RNA–Protein interactions for RNA: ENST00000565298.5

IFT140-206, Transcript of intraflagellar transport 140, humanhuman

TSL 2

Gene IFT140, Length 4,727 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-206ENST00000565298 IQGAP2Q13576 1575 aa23.83■■□□□ 1.4
IFT140-206ENST00000565298 GOLGA6L6A8MZA4 724 aa23.82■■□□□ 1.4
IFT140-206ENST00000565298 ESCO1Q5FWF5 840 aa23.82■■□□□ 1.4
IFT140-206ENST00000565298 RPGRIP1LQ68CZ1 1315 aa23.82■■□□□ 1.4
IFT140-206ENST00000565298 EIF2S2P20042 333 aaKnown RBP23.81■■□□□ 1.4
IFT140-206ENST00000565298 RUNDC1Q96C34 613 aa23.81■■□□□ 1.4
IFT140-206ENST00000565298 NOP58Q9Y2X3 529 aaKnown RBP23.81■■□□□ 1.4
IFT140-206ENST00000565298 CCDC7Q96M83 1385 aa23.81■■□□□ 1.4
IFT140-206ENST00000565298 CD109Q6YHK3 1445 aa23.81■■□□□ 1.4
IFT140-206ENST00000565298 KIAA1107Q9UPP5 1409 aa23.81■■□□□ 1.4
IFT140-206ENST00000565298 KIF7Q2M1P5 1343 aa23.8■■□□□ 1.4
IFT140-206ENST00000565298 PLCB2Q00722 1185 aa23.8■■□□□ 1.4
IFT140-206ENST00000565298 PRAM1Q96QH2 718 aa23.8■■□□□ 1.4
IFT140-206ENST00000565298 ABTB2Q8N961 1025 aa23.8■■□□□ 1.4
IFT140-206ENST00000565298 API5Q9BZZ5 524 aaKnown RBP23.8■■□□□ 1.4
IFT140-206ENST00000565298 GRIN2AQ12879 1464 aa23.79■■□□□ 1.4
IFT140-206ENST00000565298 C9orf78Q9NZ63 289 aaPredicted RBP23.79■■□□□ 1.4
IFT140-206ENST00000565298 GNAI1P63096 354 aa23.78■■□□□ 1.4
IFT140-206ENST00000565298 EPRSP07814 1512 aaKnown RBP23.78■■□□□ 1.4
IFT140-206ENST00000565298 BCL2L13Q9BXK5 485 aa23.78■■□□□ 1.4
IFT140-206ENST00000565298 HTATSF1O43719 755 aaKnown RBP23.76■■□□□ 1.39
IFT140-206ENST00000565298 ANKRD30BQ9BXX2 1392 aa23.76■■□□□ 1.39
IFT140-206ENST00000565298 ZNF692Q9BU19 519 aaPredicted RBP23.76■■□□□ 1.39
IFT140-206ENST00000565298 NUTM2GQ5VZR2 741 aa23.76■■□□□ 1.39
IFT140-206ENST00000565298 ZBED9Q6R2W3 1325 aa23.75■■□□□ 1.39
IFT140-206ENST00000565298 LRRFIP1Q32MZ4 808 aaKnown RBP23.74■■□□□ 1.39
IFT140-206ENST00000565298 DAPK1P53355 1430 aa23.73■■□□□ 1.39
IFT140-206ENST00000565298 TSPYL4Q9UJ04 414 aa23.72■■□□□ 1.39
IFT140-206ENST00000565298 TIAM1Q13009 1591 aa23.72■■□□□ 1.39
IFT140-206ENST00000565298 SLC26A8Q96RN1 970 aa23.72■■□□□ 1.39
IFT140-206ENST00000565298 HMOX1P09601 288 aa23.71■■□□□ 1.39
IFT140-206ENST00000565298 CUL7Q14999 1698 aa23.71■■□□□ 1.39
IFT140-206ENST00000565298 FKBP5Q13451 457 aaPredicted RBP23.71■■□□□ 1.39
IFT140-206ENST00000565298 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.7■■□□□ 1.39
IFT140-206ENST00000565298 TOMM22Q9NS69 142 aa23.7■■□□□ 1.38
IFT140-206ENST00000565298 DDX19BQ9UMR2 479 aa23.7■■□□□ 1.38
IFT140-206ENST00000565298 MFAP1P55081 439 aaKnown RBP23.69■■□□□ 1.38
IFT140-206ENST00000565298 MTHFSP49914 203 aa23.69■■□□□ 1.38
IFT140-206ENST00000565298 ROCK1Q13464 1354 aa23.69■■□□□ 1.38
IFT140-206ENST00000565298 CCDC141Q6ZP82 1450 aa23.68■■□□□ 1.38
IFT140-206ENST00000565298 CCDC34Q96HJ3 373 aa23.68■■□□□ 1.38
IFT140-206ENST00000565298 GAS2L2Q8NHY3 880 aa23.68■■□□□ 1.38
IFT140-206ENST00000565298 WASHC2AQ641Q2 1341 aa23.68■■□□□ 1.38
IFT140-206ENST00000565298 DNTTIP2Q5QJE6 756 aaKnown RBP23.68■■□□□ 1.38
IFT140-206ENST00000565298 KIF3AQ9Y496 699 aa23.68■■□□□ 1.38
IFT140-206ENST00000565298 GBP4Q96PP9 640 aa23.67■■□□□ 1.38
IFT140-206ENST00000565298 CDK13Q14004 1512 aaKnown RBP23.67■■□□□ 1.38
IFT140-206ENST00000565298 NBPF1Q3BBV0 1214 aa23.67■■□□□ 1.38
IFT140-206ENST00000565298 PEG3Q9GZU2 1588 aa23.67■■□□□ 1.38
IFT140-206ENST00000565298 KIF16BQ96L93 1317 aa23.67■■□□□ 1.38
IFT140-206ENST00000565298 SPRYD3Q8NCJ5 442 aa23.67■■□□□ 1.38
IFT140-206ENST00000565298 SUPT6HQ7KZ85 1726 aaKnown RBP23.66■■□□□ 1.38
IFT140-206ENST00000565298 URB2Q14146 1524 aaKnown RBP23.66■■□□□ 1.38
IFT140-206ENST00000565298 HSP90B1P14625 803 aaKnown RBP23.66■■□□□ 1.38
IFT140-206ENST00000565298 PLEKHO1Q53GL0 409 aaPredicted RBP23.66■■□□□ 1.38
IFT140-206ENST00000565298 PLB1Q6P1J6 1458 aa23.65■■□□□ 1.38
IFT140-206ENST00000565298 ARHGEF11O15085 1522 aa23.65■■□□□ 1.38
IFT140-206ENST00000565298 CDK19Q9BWU1 502 aa23.65■■□□□ 1.38
IFT140-206ENST00000565298 CENPQQ7L2Z9 268 aaPredicted RBP23.65■■□□□ 1.38
IFT140-206ENST00000565298 PTMSP20962 102 aa23.64■■□□□ 1.38
IFT140-206ENST00000565298 ANKRD45Q5TZF3 282 aa23.64■■□□□ 1.38
IFT140-206ENST00000565298 CHMP4CQ96CF2 233 aa23.64■■□□□ 1.38
IFT140-206ENST00000565298 DZIP1LQ8IYY4 767 aaKnown RBP23.64■■□□□ 1.37
IFT140-206ENST00000565298 NECTIN2Q92692 538 aa23.64■■□□□ 1.37
IFT140-206ENST00000565298 ERBINQ96RT1 1412 aa23.63■■□□□ 1.37
IFT140-206ENST00000565298 COG6Q9Y2V7 657 aa23.63■■□□□ 1.37
IFT140-206ENST00000565298 CNTLNQ9NXG0 1405 aa23.63■■□□□ 1.37
IFT140-206ENST00000565298 NOL10Q9BSC4 688 aaKnown RBP23.62■■□□□ 1.37
IFT140-206ENST00000565298 RTEL1-TNFRSF6BF6WH68 1400 aa23.62■■□□□ 1.37
IFT140-206ENST00000565298 ADGRL1O94910 1474 aa23.62■■□□□ 1.37
IFT140-206ENST00000565298 RRP1P56182 461 aaKnown RBP23.62■■□□□ 1.37
IFT140-206ENST00000565298 SMG6Q86US8 1419 aaKnown RBP23.61■■□□□ 1.37
IFT140-206ENST00000565298 USP35Q9P2H5 1018 aa23.61■■□□□ 1.37
IFT140-206ENST00000565298 CLSTN1O94985 981 aa23.61■■□□□ 1.37
IFT140-206ENST00000565298 CABP1Q9NZU7 370 aa23.61■■□□□ 1.37
IFT140-206ENST00000565298 SLC12A5Q9H2X9 1139 aa23.61■■□□□ 1.37
IFT140-206ENST00000565298 ST18O60284 1047 aa23.6■■□□□ 1.37
IFT140-206ENST00000565298 HSP90AB4PQ58FF6 505 aa23.6■■□□□ 1.37
IFT140-206ENST00000565298 BRD4O60885 1362 aaPredicted RBP23.6■■□□□ 1.37
IFT140-206ENST00000565298 TATP17735 454 aaPredicted RBP23.59■■□□□ 1.37
IFT140-206ENST00000565298 RILPL2Q969X0 211 aa23.59■■□□□ 1.37
IFT140-206ENST00000565298 ATAD2Q6PL18 1390 aa23.59■■□□□ 1.37
IFT140-206ENST00000565298 G3BP1Q13283 466 aaKnown RBP eCLIP23.59■■□□□ 1.37
IFT140-206ENST00000565298 ZNF608Q9ULD9 1512 aaPredicted RBP23.58■■□□□ 1.37
IFT140-206ENST00000565298 RUFY2Q8WXA3 655 aa23.58■■□□□ 1.37
IFT140-206ENST00000565298 RIC3Q7Z5B4 369 aa23.58■■□□□ 1.36
IFT140-206ENST00000565298 IFIT2P09913 472 aaKnown RBP23.57■■□□□ 1.36
IFT140-206ENST00000565298 VPS37DQ86XT2 251 aa23.57■■□□□ 1.36
IFT140-206ENST00000565298 AMOTL1Q8IY63 956 aa23.57■■□□□ 1.36
IFT140-206ENST00000565298 DIAPH3Q9NSV4 1193 aa23.57■■□□□ 1.36
IFT140-206ENST00000565298 STRN4Q9NRL3 753 aa23.57■■□□□ 1.36
IFT140-206ENST00000565298 PPP6R1Q9UPN7 881 aa23.57■■□□□ 1.36
IFT140-206ENST00000565298 PLIN1O60240 522 aa23.56■■□□□ 1.36
IFT140-206ENST00000565298 PRDM11Q9NQV5 511 aa23.55■■□□□ 1.36
IFT140-206ENST00000565298 PHF23Q9BUL5 403 aaPredicted RBP23.55■■□□□ 1.36
IFT140-206ENST00000565298 CCDC61Q9Y6R9 512 aa23.55■■□□□ 1.36
IFT140-206ENST00000565298 TCP11L2Q8N4U5 519 aa23.54■■□□□ 1.36
IFT140-206ENST00000565298 PRKAR2BP31323 418 aa23.54■■□□□ 1.36
IFT140-206ENST00000565298 SYAP1Q96A49 352 aaPredicted RBP23.54■■□□□ 1.36
IFT140-206ENST00000565298 PPP2R1AP30153 589 aa23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms