RNA–Protein interactions for RNA: ENST00000563724.1

LINC02516-201, Transcript of long intergenic non-protein coding RNA 2516, humanhuman

TSL 2 BASIC

Gene LINC02516, Length 1,771 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02516-201ENST00000563724 TRIM6-TRIM34B2RNG4 842 aa7.17□□□□□ -1.26
LINC02516-201ENST00000563724 FNBP4Q8N3X1 1017 aaPredicted RBP7.17□□□□□ -1.26
LINC02516-201ENST00000563724 SH3D19Q5HYK7 790 aa7.16□□□□□ -1.26
LINC02516-201ENST00000563724 PCDH10Q9P2E7 1040 aa7.16□□□□□ -1.26
LINC02516-201ENST00000563724 TSKSQ9UJT2 592 aa7.16□□□□□ -1.26
LINC02516-201ENST00000563724 TMCO4Q5TGY1 634 aa7.15□□□□□ -1.26
LINC02516-201ENST00000563724 CDAN1Q8IWY9 1227 aa7.15□□□□□ -1.26
LINC02516-201ENST00000563724 TTC13Q8NBP0 860 aa7.15□□□□□ -1.27
LINC02516-201ENST00000563724 SLC4A5Q9BY07 1137 aa7.15□□□□□ -1.27
LINC02516-201ENST00000563724 VPS9D1Q9Y2B5 631 aa7.15□□□□□ -1.27
LINC02516-201ENST00000563724 ANKRD13DQ6ZTN6 518 aa7.14□□□□□ -1.27
LINC02516-201ENST00000563724 PACS2Q86VP3 889 aa7.14□□□□□ -1.27
LINC02516-201ENST00000563724 RGS22Q8NE09 1264 aa7.14□□□□□ -1.27
LINC02516-201ENST00000563724 POM121Q96HA1 1249 aa7.14□□□□□ -1.27
LINC02516-201ENST00000563724 KRTAP3-3Q9BYR6 98 aa7.14□□□□□ -1.27
LINC02516-201ENST00000563724 KRTAP3-2Q9BYR7 98 aa7.14□□□□□ -1.27
LINC02516-201ENST00000563724 FAM198AQ9UFP1 575 aa7.14□□□□□ -1.27
LINC02516-201ENST00000563724 ATP1B4Q9UN42 357 aaPredicted RBP7.14□□□□□ -1.27
LINC02516-201ENST00000563724 NBPF26B4DH59 902 aa7.13□□□□□ -1.27
LINC02516-201ENST00000563724 FAM161AQ3B820 660 aa7.13□□□□□ -1.27
LINC02516-201ENST00000563724 ADGRD1Q6QNK2 874 aa7.13□□□□□ -1.27
LINC02516-201ENST00000563724 KIAA1468Q9P260 1216 aa7.13□□□□□ -1.27
LINC02516-201ENST00000563724 RABGEF1Q9UJ41 708 aa7.13□□□□□ -1.27
LINC02516-201ENST00000563724 TK2O00142 265 aa7.13□□□□□ -1.27
LINC02516-201ENST00000563724 SKIV2LQ15477 1246 aaKnown RBP7.13□□□□□ -1.27
LINC02516-201ENST00000563724 RETREG2Q8NC44 543 aa7.13□□□□□ -1.27
LINC02516-201ENST00000563724 ADGRG1Q9Y653 693 aa7.13□□□□□ -1.27
LINC02516-201ENST00000563724 GZF1Q9H116 711 aaPredicted RBP7.12□□□□□ -1.27
LINC02516-201ENST00000563724 MTMR7Q9Y216 660 aa7.12□□□□□ -1.27
LINC02516-201ENST00000563724 NUDT18Q6ZVK8 323 aa7.11□□□□□ -1.27
LINC02516-201ENST00000563724 REPIN1Q9BWE0 567 aaKnown RBP7.11□□□□□ -1.27
LINC02516-201ENST00000563724 NBPF3Q9H094 633 aa7.11□□□□□ -1.27
LINC02516-201ENST00000563724 PNMA3Q9UL41 463 aa7.11□□□□□ -1.27
LINC02516-201ENST00000563724 OATP04181 439 aa7.1□□□□□ -1.27
LINC02516-201ENST00000563724 METTL3Q86U44 580 aaKnown RBP7.1□□□□□ -1.27
LINC02516-201ENST00000563724 RBM46Q8TBY0 533 aaKnown RBP7.1□□□□□ -1.27
LINC02516-201ENST00000563724 TATDN2Q93075 761 aa7.1□□□□□ -1.27
LINC02516-201ENST00000563724 SMAPO00193 183 aa7.1□□□□□ -1.27
LINC02516-201ENST00000563724 MFAP1P55081 439 aaKnown RBP7.1□□□□□ -1.27
LINC02516-201ENST00000563724 SEPT9Q9UHD8 586 aaPredicted RBP7.1□□□□□ -1.27
LINC02516-201ENST00000563724 C3orf80F5H4A9 247 aa7.09□□□□□ -1.27
LINC02516-201ENST00000563724 CLCN1P35523 988 aa7.09□□□□□ -1.27
LINC02516-201ENST00000563724 ZNF330Q9Y3S2 320 aaPredicted RBP7.09□□□□□ -1.27
LINC02516-201ENST00000563724 SPDYE5A6NIY4 337 aa7.08□□□□□ -1.28
LINC02516-201ENST00000563724 PXYLP1Q8TE99 480 aa7.08□□□□□ -1.28
LINC02516-201ENST00000563724 COG6Q9Y2V7 657 aa7.08□□□□□ -1.28
LINC02516-201ENST00000563724 BHMG1C9JSJ3 638 aaPredicted RBP7.08□□□□□ -1.28
LINC02516-201ENST00000563724 HRO43593 1189 aa7.08□□□□□ -1.28
LINC02516-201ENST00000563724 IRF5Q13568 498 aa7.08□□□□□ -1.28
LINC02516-201ENST00000563724 MRPL50Q8N5N7 158 aaKnown RBP7.08□□□□□ -1.28
LINC02516-201ENST00000563724 PHOX2BQ99453 314 aa7.08□□□□□ -1.28
LINC02516-201ENST00000563724 EYA1Q99502 592 aa7.08□□□□□ -1.28
LINC02516-201ENST00000563724 PDE4CQ08493 712 aa7.07□□□□□ -1.28
LINC02516-201ENST00000563724 FAM98CQ17RN3 349 aaKnown RBP7.07□□□□□ -1.28
LINC02516-201ENST00000563724 PROCA1Q8NCQ7 364 aaPredicted RBP7.07□□□□□ -1.28
LINC02516-201ENST00000563724 STAC3Q96MF2 364 aa7.07□□□□□ -1.28
LINC02516-201ENST00000563724 GPCPD1Q9NPB8 672 aa7.07□□□□□ -1.28
LINC02516-201ENST00000563724 ACIN1Q9UKV3 1341 aaKnown RBP7.06□□□□□ -1.28
LINC02516-201ENST00000563724 PPP1R15AO75807 674 aaPredicted RBP7.06□□□□□ -1.28
LINC02516-201ENST00000563724 RBM25P49756 843 aaKnown RBP7.06□□□□□ -1.28
LINC02516-201ENST00000563724 RCCD1A6NED2 376 aa7.05□□□□□ -1.28
LINC02516-201ENST00000563724 SSTR3P32745 418 aaPredicted RBP7.05□□□□□ -1.28
LINC02516-201ENST00000563724 FOXD4L5Q5VV16 416 aaPredicted RBP7.05□□□□□ -1.28
LINC02516-201ENST00000563724 LAPTM4BQ86VI4 370 aa7.05□□□□□ -1.28
LINC02516-201ENST00000563724 NLRP7Q8WX94 980 aa7.05□□□□□ -1.28
LINC02516-201ENST00000563724 FOXD4L4Q8WXT5 416 aaPredicted RBP7.05□□□□□ -1.28
LINC02516-201ENST00000563724 TMUB1Q9BVT8 246 aa7.05□□□□□ -1.28
LINC02516-201ENST00000563724 POLR3EQ9NVU0 708 aa7.05□□□□□ -1.28
LINC02516-201ENST00000563724 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.05□□□□□ -1.28
LINC02516-201ENST00000563724 DNAJB2P25686 324 aa7.05□□□□□ -1.28
LINC02516-201ENST00000563724 MDM2Q00987 491 aaPredicted RBP7.05□□□□□ -1.28
LINC02516-201ENST00000563724 BEGAINQ9BUH8 593 aa7.05□□□□□ -1.28
LINC02516-201ENST00000563724 LOC105371045A0A1W2PR82 267 aa7.04□□□□□ -1.28
LINC02516-201ENST00000563724 PATL2C9JE40 543 aaKnown RBP7.03□□□□□ -1.28
LINC02516-201ENST00000563724 BANK1Q8NDB2 785 aa7.03□□□□□ -1.28
LINC02516-201ENST00000563724 ZFRQ96KR1 1074 aaKnown RBP7.03□□□□□ -1.28
LINC02516-201ENST00000563724 TMEM134Q9H6X4 195 aa7.03□□□□□ -1.28
LINC02516-201ENST00000563724 GOLGA8CPA6NN73 597 aa7.03□□□□□ -1.28
LINC02516-201ENST00000563724 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.03□□□□□ -1.28
LINC02516-201ENST00000563724 SHROOM4Q9ULL8 1493 aa7.02□□□□□ -1.29
LINC02516-201ENST00000563724 ZNF428Q96B54 188 aa7.02□□□□□ -1.29
LINC02516-201ENST00000563724 HDGFP51858 240 aaKnown RBP7.01□□□□□ -1.29
LINC02516-201ENST00000563724 WWC1Q8IX03 1113 aa7.01□□□□□ -1.29
LINC02516-201ENST00000563724 CALR3Q96L12 384 aaKnown RBP7.01□□□□□ -1.29
LINC02516-201ENST00000563724 SNRKQ9NRH2 765 aa7.01□□□□□ -1.29
LINC02516-201ENST00000563724 RNF40O75150 1001 aa7□□□□□ -1.29
LINC02516-201ENST00000563724 SAMD7Q7Z3H4 446 aa7□□□□□ -1.29
LINC02516-201ENST00000563724 E9PSI1 815 aa7□□□□□ -1.29
LINC02516-201ENST00000563724 IGSF3O75054 1194 aa7□□□□□ -1.29
LINC02516-201ENST00000563724 SLC4A3P48751 1232 aa7□□□□□ -1.29
LINC02516-201ENST00000563724 SWT1Q5T5J6 900 aaKnown RBP7□□□□□ -1.29
LINC02516-201ENST00000563724 ANKK1Q8NFD2 765 aa7□□□□□ -1.29
LINC02516-201ENST00000563724 WNT2BQ93097 391 aa7□□□□□ -1.29
LINC02516-201ENST00000563724 LRCH3Q96II8 777 aa7□□□□□ -1.29
LINC02516-201ENST00000563724 RFC5P40937 340 aa6.99□□□□□ -1.29
LINC02516-201ENST00000563724 CLK2P49760 499 aaKnown RBP6.99□□□□□ -1.29
LINC02516-201ENST00000563724 MYSM1Q5VVJ2 828 aa6.99□□□□□ -1.29
LINC02516-201ENST00000563724 TMEM259Q4ZIN3 620 aa6.98□□□□□ -1.29
LINC02516-201ENST00000563724 FAM217BQ9NTX9 383 aaPredicted RBP6.98□□□□□ -1.29
LINC02516-201ENST00000563724 SULF1Q8IWU6 871 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms