RNA–Protein interactions for RNA: ENST00000567879.5

FANCA-226, Transcript of FA complementation group A, humanhuman

APPRIS ALT2 TSL 3

Gene FANCA, Length 713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-226ENST00000567879 ALKQ9UM73 1620 aa20.51■□□□□ 0.87
FANCA-226ENST00000567879 TRIM52Q96A61 297 aa20.5■□□□□ 0.87
FANCA-226ENST00000567879 NWD1Q149M9 1564 aa20.5■□□□□ 0.87
FANCA-226ENST00000567879 KIF1BO60333 1816 aa20.49■□□□□ 0.87
FANCA-226ENST00000567879 CHD2O14647 1828 aaKnown RBP20.48■□□□□ 0.87
FANCA-226ENST00000567879 CHGAP10645 457 aaKnown RBP20.48■□□□□ 0.87
FANCA-226ENST00000567879 HDGFP51858 240 aaKnown RBP20.48■□□□□ 0.87
FANCA-226ENST00000567879 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.48■□□□□ 0.87
FANCA-226ENST00000567879 UBAP1LF5GYI3 381 aa20.47■□□□□ 0.87
FANCA-226ENST00000567879 SLC26A8Q96RN1 970 aa20.47■□□□□ 0.87
FANCA-226ENST00000567879 SLC4A1APQ9BWU0 796 aaKnown RBP20.46■□□□□ 0.87
FANCA-226ENST00000567879 ADAMTS13Q76LX8 1427 aa20.45■□□□□ 0.86
FANCA-226ENST00000567879 SETD5Q9C0A6 1442 aa20.45■□□□□ 0.86
FANCA-226ENST00000567879 KCNA6P17658 529 aa20.45■□□□□ 0.86
FANCA-226ENST00000567879 DIP2AQ14689 1571 aa20.45■□□□□ 0.86
FANCA-226ENST00000567879 NRXN3Q9Y4C0 1643 aa20.44■□□□□ 0.86
FANCA-226ENST00000567879 NEXMIFQ5QGS0 1516 aa20.43■□□□□ 0.86
FANCA-226ENST00000567879 NKTRP30414 1462 aaKnown RBP20.43■□□□□ 0.86
FANCA-226ENST00000567879 PPP1R15AO75807 674 aaPredicted RBP20.42■□□□□ 0.86
FANCA-226ENST00000567879 TBX22Q9Y458 520 aa20.42■□□□□ 0.86
FANCA-226ENST00000567879 SETBP1Q9Y6X0 1596 aa20.42■□□□□ 0.86
FANCA-226ENST00000567879 NUTM2DQ5VT03 806 aaPredicted RBP20.41■□□□□ 0.86
FANCA-226ENST00000567879 TOM1O60784 492 aa20.4■□□□□ 0.86
FANCA-226ENST00000567879 MPHOSPH9Q99550 1183 aa20.4■□□□□ 0.86
FANCA-226ENST00000567879 ACIN1Q9UKV3 1341 aaKnown RBP20.4■□□□□ 0.86
FANCA-226ENST00000567879 PIK3R4Q99570 1358 aa20.37■□□□□ 0.85
FANCA-226ENST00000567879 RAB3GAP2Q9H2M9 1393 aa20.37■□□□□ 0.85
FANCA-226ENST00000567879 FOXD1Q16676 465 aa20.37■□□□□ 0.85
FANCA-226ENST00000567879 PPLO60437 1756 aa20.36■□□□□ 0.85
FANCA-226ENST00000567879 TMEM94Q12767 1356 aa20.36■□□□□ 0.85
FANCA-226ENST00000567879 BCANQ96GW7 911 aa20.36■□□□□ 0.85
FANCA-226ENST00000567879 SENP3Q9H4L4 574 aaPredicted RBP20.36■□□□□ 0.85
FANCA-226ENST00000567879 ZNF326Q5BKZ1 582 aaKnown RBP20.34■□□□□ 0.85
FANCA-226ENST00000567879 PTPRUQ92729 1446 aa20.34■□□□□ 0.85
FANCA-226ENST00000567879 SETD1AO15047 1707 aaKnown RBP20.33■□□□□ 0.84
FANCA-226ENST00000567879 XRN1Q8IZH2 1706 aaKnown RBP20.33■□□□□ 0.84
FANCA-226ENST00000567879 PROSER2Q86WR7 435 aaPredicted RBP20.32■□□□□ 0.84
FANCA-226ENST00000567879 IFT172Q9UG01 1749 aa20.31■□□□□ 0.84
FANCA-226ENST00000567879 CCDC144AA2RUR9 1427 aa20.31■□□□□ 0.84
FANCA-226ENST00000567879 SPATA31E1Q6ZUB1 1445 aa20.31■□□□□ 0.84
FANCA-226ENST00000567879 RPGRIP1LQ68CZ1 1315 aa20.3■□□□□ 0.84
FANCA-226ENST00000567879 NCOA3Q9Y6Q9 1424 aa20.3■□□□□ 0.84
FANCA-226ENST00000567879 HRCP23327 699 aa20.3■□□□□ 0.84
FANCA-226ENST00000567879 PIP4K2BP78356 416 aa20.3■□□□□ 0.84
FANCA-226ENST00000567879 RBM33Q96EV2 1170 aaKnown RBP20.28■□□□□ 0.84
FANCA-226ENST00000567879 METP08581 1390 aa20.27■□□□□ 0.84
FANCA-226ENST00000567879 VGFO15240 615 aaPredicted RBP20.26■□□□□ 0.83
FANCA-226ENST00000567879 HSPA1LP34931 641 aa20.26■□□□□ 0.83
FANCA-226ENST00000567879 SCAF1Q9H7N4 1312 aaKnown RBP20.26■□□□□ 0.83
FANCA-226ENST00000567879 AMOTL2Q9Y2J4 779 aa20.25■□□□□ 0.83
FANCA-226ENST00000567879 FAM135BQ49AJ0 1406 aa20.24■□□□□ 0.83
FANCA-226ENST00000567879 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.23■□□□□ 0.83
FANCA-226ENST00000567879 MSH6P52701 1360 aa20.22■□□□□ 0.83
FANCA-226ENST00000567879 PRAG1Q86YV5 1406 aa20.21■□□□□ 0.83
FANCA-226ENST00000567879 ROBO1Q9Y6N7 1651 aa20.21■□□□□ 0.83
FANCA-226ENST00000567879 ANKRD30BQ9BXX2 1392 aa20.21■□□□□ 0.83
FANCA-226ENST00000567879 ADGRF5Q8IZF2 1346 aa20.18■□□□□ 0.82
FANCA-226ENST00000567879 RGL3Q3MIN7 710 aa20.17■□□□□ 0.82
FANCA-226ENST00000567879 C19orf44Q9H6X5 657 aa20.16■□□□□ 0.82
FANCA-226ENST00000567879 PTCH1Q13635 1447 aa20.16■□□□□ 0.82
FANCA-226ENST00000567879 SLAIN2Q9P270 581 aa20.15■□□□□ 0.82
FANCA-226ENST00000567879 PIK3C2GO75747 1445 aa20.15■□□□□ 0.82
FANCA-226ENST00000567879 DCCP43146 1447 aa20.15■□□□□ 0.82
FANCA-226ENST00000567879 NRXN1Q9ULB1 1477 aa20.15■□□□□ 0.82
FANCA-226ENST00000567879 NALCNQ8IZF0 1738 aa20.15■□□□□ 0.82
FANCA-226ENST00000567879 ASXL1Q8IXJ9 1541 aa20.13■□□□□ 0.81
FANCA-226ENST00000567879 MYOM2P54296 1465 aa20.13■□□□□ 0.81
FANCA-226ENST00000567879 ADGRL3Q9HAR2 1447 aa20.11■□□□□ 0.81
FANCA-226ENST00000567879 ROBO2Q9HCK4 1378 aa20.11■□□□□ 0.81
FANCA-226ENST00000567879 CADPS2Q86UW7 1296 aa20.11■□□□□ 0.81
FANCA-226ENST00000567879 MED1Q15648 1581 aaPredicted RBP20.11■□□□□ 0.81
FANCA-226ENST00000567879 KNDC1Q76NI1 1749 aa20.1■□□□□ 0.81
FANCA-226ENST00000567879 DISP3Q9P2K9 1392 aa20.09■□□□□ 0.81
FANCA-226ENST00000567879 C14orf37Q86TY3 774 aa20.09■□□□□ 0.81
FANCA-226ENST00000567879 TECPR2O15040 1411 aa20.09■□□□□ 0.81
FANCA-226ENST00000567879 LAMC1P11047 1609 aa20.08■□□□□ 0.8
FANCA-226ENST00000567879 PHLPP1O60346 1717 aa20.07■□□□□ 0.8
FANCA-226ENST00000567879 ATF3P18847 181 aa20.07■□□□□ 0.8
FANCA-226ENST00000567879 MST1RQ04912 1400 aa20.07■□□□□ 0.8
FANCA-226ENST00000567879 AHDC1Q5TGY3 1603 aaPredicted RBP20.06■□□□□ 0.8
FANCA-226ENST00000567879 LRPPRCP42704 1394 aaKnown RBP20.06■□□□□ 0.8
FANCA-226ENST00000567879 COL16A1Q07092 1604 aaPredicted RBP20.05■□□□□ 0.8
FANCA-226ENST00000567879 C14orf93Q9H972 538 aaKnown RBP20.05■□□□□ 0.8
FANCA-226ENST00000567879 ABCC11Q96J66 1382 aa20.04■□□□□ 0.8
FANCA-226ENST00000567879 YTHDC2Q9H6S0 1430 aaKnown RBP20.02■□□□□ 0.79
FANCA-226ENST00000567879 DHX57Q6P158 1386 aaKnown RBP20.01■□□□□ 0.79
FANCA-226ENST00000567879 BRINP3Q76B58 766 aa20.01■□□□□ 0.79
FANCA-226ENST00000567879 NHSL1Q5SYE7 1610 aa20.01■□□□□ 0.79
FANCA-226ENST00000567879 TMEM132EQ6IEE7 984 aa20■□□□□ 0.79
FANCA-226ENST00000567879 CDC42BPGQ6DT37 1551 aa20■□□□□ 0.79
FANCA-226ENST00000567879 CFAP70Q5T0N1 1121 aa19.99■□□□□ 0.79
FANCA-226ENST00000567879 ADGRB1O14514 1584 aa19.99■□□□□ 0.79
FANCA-226ENST00000567879 ILDR2Q71H61 639 aa19.98■□□□□ 0.79
FANCA-226ENST00000567879 STAC3Q96MF2 364 aa19.98■□□□□ 0.79
FANCA-226ENST00000567879 C1orf167Q5SNV9 1468 aa19.98■□□□□ 0.79
FANCA-226ENST00000567879 SIRT1Q96EB6 747 aa19.97■□□□□ 0.79
FANCA-226ENST00000567879 STK26Q9P289 416 aa19.96■□□□□ 0.79
FANCA-226ENST00000567879 PLEKHH1Q9ULM0 1364 aa19.95■□□□□ 0.79
FANCA-226ENST00000567879 SHPRHQ149N8 1683 aa19.95■□□□□ 0.78
FANCA-226ENST00000567879 WAPLQ7Z5K2 1190 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms