□ 1.08
GSE1-213ENST00000568080 TECPR2O15040 1411 aa21.76■■□□□ 1.07
GSE1-213ENST00000568080 HRCP23327 699 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms