RNA–Protein interactions for RNA: ENST00000567275.2

NIFKP4-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 4, humanhuman

BASIC

Gene NIFKP4, Length 1,192 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP4-201ENST00000567275 BCAMP50895 628 aa18.91■□□□□ 0.62
NIFKP4-201ENST00000567275 AK7Q96M32 723 aa18.91■□□□□ 0.62
NIFKP4-201ENST00000567275 PHOX2BQ99453 314 aa18.91■□□□□ 0.62
NIFKP4-201ENST00000567275 RNF40O75150 1001 aa18.9■□□□□ 0.62
NIFKP4-201ENST00000567275 NLRP7Q8WX94 980 aa18.88■□□□□ 0.61
NIFKP4-201ENST00000567275 PTPN5P54829 565 aa18.86■□□□□ 0.61
NIFKP4-201ENST00000567275 SLF2Q8IX21 1173 aa18.86■□□□□ 0.61
NIFKP4-201ENST00000567275 HPS5Q9UPZ3 1129 aa18.84■□□□□ 0.61
NIFKP4-201ENST00000567275 DAXXQ9UER7 740 aaPredicted RBP18.82■□□□□ 0.6
NIFKP4-201ENST00000567275 TSR3Q9UJK0 312 aaKnown RBP18.82■□□□□ 0.6
NIFKP4-201ENST00000567275 MDM2Q00987 491 aaPredicted RBP18.81■□□□□ 0.6
NIFKP4-201ENST00000567275 HCSTQ9UBK5 93 aa18.81■□□□□ 0.6
NIFKP4-201ENST00000567275 PPP4CP60510 307 aa18.8■□□□□ 0.6
NIFKP4-201ENST00000567275 TRIM66O15016 1216 aa18.79■□□□□ 0.6
NIFKP4-201ENST00000567275 NECTIN2Q92692 538 aa18.78■□□□□ 0.6
NIFKP4-201ENST00000567275 CLCN1P35523 988 aa18.76■□□□□ 0.59
NIFKP4-201ENST00000567275 TTLL12Q14166 644 aaPredicted RBP18.75■□□□□ 0.59
NIFKP4-201ENST00000567275 AMHR2Q16671 573 aa18.75■□□□□ 0.59
NIFKP4-201ENST00000567275 WBP1LQ9NX94 342 aa18.75■□□□□ 0.59
NIFKP4-201ENST00000567275 GPCPD1Q9NPB8 672 aa18.74■□□□□ 0.59
NIFKP4-201ENST00000567275 DDX11L8A8MPP1 907 aa18.73■□□□□ 0.59
NIFKP4-201ENST00000567275 RSPH4AQ5TD94 716 aa18.73■□□□□ 0.59
NIFKP4-201ENST00000567275 SULF1Q8IWU6 871 aa18.73■□□□□ 0.59
NIFKP4-201ENST00000567275 PRKCSHP14314 528 aaPredicted RBP18.71■□□□□ 0.59
NIFKP4-201ENST00000567275 NYAP1Q6ZVC0 841 aa18.7■□□□□ 0.58
NIFKP4-201ENST00000567275 RDH13Q8NBN7 331 aa18.7■□□□□ 0.58
NIFKP4-201ENST00000567275 PDE4DQ08499 809 aa18.68■□□□□ 0.58
NIFKP4-201ENST00000567275 SLC10A3P09131 477 aa18.66■□□□□ 0.58
NIFKP4-201ENST00000567275 PARP9Q8IXQ6 854 aa18.64■□□□□ 0.57
NIFKP4-201ENST00000567275 TMUB1Q9BVT8 246 aa18.64■□□□□ 0.57
NIFKP4-201ENST00000567275 REPIN1Q9BWE0 567 aaKnown RBP18.64■□□□□ 0.57
NIFKP4-201ENST00000567275 CFHP08603 1231 aa18.63■□□□□ 0.57
NIFKP4-201ENST00000567275 KMT5BQ4FZB7 885 aa18.62■□□□□ 0.57
NIFKP4-201ENST00000567275 GIGYF2Q6Y7W6 1299 aaKnown RBP18.62■□□□□ 0.57
NIFKP4-201ENST00000567275 PRR14Q9BWN1 585 aa18.62■□□□□ 0.57
NIFKP4-201ENST00000567275 FAM217BQ9NTX9 383 aaPredicted RBP18.62■□□□□ 0.57
NIFKP4-201ENST00000567275 APLP1P51693 650 aa18.59■□□□□ 0.57
NIFKP4-201ENST00000567275 SSTR3P32745 418 aaPredicted RBP18.58■□□□□ 0.56
NIFKP4-201ENST00000567275 CD46P15529 392 aa18.57■□□□□ 0.56
NIFKP4-201ENST00000567275 GCGRP47871 477 aa18.53■□□□□ 0.56
NIFKP4-201ENST00000567275 ACTN4O43707 911 aaKnown RBP18.51■□□□□ 0.55
NIFKP4-201ENST00000567275 PCDHB3Q9Y5E6 796 aa18.49■□□□□ 0.55
NIFKP4-201ENST00000567275 GPBP1L1Q9HC44 474 aaPredicted RBP18.48■□□□□ 0.55
NIFKP4-201ENST00000567275 MS4A1P11836 297 aa18.47■□□□□ 0.55
NIFKP4-201ENST00000567275 NEUROD2Q15784 382 aa18.46■□□□□ 0.55
NIFKP4-201ENST00000567275 BEGAINQ9BUH8 593 aa18.45■□□□□ 0.54
NIFKP4-201ENST00000567275 NUTM1Q86Y26 1132 aa18.44■□□□□ 0.54
NIFKP4-201ENST00000567275 KDM4CQ9H3R0 1056 aa18.44■□□□□ 0.54
NIFKP4-201ENST00000567275 KDM4AO75164 1064 aa18.43■□□□□ 0.54
NIFKP4-201ENST00000567275 FUT2Q10981 343 aa18.43■□□□□ 0.54
NIFKP4-201ENST00000567275 COPS2P61201 443 aa18.42■□□□□ 0.54
NIFKP4-201ENST00000567275 MTRQ99707 1265 aa18.42■□□□□ 0.54
NIFKP4-201ENST00000567275 GRIPAP1Q4V328 841 aa18.41■□□□□ 0.54
NIFKP4-201ENST00000567275 ATP6V1AP38606 617 aa18.39■□□□□ 0.53
NIFKP4-201ENST00000567275 PUS10Q3MIT2 529 aaKnown RBP18.39■□□□□ 0.53
NIFKP4-201ENST00000567275 BLOC1S3Q6QNY0 202 aa18.39■□□□□ 0.53
NIFKP4-201ENST00000567275 IL21Q9HBE4 155 aa18.39■□□□□ 0.53
NIFKP4-201ENST00000567275 USP46P62068 366 aa18.38■□□□□ 0.53
NIFKP4-201ENST00000567275 PLA2G2EQ9NZK7 142 aa18.38■□□□□ 0.53
NIFKP4-201ENST00000567275 KCNC4Q03721 635 aa18.37■□□□□ 0.53
NIFKP4-201ENST00000567275 TJAP1Q5JTD0 557 aa18.37■□□□□ 0.53
NIFKP4-201ENST00000567275 ITGBL1O95965 494 aaPredicted RBP18.36■□□□□ 0.53
NIFKP4-201ENST00000567275 BRPF1P55201 1214 aaPredicted RBP18.36■□□□□ 0.53
NIFKP4-201ENST00000567275 NR1I2O75469 434 aa18.35■□□□□ 0.53
NIFKP4-201ENST00000567275 SPIRE2Q8WWL2 714 aa18.33■□□□□ 0.52
NIFKP4-201ENST00000567275 DIXDC1Q155Q3 683 aa18.32■□□□□ 0.52
NIFKP4-201ENST00000567275 MORN1Q5T089 497 aa18.32■□□□□ 0.52
NIFKP4-201ENST00000567275 HOXA2O43364 376 aa18.3■□□□□ 0.52
NIFKP4-201ENST00000567275 ZNF516Q92618 1163 aa18.3■□□□□ 0.52
NIFKP4-201ENST00000567275 ZPR1O75312 459 aa18.29■□□□□ 0.52
NIFKP4-201ENST00000567275 DDRGK1Q96HY6 314 aa18.29■□□□□ 0.52
NIFKP4-201ENST00000567275 TBC1D2Q9BYX2 928 aa18.29■□□□□ 0.52
NIFKP4-201ENST00000567275 FAM117AQ9C073 453 aa18.29■□□□□ 0.52
NIFKP4-201ENST00000567275 SCUBE3Q8IX30 993 aa18.28■□□□□ 0.52
NIFKP4-201ENST00000567275 SLC27A5Q9Y2P5 690 aa18.26■□□□□ 0.51
NIFKP4-201ENST00000567275 HLA-CQ95604 372 aa18.24■□□□□ 0.51
NIFKP4-201ENST00000567275 MOXD2PA6NHM9 499 aa18.22■□□□□ 0.51
NIFKP4-201ENST00000567275 IFFO2Q5TF58 517 aa18.22■□□□□ 0.51
NIFKP4-201ENST00000567275 NDUFV2P19404 249 aa18.21■□□□□ 0.51
NIFKP4-201ENST00000567275 GUCA2AQ02747 115 aa18.21■□□□□ 0.51
NIFKP4-201ENST00000567275 RSPH6AQ9H0K4 717 aa18.21■□□□□ 0.51
NIFKP4-201ENST00000567275 FDX1P10109 184 aa18.2■□□□□ 0.5
NIFKP4-201ENST00000567275 Q3C1V9 767 aa18.2■□□□□ 0.5
NIFKP4-201ENST00000567275 TLL1O43897 1013 aa18.19■□□□□ 0.5
NIFKP4-201ENST00000567275 NKX2-3Q8TAU0 364 aa18.19■□□□□ 0.5
NIFKP4-201ENST00000567275 FMNL1O95466 1100 aaPredicted RBP18.18■□□□□ 0.5
NIFKP4-201ENST00000567275 MYSM1Q5VVJ2 828 aa18.17■□□□□ 0.5
NIFKP4-201ENST00000567275 IL27Q8NEV9 243 aa18.17■□□□□ 0.5
NIFKP4-201ENST00000567275 PLEKHG3A1L390 1219 aa18.16■□□□□ 0.5
NIFKP4-201ENST00000567275 SPSB2Q99619 263 aa18.16■□□□□ 0.5
NIFKP4-201ENST00000567275 ADH1BP00325 375 aa18.15■□□□□ 0.5
NIFKP4-201ENST00000567275 RIC3Q7Z5B4 369 aa18.15■□□□□ 0.5
NIFKP4-201ENST00000567275 SALL2Q9Y467 1007 aaPredicted RBP18.15■□□□□ 0.5
NIFKP4-201ENST00000567275 RSBN1LQ6PCB5 846 aaPredicted RBP18.14■□□□□ 0.49
NIFKP4-201ENST00000567275 RNF19BQ6ZMZ0 732 aa18.13■□□□□ 0.49
NIFKP4-201ENST00000567275 GJA5P36382 358 aa18.12■□□□□ 0.49
NIFKP4-201ENST00000567275 BRICD5Q6PL45 260 aa18.12■□□□□ 0.49
NIFKP4-201ENST00000567275 THAP11Q96EK4 314 aa18.12■□□□□ 0.49
NIFKP4-201ENST00000567275 SPTLC1O15269 473 aa18.11■□□□□ 0.49
NIFKP4-201ENST00000567275 PCDHGC3Q9UN70 934 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms