RNA–Protein interactions for RNA: ENST00000566510.5

CDH1-209, Transcript of cadherin 1, humanhuman

TSL 5

Gene CDH1, Length 2,661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-209ENST00000566510 NEFMP07197 916 aa18.64■□□□□ 0.57
CDH1-209ENST00000566510 SCAF11Q99590 1463 aaKnown RBP18.64■□□□□ 0.57
CDH1-209ENST00000566510 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.63■□□□□ 0.57
CDH1-209ENST00000566510 ABCC1P33527 1531 aa18.63■□□□□ 0.57
CDH1-209ENST00000566510 ZCCHC11Q5TAX3 1644 aaKnown RBP18.62■□□□□ 0.57
CDH1-209ENST00000566510 IQGAP1P46940 1657 aa18.62■□□□□ 0.57
CDH1-209ENST00000566510 KIF3BO15066 747 aa18.61■□□□□ 0.57
CDH1-209ENST00000566510 APAF1O14727 1248 aa18.61■□□□□ 0.57
CDH1-209ENST00000566510 ASXL1Q8IXJ9 1541 aa18.6■□□□□ 0.57
CDH1-209ENST00000566510 CFAP70Q5T0N1 1121 aa18.6■□□□□ 0.57
CDH1-209ENST00000566510 CENPQQ7L2Z9 268 aaPredicted RBP18.6■□□□□ 0.57
CDH1-209ENST00000566510 EIF3AQ14152 1382 aaKnown RBP18.6■□□□□ 0.57
CDH1-209ENST00000566510 TRPM2O94759 1503 aa18.59■□□□□ 0.57
CDH1-209ENST00000566510 KANK1Q14678 1352 aa18.58■□□□□ 0.57
CDH1-209ENST00000566510 SLFN5Q08AF3 891 aa18.58■□□□□ 0.57
CDH1-209ENST00000566510 SPHKAPQ2M3C7 1700 aa18.58■□□□□ 0.57
CDH1-209ENST00000566510 CLTCL1P53675 1640 aa18.58■□□□□ 0.57
CDH1-209ENST00000566510 SYNMO15061 1565 aa18.58■□□□□ 0.57
CDH1-209ENST00000566510 ZNF521Q96K83 1311 aa18.58■□□□□ 0.56
CDH1-209ENST00000566510 CEP152O94986 1710 aa18.58■□□□□ 0.56
CDH1-209ENST00000566510 KDM2BQ8NHM5 1336 aa18.58■□□□□ 0.56
CDH1-209ENST00000566510 RGS3P49796 1198 aa18.57■□□□□ 0.56
CDH1-209ENST00000566510 DDRGK1Q96HY6 314 aa18.57■□□□□ 0.56
CDH1-209ENST00000566510 STAC3Q96MF2 364 aa18.57■□□□□ 0.56
CDH1-209ENST00000566510 DAXXQ9UER7 740 aaPredicted RBP18.57■□□□□ 0.56
CDH1-209ENST00000566510 SPINK5Q9NQ38 1064 aaPredicted RBP18.57■□□□□ 0.56
CDH1-209ENST00000566510 SLC4A3P48751 1232 aa18.56■□□□□ 0.56
CDH1-209ENST00000566510 SCAPERQ9BY12 1400 aa18.56■□□□□ 0.56
CDH1-209ENST00000566510 BCAR3O75815 825 aa18.55■□□□□ 0.56
CDH1-209ENST00000566510 PIK3C2GO75747 1445 aa18.54■□□□□ 0.56
CDH1-209ENST00000566510 PPM1GO15355 546 aaPredicted RBP18.54■□□□□ 0.56
CDH1-209ENST00000566510 PTPRTO14522 1441 aa18.54■□□□□ 0.56
CDH1-209ENST00000566510 CHGAP10645 457 aaKnown RBP18.53■□□□□ 0.56
CDH1-209ENST00000566510 ZFYVE16Q7Z3T8 1539 aa18.53■□□□□ 0.56
CDH1-209ENST00000566510 ADGRF5Q8IZF2 1346 aa18.53■□□□□ 0.56
CDH1-209ENST00000566510 RTEL1-TNFRSF6BF6WH68 1400 aa18.53■□□□□ 0.56
CDH1-209ENST00000566510 TNNT2P45379 298 aaPredicted RBP18.52■□□□□ 0.56
CDH1-209ENST00000566510 KDM5AP29375 1690 aaKnown RBP18.52■□□□□ 0.56
CDH1-209ENST00000566510 MYOM1P52179 1685 aa18.52■□□□□ 0.56
CDH1-209ENST00000566510 FAM161AQ3B820 660 aa18.51■□□□□ 0.55
CDH1-209ENST00000566510 CARD14Q9BXL6 1004 aa18.51■□□□□ 0.55
CDH1-209ENST00000566510 NEUROD2Q15784 382 aa18.5■□□□□ 0.55
CDH1-209ENST00000566510 USP35Q9P2H5 1018 aa18.5■□□□□ 0.55
CDH1-209ENST00000566510 UGGT1Q9NYU2 1555 aa18.5■□□□□ 0.55
CDH1-209ENST00000566510 TET3O43151 1660 aa18.5■□□□□ 0.55
CDH1-209ENST00000566510 CANXP27824 592 aaKnown RBP18.49■□□□□ 0.55
CDH1-209ENST00000566510 NKTRP30414 1462 aaKnown RBP18.49■□□□□ 0.55
CDH1-209ENST00000566510 E9PSI1 815 aa18.49■□□□□ 0.55
CDH1-209ENST00000566510 DMRT2Q9Y5R5 561 aa18.49■□□□□ 0.55
CDH1-209ENST00000566510 NPC1L1Q9UHC9 1359 aa18.49■□□□□ 0.55
CDH1-209ENST00000566510 TRMT2AQ8IZ69 625 aaKnown RBP18.48■□□□□ 0.55
CDH1-209ENST00000566510 FANCAO15360 1455 aa18.48■□□□□ 0.55
CDH1-209ENST00000566510 C8orf34Q49A92 452 aa18.47■□□□□ 0.55
CDH1-209ENST00000566510 ATP7AQ04656 1500 aa18.47■□□□□ 0.55
CDH1-209ENST00000566510 UHRF1BP1LA0JNW5 1464 aa18.47■□□□□ 0.55
CDH1-209ENST00000566510 SLC24A1O60721 1099 aa18.47■□□□□ 0.55
CDH1-209ENST00000566510 ERVK-7P63135 1459 aa18.46■□□□□ 0.55
CDH1-209ENST00000566510 DEPDC5O75140 1603 aa18.46■□□□□ 0.55
CDH1-209ENST00000566510 TRAK1Q9UPV9 953 aa18.46■□□□□ 0.54
CDH1-209ENST00000566510 CLASP1Q7Z460 1538 aa18.45■□□□□ 0.54
CDH1-209ENST00000566510 AEBP2Q6ZN18 517 aaPredicted RBP18.45■□□□□ 0.54
CDH1-209ENST00000566510 FRAT1Q92837 279 aaPredicted RBP18.44■□□□□ 0.54
CDH1-209ENST00000566510 RRP7AQ9Y3A4 280 aaKnown RBP18.44■□□□□ 0.54
CDH1-209ENST00000566510 CFAP65Q6ZU64 1925 aaKnown RBP18.44■□□□□ 0.54
CDH1-209ENST00000566510 MORC1Q86VD1 984 aa18.44■□□□□ 0.54
CDH1-209ENST00000566510 MAP3K4Q9Y6R4 1608 aa18.43■□□□□ 0.54
CDH1-209ENST00000566510 ABCA6Q8N139 1617 aa18.43■□□□□ 0.54
CDH1-209ENST00000566510 ADGRL1O94910 1474 aa18.43■□□□□ 0.54
CDH1-209ENST00000566510 KIF1BO60333 1816 aa18.42■□□□□ 0.54
CDH1-209ENST00000566510 CENPJQ9HC77 1338 aaPredicted RBP18.42■□□□□ 0.54
CDH1-209ENST00000566510 WWC1Q8IX03 1113 aa18.42■□□□□ 0.54
CDH1-209ENST00000566510 KIAA1210Q9ULL0 1709 aa18.42■□□□□ 0.54
CDH1-209ENST00000566510 IGHDP01880 384 aa18.42■□□□□ 0.54
CDH1-209ENST00000566510 PANK1Q8TE04 598 aa18.42■□□□□ 0.54
CDH1-209ENST00000566510 COG6Q9Y2V7 657 aa18.42■□□□□ 0.54
CDH1-209ENST00000566510 NFKBIBQ15653 356 aa18.41■□□□□ 0.54
CDH1-209ENST00000566510 SLC12A5Q9H2X9 1139 aa18.41■□□□□ 0.54
CDH1-209ENST00000566510 TMEM132EQ6IEE7 984 aa18.39■□□□□ 0.54
CDH1-209ENST00000566510 ARAP3Q8WWN8 1544 aa18.39■□□□□ 0.53
CDH1-209ENST00000566510 INO80Q9ULG1 1556 aaPredicted RBP18.39■□□□□ 0.53
CDH1-209ENST00000566510 NOS1P29475 1434 aa18.38■□□□□ 0.53
CDH1-209ENST00000566510 NSD3Q9BZ95 1437 aa18.38■□□□□ 0.53
CDH1-209ENST00000566510 IL27Q8NEV9 243 aa18.38■□□□□ 0.53
CDH1-209ENST00000566510 CGNL1Q0VF96 1302 aa18.38■□□□□ 0.53
CDH1-209ENST00000566510 VWDEQ8N2E2 1590 aa18.38■□□□□ 0.53
CDH1-209ENST00000566510 MYOM2P54296 1465 aa18.38■□□□□ 0.53
CDH1-209ENST00000566510 GGT6Q6P531 493 aa18.37■□□□□ 0.53
CDH1-209ENST00000566510 NGEFQ8N5V2 710 aa18.37■□□□□ 0.53
CDH1-209ENST00000566510 CLUAP1Q96AJ1 413 aa18.36■□□□□ 0.53
CDH1-209ENST00000566510 RTN4Q9NQC3 1192 aaKnown RBP18.36■□□□□ 0.53
CDH1-209ENST00000566510 PDE3AQ14432 1141 aa18.36■□□□□ 0.53
CDH1-209ENST00000566510 TCP11L2Q8N4U5 519 aa18.36■□□□□ 0.53
CDH1-209ENST00000566510 BCL2L13Q9BXK5 485 aa18.36■□□□□ 0.53
CDH1-209ENST00000566510 POLR3AO14802 1390 aaPredicted RBP18.35■□□□□ 0.53
CDH1-209ENST00000566510 NUTM2DQ5VT03 806 aaPredicted RBP18.35■□□□□ 0.53
CDH1-209ENST00000566510 SENP3Q9H4L4 574 aaPredicted RBP18.35■□□□□ 0.53
CDH1-209ENST00000566510 MROH2AA6NES4 1674 aa18.35■□□□□ 0.53
CDH1-209ENST00000566510 RUNDC1Q96C34 613 aa18.35■□□□□ 0.53
CDH1-209ENST00000566510 ABCA9Q8IUA7 1624 aa18.34■□□□□ 0.53
CDH1-209ENST00000566510 MTHFSP49914 203 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms