RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 HSPA5P11021 654 aaKnown RBP30.99■■■□□ 2.55
LINC01960-201ENST00000563759 CARD11Q9BXL7 1154 aa30.99■■■□□ 2.55
LINC01960-201ENST00000563759 STAG3Q9UJ98 1225 aa30.99■■■□□ 2.55
LINC01960-201ENST00000563759 NRXN1Q9ULB1 1477 aa30.97■■■□□ 2.55
LINC01960-201ENST00000563759 KDM5AP29375 1690 aaKnown RBP30.97■■■□□ 2.55
LINC01960-201ENST00000563759 USP47Q96K76 1375 aa30.97■■■□□ 2.55
LINC01960-201ENST00000563759 CEBPAP49715 358 aaPredicted RBP30.95■■■□□ 2.55
LINC01960-201ENST00000563759 ADGRF5Q8IZF2 1346 aa30.94■■■□□ 2.54
LINC01960-201ENST00000563759 GPRASP1Q5JY77 1395 aa30.93■■■□□ 2.54
LINC01960-201ENST00000563759 UBR1Q8IWV7 1749 aa30.93■■■□□ 2.54
LINC01960-201ENST00000563759 A2ML1A8K2U0 1454 aa30.93■■■□□ 2.54
LINC01960-201ENST00000563759 PLPPR3Q6T4P5 718 aa30.92■■■□□ 2.54
LINC01960-201ENST00000563759 NLRP1Q9C000 1473 aa30.91■■■□□ 2.54
LINC01960-201ENST00000563759 NBPF1Q3BBV0 1214 aa30.91■■■□□ 2.54
LINC01960-201ENST00000563759 POLR1AO95602 1720 aaPredicted RBP30.9■■■□□ 2.54
LINC01960-201ENST00000563759 PIK3C2GO75747 1445 aa30.9■■■□□ 2.54
LINC01960-201ENST00000563759 DIEXFQ68CQ4 756 aaKnown RBP30.89■■■□□ 2.53
LINC01960-201ENST00000563759 MYO3AQ8NEV4 1616 aa30.88■■■□□ 2.53
LINC01960-201ENST00000563759 IQGAP1P46940 1657 aa30.88■■■□□ 2.53
LINC01960-201ENST00000563759 VGFO15240 615 aaPredicted RBP30.87■■■□□ 2.53
LINC01960-201ENST00000563759 ZFYVE9O95405 1425 aa30.85■■■□□ 2.53
LINC01960-201ENST00000563759 NUTM2DQ5VT03 806 aaPredicted RBP30.85■■■□□ 2.53
LINC01960-201ENST00000563759 SETBP1Q9Y6X0 1596 aa30.82■■■□□ 2.52
LINC01960-201ENST00000563759 RIMS2Q9UQ26 1411 aa30.8■■■□□ 2.52
LINC01960-201ENST00000563759 CFAP70Q5T0N1 1121 aa30.8■■■□□ 2.52
LINC01960-201ENST00000563759 SCAF11Q99590 1463 aaKnown RBP30.77■■■□□ 2.52
LINC01960-201ENST00000563759 SETD1BQ9UPS6 1966 aaKnown RBP30.75■■■□□ 2.51
LINC01960-201ENST00000563759 ST20-MTHFSA0A0A6YYL1 179 aa30.74■■■□□ 2.51
LINC01960-201ENST00000563759 CEP170BQ9Y4F5 1589 aaPredicted RBP30.73■■■□□ 2.51
LINC01960-201ENST00000563759 C14orf93Q9H972 538 aaKnown RBP30.73■■■□□ 2.51
LINC01960-201ENST00000563759 ADGRB1O14514 1584 aa30.72■■■□□ 2.51
LINC01960-201ENST00000563759 ZNF142P52746 1687 aaPredicted RBP30.72■■■□□ 2.51
LINC01960-201ENST00000563759 TMEM2Q9UHN6 1383 aa30.71■■■□□ 2.51
LINC01960-201ENST00000563759 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.7■■■□□ 2.51
LINC01960-201ENST00000563759 EIF3AQ14152 1382 aaKnown RBP30.7■■■□□ 2.51
LINC01960-201ENST00000563759 PTPRMP28827 1452 aa30.7■■■□□ 2.51
LINC01960-201ENST00000563759 WASHC2AQ641Q2 1341 aa30.7■■■□□ 2.5
LINC01960-201ENST00000563759 HDGFP51858 240 aaKnown RBP30.67■■■□□ 2.5
LINC01960-201ENST00000563759 SENP3Q9H4L4 574 aaPredicted RBP30.67■■■□□ 2.5
LINC01960-201ENST00000563759 ALKQ9UM73 1620 aa30.67■■■□□ 2.5
LINC01960-201ENST00000563759 CCDC7Q96M83 1385 aa30.66■■■□□ 2.5
LINC01960-201ENST00000563759 DDX10Q13206 875 aaKnown RBP30.65■■■□□ 2.5
LINC01960-201ENST00000563759 SETD1AO15047 1707 aaKnown RBP30.65■■■□□ 2.5
LINC01960-201ENST00000563759 NRXN3Q9Y4C0 1643 aa30.65■■■□□ 2.5
LINC01960-201ENST00000563759 SLIT1O75093 1534 aa30.64■■■□□ 2.5
LINC01960-201ENST00000563759 C11orf95C9JLR9 678 aaPredicted RBP30.64■■■□□ 2.5
LINC01960-201ENST00000563759 ASXL1Q8IXJ9 1541 aa30.64■■■□□ 2.5
LINC01960-201ENST00000563759 KIF7Q2M1P5 1343 aa30.62■■■□□ 2.49
LINC01960-201ENST00000563759 ARHGEF28Q8N1W1 1705 aaKnown RBP30.62■■■□□ 2.49
LINC01960-201ENST00000563759 TMEM132EQ6IEE7 984 aa30.61■■■□□ 2.49
LINC01960-201ENST00000563759 ARHGAP23Q9P227 1491 aa30.61■■■□□ 2.49
LINC01960-201ENST00000563759 THEMISQ8N1K5 641 aaPredicted RBP30.6■■■□□ 2.49
LINC01960-201ENST00000563759 QRICH2Q9H0J4 1663 aa30.58■■■□□ 2.49
LINC01960-201ENST00000563759 EID1Q9Y6B2 187 aa30.56■■■□□ 2.48
LINC01960-201ENST00000563759 TESK2Q96S53 571 aa30.55■■■□□ 2.48
LINC01960-201ENST00000563759 TRAK1Q9UPV9 953 aa30.55■■■□□ 2.48
LINC01960-201ENST00000563759 POLR3GLQ9BT43 218 aa30.54■■■□□ 2.48
LINC01960-201ENST00000563759 TXNDC2Q86VQ3 553 aa30.53■■■□□ 2.48
LINC01960-201ENST00000563759 BCANQ96GW7 911 aa30.53■■■□□ 2.48
LINC01960-201ENST00000563759 PLEKHG1Q9ULL1 1385 aa30.52■■■□□ 2.48
LINC01960-201ENST00000563759 LTKP29376 864 aa30.51■■■□□ 2.47
LINC01960-201ENST00000563759 YTHDC2Q9H6S0 1430 aaKnown RBP30.51■■■□□ 2.47
LINC01960-201ENST00000563759 TMF1P82094 1093 aa30.5■■■□□ 2.47
LINC01960-201ENST00000563759 DISP3Q9P2K9 1392 aa30.5■■■□□ 2.47
LINC01960-201ENST00000563759 CENPJQ9HC77 1338 aaPredicted RBP30.49■■■□□ 2.47
LINC01960-201ENST00000563759 STK26Q9P289 416 aa30.46■■■□□ 2.47
LINC01960-201ENST00000563759 SBNO2Q9Y2G9 1366 aa30.45■■■□□ 2.46
LINC01960-201ENST00000563759 KNDC1Q76NI1 1749 aa30.44■■■□□ 2.46
LINC01960-201ENST00000563759 ADAMTS13Q76LX8 1427 aa30.44■■■□□ 2.46
LINC01960-201ENST00000563759 SLC24A1O60721 1099 aa30.42■■■□□ 2.46
LINC01960-201ENST00000563759 DIP2AQ14689 1571 aa30.42■■■□□ 2.46
LINC01960-201ENST00000563759 MIER1Q8N108 512 aa30.42■■■□□ 2.46
LINC01960-201ENST00000563759 METP08581 1390 aa30.41■■■□□ 2.46
LINC01960-201ENST00000563759 DLC1Q96QB1 1528 aa30.4■■■□□ 2.46
LINC01960-201ENST00000563759 LRPPRCP42704 1394 aaKnown RBP30.4■■■□□ 2.46
LINC01960-201ENST00000563759 CDCA8Q53HL2 280 aa30.38■■■□□ 2.45
LINC01960-201ENST00000563759 KDM4FA0A1W2PPD8 638 aa30.38■■■□□ 2.45
LINC01960-201ENST00000563759 MED14O60244 1454 aa30.37■■■□□ 2.45
LINC01960-201ENST00000563759 ANKLE2Q86XL3 938 aa30.36■■■□□ 2.45
LINC01960-201ENST00000563759 MYOM1P52179 1685 aa30.34■■■□□ 2.45
LINC01960-201ENST00000563759 CPS1P31327 1500 aa30.34■■■□□ 2.45
LINC01960-201ENST00000563759 ABCC11Q96J66 1382 aa30.34■■■□□ 2.45
LINC01960-201ENST00000563759 SLC26A8Q96RN1 970 aa30.33■■■□□ 2.45
LINC01960-201ENST00000563759 PRAM1Q96QH2 718 aa30.32■■■□□ 2.44
LINC01960-201ENST00000563759 POGKQ9P215 609 aa30.32■■■□□ 2.44
LINC01960-201ENST00000563759 SAFB2Q14151 953 aaKnown RBP eCLIP30.31■■■□□ 2.44
LINC01960-201ENST00000563759 TECPR2O15040 1411 aa30.31■■■□□ 2.44
LINC01960-201ENST00000563759 ANP32CO43423 234 aa30.29■■■□□ 2.44
LINC01960-201ENST00000563759 TULP4Q9NRJ4 1543 aa30.29■■■□□ 2.44
LINC01960-201ENST00000563759 TBX22Q9Y458 520 aa30.27■■■□□ 2.44
LINC01960-201ENST00000563759 EVC2Q86UK5 1308 aa30.25■■■□□ 2.43
LINC01960-201ENST00000563759 FAM135BQ49AJ0 1406 aa30.24■■■□□ 2.43
LINC01960-201ENST00000563759 XRN1Q8IZH2 1706 aaKnown RBP30.23■■■□□ 2.43
LINC01960-201ENST00000563759 MINK1Q8N4C8 1332 aaPredicted RBP30.22■■■□□ 2.43
LINC01960-201ENST00000563759 NPHP4O75161 1426 aaPredicted RBP30.22■■■□□ 2.43
LINC01960-201ENST00000563759 PTPRUQ92729 1446 aa30.22■■■□□ 2.43
LINC01960-201ENST00000563759 PLEKHH1Q9ULM0 1364 aa30.22■■■□□ 2.43
LINC01960-201ENST00000563759 WAPLQ7Z5K2 1190 aa30.21■■■□□ 2.43
LINC01960-201ENST00000563759 CHD2O14647 1828 aaKnown RBP30.2■■■□□ 2.43
LINC01960-201ENST00000563759 PIK3R4Q99570 1358 aa30.18■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms