RNA–Protein interactions for RNA: ENST00000566219.1

EDC3-210, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 3

Gene EDC3, Length 688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-210ENST00000566219 LOC105371045A0A1W2PR82 267 aa24.73■■□□□ 1.55
EDC3-210ENST00000566219 CHIC2Q9UKJ5 165 aa24.72■■□□□ 1.55
EDC3-210ENST00000566219 GCC2Q8IWJ2 1684 aa24.72■■□□□ 1.55
EDC3-210ENST00000566219 BCANQ96GW7 911 aa24.71■■□□□ 1.55
EDC3-210ENST00000566219 COL16A1Q07092 1604 aaPredicted RBP24.7■■□□□ 1.54
EDC3-210ENST00000566219 CHD2O14647 1828 aaKnown RBP24.7■■□□□ 1.54
EDC3-210ENST00000566219 JCADQ9P266 1359 aa24.68■■□□□ 1.54
EDC3-210ENST00000566219 ZFYVE9O95405 1425 aa24.67■■□□□ 1.54
EDC3-210ENST00000566219 SLAIN2Q9P270 581 aa24.65■■□□□ 1.54
EDC3-210ENST00000566219 PLEKHG1Q9ULL1 1385 aa24.65■■□□□ 1.54
EDC3-210ENST00000566219 SLC52A1Q9NWF4 448 aa24.64■■□□□ 1.54
EDC3-210ENST00000566219 ADGRL2O95490 1459 aa24.64■■□□□ 1.53
EDC3-210ENST00000566219 RPRD2Q5VT52 1461 aaKnown RBP24.64■■□□□ 1.53
EDC3-210ENST00000566219 RIMS2Q9UQ26 1411 aa24.63■■□□□ 1.53
EDC3-210ENST00000566219 LRP6O75581 1613 aa24.63■■□□□ 1.53
EDC3-210ENST00000566219 TMEM131LA2VDJ0 1609 aa24.62■■□□□ 1.53
EDC3-210ENST00000566219 PPP1R15AO75807 674 aaPredicted RBP24.62■■□□□ 1.53
EDC3-210ENST00000566219 APLP2Q06481 763 aa24.61■■□□□ 1.53
EDC3-210ENST00000566219 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.58■■□□□ 1.52
EDC3-210ENST00000566219 SHPRHQ149N8 1683 aa24.57■■□□□ 1.52
EDC3-210ENST00000566219 AHDC1Q5TGY3 1603 aaPredicted RBP24.57■■□□□ 1.52
EDC3-210ENST00000566219 ANKRD50Q9ULJ7 1429 aa24.56■■□□□ 1.52
EDC3-210ENST00000566219 C14orf37Q86TY3 774 aa24.55■■□□□ 1.52
EDC3-210ENST00000566219 DIP2AQ14689 1571 aa24.54■■□□□ 1.52
EDC3-210ENST00000566219 MEX3CQ5U5Q3 659 aaKnown RBP24.54■■□□□ 1.52
EDC3-210ENST00000566219 UNC13BO14795 1591 aa24.53■■□□□ 1.52
EDC3-210ENST00000566219 SPATA31A6Q5VVP1 1343 aa24.53■■□□□ 1.52
EDC3-210ENST00000566219 ADAMTS13Q76LX8 1427 aa24.52■■□□□ 1.52
EDC3-210ENST00000566219 NCOA3Q9Y6Q9 1424 aa24.52■■□□□ 1.52
EDC3-210ENST00000566219 E9PCH4 1651 aa24.51■■□□□ 1.51
EDC3-210ENST00000566219 CHGAP10645 457 aaKnown RBP24.5■■□□□ 1.51
EDC3-210ENST00000566219 TRIM52Q96A61 297 aa24.5■■□□□ 1.51
EDC3-210ENST00000566219 TBX22Q9Y458 520 aa24.5■■□□□ 1.51
EDC3-210ENST00000566219 HDGFP51858 240 aaKnown RBP24.49■■□□□ 1.51
EDC3-210ENST00000566219 FAM50AQ14320 339 aaKnown RBP24.49■■□□□ 1.51
EDC3-210ENST00000566219 NUTM2DQ5VT03 806 aaPredicted RBP24.49■■□□□ 1.51
EDC3-210ENST00000566219 TRPM2O94759 1503 aa24.47■■□□□ 1.51
EDC3-210ENST00000566219 ZNF772Q68DY9 489 aaPredicted RBP24.47■■□□□ 1.51
EDC3-210ENST00000566219 CADPS2Q86UW7 1296 aa24.47■■□□□ 1.51
EDC3-210ENST00000566219 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.46■■□□□ 1.51
EDC3-210ENST00000566219 UPF1Q92900 1129 aaKnown RBP eCLIP24.46■■□□□ 1.51
EDC3-210ENST00000566219 ATF3P18847 181 aa24.45■■□□□ 1.5
EDC3-210ENST00000566219 PIK3R4Q99570 1358 aa24.44■■□□□ 1.5
EDC3-210ENST00000566219 C19orf44Q9H6X5 657 aa24.43■■□□□ 1.5
EDC3-210ENST00000566219 IQGAP3Q86VI3 1631 aa24.43■■□□□ 1.5
EDC3-210ENST00000566219 PTPRUQ92729 1446 aa24.42■■□□□ 1.5
EDC3-210ENST00000566219 ASXL1Q8IXJ9 1541 aa24.4■■□□□ 1.5
EDC3-210ENST00000566219 NUTM2BA6NNL0 878 aaPredicted RBP24.4■■□□□ 1.5
EDC3-210ENST00000566219 NUTM2EB1AL46 878 aaPredicted RBP24.4■■□□□ 1.5
EDC3-210ENST00000566219 BRINP3Q76B58 766 aa24.4■■□□□ 1.5
EDC3-210ENST00000566219 NUTM2AQ8IVF1 878 aaPredicted RBP24.4■■□□□ 1.5
EDC3-210ENST00000566219 XRN1Q8IZH2 1706 aaKnown RBP24.4■■□□□ 1.5
EDC3-210ENST00000566219 NHSL1Q5SYE7 1610 aa24.39■■□□□ 1.49
EDC3-210ENST00000566219 NRXN3Q9Y4C0 1643 aa24.38■■□□□ 1.49
EDC3-210ENST00000566219 DCCP43146 1447 aa24.37■■□□□ 1.49
EDC3-210ENST00000566219 RXRBP28702 533 aa24.37■■□□□ 1.49
EDC3-210ENST00000566219 CDK12Q9NYV4 1490 aaPredicted RBP24.37■■□□□ 1.49
EDC3-210ENST00000566219 AMOTL2Q9Y2J4 779 aa24.36■■□□□ 1.49
EDC3-210ENST00000566219 AFF2P51816 1311 aa24.34■■□□□ 1.49
EDC3-210ENST00000566219 MST1RQ04912 1400 aa24.33■■□□□ 1.49
EDC3-210ENST00000566219 SETBP1Q9Y6X0 1596 aa24.33■■□□□ 1.48
EDC3-210ENST00000566219 SETD5Q9C0A6 1442 aa24.32■■□□□ 1.48
EDC3-210ENST00000566219 SPHKAPQ2M3C7 1700 aa24.3■■□□□ 1.48
EDC3-210ENST00000566219 RGS12O14924 1447 aa24.29■■□□□ 1.48
EDC3-210ENST00000566219 NALCNQ8IZF0 1738 aa24.29■■□□□ 1.48
EDC3-210ENST00000566219 NUP155O75694 1391 aa24.27■■□□□ 1.48
EDC3-210ENST00000566219 ROCK1Q13464 1354 aa24.27■■□□□ 1.48
EDC3-210ENST00000566219 C8orf37Q96NL8 207 aa24.25■■□□□ 1.47
EDC3-210ENST00000566219 PNPLA6Q8IY17 1366 aa24.25■■□□□ 1.47
EDC3-210ENST00000566219 ADGRL3Q9HAR2 1447 aa24.25■■□□□ 1.47
EDC3-210ENST00000566219 DDX17Q92841 729 aaKnown RBP24.23■■□□□ 1.47
EDC3-210ENST00000566219 METP08581 1390 aa24.23■■□□□ 1.47
EDC3-210ENST00000566219 LRRC59Q96AG4 307 aaKnown RBP24.21■■□□□ 1.47
EDC3-210ENST00000566219 ZNF326Q5BKZ1 582 aaKnown RBP24.2■■□□□ 1.46
EDC3-210ENST00000566219 NEXMIFQ5QGS0 1516 aa24.19■■□□□ 1.46
EDC3-210ENST00000566219 RBM6P78332 1123 aaKnown RBP24.18■■□□□ 1.46
EDC3-210ENST00000566219 QTRT2Q9H974 415 aaKnown RBP24.18■■□□□ 1.46
EDC3-210ENST00000566219 CLTCL1P53675 1640 aa24.17■■□□□ 1.46
EDC3-210ENST00000566219 ITGAEP38570 1179 aa24.15■■□□□ 1.46
EDC3-210ENST00000566219 C1orf167Q5SNV9 1468 aa24.14■■□□□ 1.46
EDC3-210ENST00000566219 LAMC1P11047 1609 aa24.14■■□□□ 1.46
EDC3-210ENST00000566219 ADAMTS2O95450 1211 aa24.14■■□□□ 1.45
EDC3-210ENST00000566219 SRCAPQ6ZRS2 3230 aa24.11■■□□□ 1.45
EDC3-210ENST00000566219 NGLY1Q96IV0 654 aa24.11■■□□□ 1.45
EDC3-210ENST00000566219 KIF1BO60333 1816 aa24.11■■□□□ 1.45
EDC3-210ENST00000566219 PTCH1Q13635 1447 aa24.09■■□□□ 1.45
EDC3-210ENST00000566219 ATAD2Q6PL18 1390 aa24.08■■□□□ 1.45
EDC3-210ENST00000566219 COL22A1Q8NFW1 1626 aaPredicted RBP24.05■■□□□ 1.44
EDC3-210ENST00000566219 ROBO2Q9HCK4 1378 aa24.04■■□□□ 1.44
EDC3-210ENST00000566219 ORAI2Q96SN7 254 aa24.04■■□□□ 1.44
EDC3-210ENST00000566219 USP21Q9UK80 565 aa24.04■■□□□ 1.44
EDC3-210ENST00000566219 SOS2Q07890 1332 aaPredicted RBP24.04■■□□□ 1.44
EDC3-210ENST00000566219 ATRNO75882 1429 aa24.01■■□□□ 1.43
EDC3-210ENST00000566219 EP400Q96L91 3159 aa24.01■■□□□ 1.43
EDC3-210ENST00000566219 TRPC5Q9UL62 973 aaPredicted RBP24.01■■□□□ 1.43
EDC3-210ENST00000566219 MARF1Q9Y4F3 1742 aaKnown RBP23.99■■□□□ 1.43
EDC3-210ENST00000566219 PRAG1Q86YV5 1406 aa23.98■■□□□ 1.43
EDC3-210ENST00000566219 MYOM2P54296 1465 aa23.98■■□□□ 1.43
EDC3-210ENST00000566219 CDC42BPGQ6DT37 1551 aa23.96■■□□□ 1.43
EDC3-210ENST00000566219 FNBP4Q8N3X1 1017 aaPredicted RBP23.96■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms