RNA–Protein interactions for RNA: ENST00000564068.1

COMMD4-209, Transcript of COMM domain containing 4, humanhuman

Gene COMMD4, Length 4,204 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-209ENST00000564068 RBM10P98175 930 aaKnown RBP15.68■□□□□ 0.1
COMMD4-209ENST00000564068 PLEKHG5O94827 1062 aa15.67■□□□□ 0.1
COMMD4-209ENST00000564068 C14orf37Q86TY3 774 aa15.67■□□□□ 0.1
COMMD4-209ENST00000564068 GOLGA6L4A6NEF3 574 aa15.67■□□□□ 0.1
COMMD4-209ENST00000564068 MIA2Q96PC5 1412 aa15.67■□□□□ 0.1
COMMD4-209ENST00000564068 NASPP49321 788 aaPredicted RBP15.67■□□□□ 0.1
COMMD4-209ENST00000564068 MCCP23508 829 aa15.67■□□□□ 0.1
COMMD4-209ENST00000564068 ESPNB1AK53 854 aa15.66■□□□□ 0.1
COMMD4-209ENST00000564068 ANKRD50Q9ULJ7 1429 aa15.66■□□□□ 0.1
COMMD4-209ENST00000564068 SOX12O15370 315 aa15.66■□□□□ 0.1
COMMD4-209ENST00000564068 EFCAB5A4FU69 1503 aa15.66■□□□□ 0.1
COMMD4-209ENST00000564068 NUTM2DQ5VT03 806 aaPredicted RBP15.65■□□□□ 0.1
COMMD4-209ENST00000564068 ANKRD30BQ9BXX2 1392 aa15.65■□□□□ 0.1
COMMD4-209ENST00000564068 KCNJ4P48050 445 aa15.65■□□□□ 0.1
COMMD4-209ENST00000564068 GRPEL1Q9HAV7 217 aa15.65■□□□□ 0.1
COMMD4-209ENST00000564068 SYAP1Q96A49 352 aaPredicted RBP15.64■□□□□ 0.09
COMMD4-209ENST00000564068 DDX19BQ9UMR2 479 aa15.64■□□□□ 0.09
COMMD4-209ENST00000564068 PDE3AQ14432 1141 aa15.64■□□□□ 0.09
COMMD4-209ENST00000564068 MCTP1Q6DN14 999 aa15.64■□□□□ 0.09
COMMD4-209ENST00000564068 ST18O60284 1047 aa15.64■□□□□ 0.09
COMMD4-209ENST00000564068 ZRSR1Q15695 479 aaKnown RBP15.64■□□□□ 0.09
COMMD4-209ENST00000564068 CFAP44Q96MT7 982 aa15.64■□□□□ 0.09
COMMD4-209ENST00000564068 SYNJ2O15056 1496 aa15.64■□□□□ 0.09
COMMD4-209ENST00000564068 BIVM-ERCC5R4GMW8 1640 aa15.63■□□□□ 0.09
COMMD4-209ENST00000564068 TCP11L2Q8N4U5 519 aa15.63■□□□□ 0.09
COMMD4-209ENST00000564068 EIF3AQ14152 1382 aaKnown RBP15.63■□□□□ 0.09
COMMD4-209ENST00000564068 TAOK2Q9UL54 1235 aa15.63■□□□□ 0.09
COMMD4-209ENST00000564068 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.62■□□□□ 0.09
COMMD4-209ENST00000564068 PCF11O94913 1555 aaKnown RBP15.62■□□□□ 0.09
COMMD4-209ENST00000564068 PTPRKQ15262 1439 aa15.61■□□□□ 0.09
COMMD4-209ENST00000564068 RNF214Q8ND24 703 aa15.61■□□□□ 0.09
COMMD4-209ENST00000564068 RUNDC1Q96C34 613 aa15.61■□□□□ 0.09
COMMD4-209ENST00000564068 WASHC2CQ9Y4E1 1318 aa15.61■□□□□ 0.09
COMMD4-209ENST00000564068 OS9Q13438 667 aaPredicted RBP15.61■□□□□ 0.09
COMMD4-209ENST00000564068 CDK13Q14004 1512 aaKnown RBP15.6■□□□□ 0.09
COMMD4-209ENST00000564068 TRIM6-TRIM34B2RNG4 842 aa15.6■□□□□ 0.09
COMMD4-209ENST00000564068 NGEFQ8N5V2 710 aa15.6■□□□□ 0.09
COMMD4-209ENST00000564068 CAVIN1Q6NZI2 390 aaKnown RBP15.6■□□□□ 0.09
COMMD4-209ENST00000564068 KIAA1107Q9UPP5 1409 aa15.6■□□□□ 0.09
COMMD4-209ENST00000564068 KIF21AQ7Z4S6 1674 aa15.6■□□□□ 0.09
COMMD4-209ENST00000564068 SLFN5Q08AF3 891 aa15.59■□□□□ 0.09
COMMD4-209ENST00000564068 RRP9O43818 475 aaKnown RBP15.59■□□□□ 0.09
COMMD4-209ENST00000564068 KIAA1211Q6ZU35 1233 aa15.59■□□□□ 0.09
COMMD4-209ENST00000564068 SLC4A10Q6U841 1118 aa15.59■□□□□ 0.09
COMMD4-209ENST00000564068 TBC1D2Q9BYX2 928 aa15.58■□□□□ 0.09
COMMD4-209ENST00000564068 MAGI1Q96QZ7 1491 aaPredicted RBP15.58■□□□□ 0.08
COMMD4-209ENST00000564068 MAP3K1Q13233 1512 aa15.57■□□□□ 0.08
COMMD4-209ENST00000564068 FGD1P98174 961 aa15.57■□□□□ 0.08
COMMD4-209ENST00000564068 DUSP27Q5VZP5 1158 aa15.57■□□□□ 0.08
COMMD4-209ENST00000564068 AFAP1Q8N556 730 aa15.57■□□□□ 0.08
COMMD4-209ENST00000564068 GRIN2AQ12879 1464 aa15.57■□□□□ 0.08
COMMD4-209ENST00000564068 PANK2Q9BZ23 570 aa15.56■□□□□ 0.08
COMMD4-209ENST00000564068 IGHDP01880 384 aa15.56■□□□□ 0.08
COMMD4-209ENST00000564068 TPM2P07951 284 aa15.56■□□□□ 0.08
COMMD4-209ENST00000564068 MTHFSP49914 203 aa15.56■□□□□ 0.08
COMMD4-209ENST00000564068 MPNDQ8N594 471 aa15.56■□□□□ 0.08
COMMD4-209ENST00000564068 RIPK4P57078 832 aa15.55■□□□□ 0.08
COMMD4-209ENST00000564068 HDGFL2Q7Z4V5 671 aaPredicted RBP15.55■□□□□ 0.08
COMMD4-209ENST00000564068 TSR2Q969E8 191 aaKnown RBP15.55■□□□□ 0.08
COMMD4-209ENST00000564068 NAP1L2Q9ULW6 460 aaPredicted RBP15.55■□□□□ 0.08
COMMD4-209ENST00000564068 C8orf34Q49A92 452 aa15.55■□□□□ 0.08
COMMD4-209ENST00000564068 ZMYND15Q9H091 742 aa15.54■□□□□ 0.08
COMMD4-209ENST00000564068 EPRSP07814 1512 aaKnown RBP15.54■□□□□ 0.08
COMMD4-209ENST00000564068 EHBP1L1Q8N3D4 1523 aa15.54■□□□□ 0.08
COMMD4-209ENST00000564068 A0A0U1RQG5 324 aaPredicted RBP15.54■□□□□ 0.08
COMMD4-209ENST00000564068 NUCB2P80303 420 aa15.53■□□□□ 0.08
COMMD4-209ENST00000564068 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.53■□□□□ 0.08
COMMD4-209ENST00000564068 XRCC6P12956 609 aaKnown RBP eCLIP15.53■□□□□ 0.08
COMMD4-209ENST00000564068 EXOSC9Q06265 439 aaKnown RBP15.53■□□□□ 0.08
COMMD4-209ENST00000564068 AAMPQ13685 434 aa15.53■□□□□ 0.08
COMMD4-209ENST00000564068 KIAA0586Q9BVV6 1533 aa15.53■□□□□ 0.08
COMMD4-209ENST00000564068 PRPF40AO75400 957 aaKnown RBP15.52■□□□□ 0.08
COMMD4-209ENST00000564068 RILPL2Q969X0 211 aa15.52■□□□□ 0.07
COMMD4-209ENST00000564068 TROQ12816 1431 aaPredicted RBP15.51■□□□□ 0.07
COMMD4-209ENST00000564068 PHF14O94880 888 aa15.51■□□□□ 0.07
COMMD4-209ENST00000564068 RAPGEF3O95398 923 aa15.51■□□□□ 0.07
COMMD4-209ENST00000564068 CCDC173Q0VFZ6 552 aa15.51■□□□□ 0.07
COMMD4-209ENST00000564068 CSPP1Q1MSJ5 1256 aa15.51■□□□□ 0.07
COMMD4-209ENST00000564068 HAP1P54257 671 aaPredicted RBP15.51■□□□□ 0.07
COMMD4-209ENST00000564068 C1orf115Q9H7X2 142 aa15.51■□□□□ 0.07
COMMD4-209ENST00000564068 DAPK1P53355 1430 aa15.5■□□□□ 0.07
COMMD4-209ENST00000564068 HMMRO75330 724 aa15.5■□□□□ 0.07
COMMD4-209ENST00000564068 CFAP70Q5T0N1 1121 aa15.5■□□□□ 0.07
COMMD4-209ENST00000564068 RPRD2Q5VT52 1461 aaKnown RBP15.5■□□□□ 0.07
COMMD4-209ENST00000564068 WWC1Q8IX03 1113 aa15.5■□□□□ 0.07
COMMD4-209ENST00000564068 TERF2IPQ9NYB0 399 aa15.49■□□□□ 0.07
COMMD4-209ENST00000564068 PTPN23Q9H3S7 1636 aa15.49■□□□□ 0.07
COMMD4-209ENST00000564068 GOLGA6L6A8MZA4 724 aa15.48■□□□□ 0.07
COMMD4-209ENST00000564068 BCL11BQ9C0K0 894 aaPredicted RBP15.48■□□□□ 0.07
COMMD4-209ENST00000564068 CHMP3Q9Y3E7 222 aa15.48■□□□□ 0.07
COMMD4-209ENST00000564068 PLB1Q6P1J6 1458 aa15.48■□□□□ 0.07
COMMD4-209ENST00000564068 SEC24BO95487 1268 aa15.48■□□□□ 0.07
COMMD4-209ENST00000564068 ISY1Q9ULR0 285 aaKnown RBP15.48■□□□□ 0.07
COMMD4-209ENST00000564068 NRDCO43847 1150 aa15.48■□□□□ 0.07
COMMD4-209ENST00000564068 MVPQ14764 893 aaKnown RBP15.48■□□□□ 0.07
COMMD4-209ENST00000564068 RTF1Q92541 710 aaKnown RBP15.48■□□□□ 0.07
COMMD4-209ENST00000564068 REC8O95072 547 aa15.47■□□□□ 0.07
COMMD4-209ENST00000564068 RNF123Q5XPI4 1314 aa15.47■□□□□ 0.07
COMMD4-209ENST00000564068 IQGAP2Q13576 1575 aa15.47■□□□□ 0.07
COMMD4-209ENST00000564068 RRAGDQ9NQL2 400 aaPredicted RBP15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms