RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 OATP04181 439 aa7.77□□□□□ -1.17
SHCBP1-202ENST00000563219 ZNF516Q92618 1163 aa7.76□□□□□ -1.17
SHCBP1-202ENST00000563219 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.75□□□□□ -1.17
SHCBP1-202ENST00000563219 GNPATO15228 680 aa7.75□□□□□ -1.17
SHCBP1-202ENST00000563219 PXYLP1Q8TE99 480 aa7.75□□□□□ -1.17
SHCBP1-202ENST00000563219 PRR14Q9BWN1 585 aa7.75□□□□□ -1.17
SHCBP1-202ENST00000563219 GPR37O15354 613 aa7.74□□□□□ -1.17
SHCBP1-202ENST00000563219 FECHP22830 423 aa7.74□□□□□ -1.17
SHCBP1-202ENST00000563219 METTL3Q86U44 580 aaKnown RBP7.73□□□□□ -1.17
SHCBP1-202ENST00000563219 COPS2P61201 443 aa7.72□□□□□ -1.17
SHCBP1-202ENST00000563219 PPP1R18Q6NYC8 613 aa7.72□□□□□ -1.17
SHCBP1-202ENST00000563219 IRX2Q9BZI1 471 aaPredicted RBP7.72□□□□□ -1.17
SHCBP1-202ENST00000563219 ZPR1O75312 459 aa7.71□□□□□ -1.18
SHCBP1-202ENST00000563219 NKX2-3Q8TAU0 364 aa7.71□□□□□ -1.18
SHCBP1-202ENST00000563219 PCDHB3Q9Y5E6 796 aa7.71□□□□□ -1.18
SHCBP1-202ENST00000563219 ACTN4O43707 911 aaKnown RBP7.7□□□□□ -1.18
SHCBP1-202ENST00000563219 SLC10A3P09131 477 aa7.7□□□□□ -1.18
SHCBP1-202ENST00000563219 KMT5BQ4FZB7 885 aa7.69□□□□□ -1.18
SHCBP1-202ENST00000563219 GPIHBP1Q8IV16 184 aa7.69□□□□□ -1.18
SHCBP1-202ENST00000563219 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.69□□□□□ -1.18
SHCBP1-202ENST00000563219 CFHP08603 1231 aa7.68□□□□□ -1.18
SHCBP1-202ENST00000563219 RSPH4AQ5TD94 716 aa7.68□□□□□ -1.18
SHCBP1-202ENST00000563219 BLOC1S3Q6QNY0 202 aa7.68□□□□□ -1.18
SHCBP1-202ENST00000563219 DAXXQ9UER7 740 aaPredicted RBP7.67□□□□□ -1.18
SHCBP1-202ENST00000563219 TULP1O00294 542 aaPredicted RBP7.66□□□□□ -1.18
SHCBP1-202ENST00000563219 GGCXP38435 758 aa7.66□□□□□ -1.18
SHCBP1-202ENST00000563219 TMUB1Q9BVT8 246 aa7.66□□□□□ -1.18
SHCBP1-202ENST00000563219 PHOX2BQ99453 314 aa7.65□□□□□ -1.18
SHCBP1-202ENST00000563219 PRKD2Q9BZL6 878 aa7.65□□□□□ -1.18
SHCBP1-202ENST00000563219 V9GY48 417 aaPredicted RBP7.64□□□□□ -1.19
SHCBP1-202ENST00000563219 NR1I2O75469 434 aa7.62□□□□□ -1.19
SHCBP1-202ENST00000563219 SCUBE3Q8IX30 993 aa7.62□□□□□ -1.19
SHCBP1-202ENST00000563219 NLRP7Q8WX94 980 aa7.62□□□□□ -1.19
SHCBP1-202ENST00000563219 DDX11L8A8MPP1 907 aa7.6□□□□□ -1.19
SHCBP1-202ENST00000563219 RNF223E7ERA6 249 aa7.6□□□□□ -1.19
SHCBP1-202ENST00000563219 IRF6O14896 467 aa7.6□□□□□ -1.19
SHCBP1-202ENST00000563219 TLL1O43897 1013 aa7.6□□□□□ -1.19
SHCBP1-202ENST00000563219 MAP2K5Q13163 448 aa7.6□□□□□ -1.19
SHCBP1-202ENST00000563219 LAPTM4AQ15012 233 aa7.6□□□□□ -1.19
SHCBP1-202ENST00000563219 SULF1Q8IWU6 871 aa7.6□□□□□ -1.19
SHCBP1-202ENST00000563219 RDH13Q8NBN7 331 aa7.6□□□□□ -1.19
SHCBP1-202ENST00000563219 GFRA3O60609 400 aa7.59□□□□□ -1.19
SHCBP1-202ENST00000563219 GCGRP47871 477 aa7.59□□□□□ -1.19
SHCBP1-202ENST00000563219 PUS10Q3MIT2 529 aaKnown RBP7.59□□□□□ -1.19
SHCBP1-202ENST00000563219 MINK1Q8N4C8 1332 aaPredicted RBP7.58□□□□□ -1.2
SHCBP1-202ENST00000563219 ADH1BP00325 375 aa7.58□□□□□ -1.2
SHCBP1-202ENST00000563219 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.58□□□□□ -1.2
SHCBP1-202ENST00000563219 S1PR4O95977 384 aa7.57□□□□□ -1.2
SHCBP1-202ENST00000563219 ATP6V1AP38606 617 aa7.57□□□□□ -1.2
SHCBP1-202ENST00000563219 FUT2Q10981 343 aa7.57□□□□□ -1.2
SHCBP1-202ENST00000563219 MORN1Q5T089 497 aa7.57□□□□□ -1.2
SHCBP1-202ENST00000563219 Q6ZNB5 142 aa7.57□□□□□ -1.2
SHCBP1-202ENST00000563219 ANKLE1Q8NAG6 615 aa7.57□□□□□ -1.2
SHCBP1-202ENST00000563219 SPSB2Q99619 263 aa7.56□□□□□ -1.2
SHCBP1-202ENST00000563219 PPEF1O14829 653 aaPredicted RBP7.55□□□□□ -1.2
SHCBP1-202ENST00000563219 SLC19A1P41440 591 aa7.55□□□□□ -1.2
SHCBP1-202ENST00000563219 EMID1Q96A84 441 aaPredicted RBP7.55□□□□□ -1.2
SHCBP1-202ENST00000563219 SLC6A16Q9GZN6 736 aa7.55□□□□□ -1.2
SHCBP1-202ENST00000563219 THAP11Q96EK4 314 aa7.54□□□□□ -1.2
SHCBP1-202ENST00000563219 SLC27A5Q9Y2P5 690 aa7.54□□□□□ -1.2
SHCBP1-202ENST00000563219 NRG2O14511 850 aaPredicted RBP7.53□□□□□ -1.2
SHCBP1-202ENST00000563219 SALL2Q9Y467 1007 aaPredicted RBP7.53□□□□□ -1.2
SHCBP1-202ENST00000563219 CD46P15529 392 aa7.52□□□□□ -1.21
SHCBP1-202ENST00000563219 MDM2Q00987 491 aaPredicted RBP7.52□□□□□ -1.21
SHCBP1-202ENST00000563219 GRIPAP1Q4V328 841 aa7.52□□□□□ -1.21
SHCBP1-202ENST00000563219 SPRYD7Q5W111 196 aa7.52□□□□□ -1.21
SHCBP1-202ENST00000563219 CCDC102AQ96A19 550 aa7.52□□□□□ -1.21
SHCBP1-202ENST00000563219 PDZRN3Q9UPQ7 1066 aa7.52□□□□□ -1.21
SHCBP1-202ENST00000563219 LMOD2Q6P5Q4 547 aa7.51□□□□□ -1.21
SHCBP1-202ENST00000563219 BRICD5Q6PL45 260 aa7.51□□□□□ -1.21
SHCBP1-202ENST00000563219 LIAT1Q6ZQX7 453 aa7.51□□□□□ -1.21
SHCBP1-202ENST00000563219 FMNL1O95466 1100 aaPredicted RBP7.5□□□□□ -1.21
SHCBP1-202ENST00000563219 ZNF598Q86UK7 904 aaKnown RBP7.5□□□□□ -1.21
SHCBP1-202ENST00000563219 FAM160A2Q8N612 972 aaPredicted RBP7.5□□□□□ -1.21
SHCBP1-202ENST00000563219 TRAF7Q6Q0C0 670 aa7.49□□□□□ -1.21
SHCBP1-202ENST00000563219 TRIM67Q6ZTA4 783 aa7.49□□□□□ -1.21
SHCBP1-202ENST00000563219 LCE2BO14633 110 aa7.48□□□□□ -1.21
SHCBP1-202ENST00000563219 KDM4AO75164 1064 aa7.48□□□□□ -1.21
SHCBP1-202ENST00000563219 CLCN1P35523 988 aa7.48□□□□□ -1.21
SHCBP1-202ENST00000563219 TPRNQ4KMQ1 711 aa7.48□□□□□ -1.21
SHCBP1-202ENST00000563219 PLA2G2CQ5R387 149 aa7.48□□□□□ -1.21
SHCBP1-202ENST00000563219 GPCPD1Q9NPB8 672 aa7.48□□□□□ -1.21
SHCBP1-202ENST00000563219 ZMYND10O75800 440 aa7.47□□□□□ -1.21
SHCBP1-202ENST00000563219 BARGINQ6ZT62 677 aa7.47□□□□□ -1.21
SHCBP1-202ENST00000563219 KRI1Q8N9T8 703 aaKnown RBP7.47□□□□□ -1.21
SHCBP1-202ENST00000563219 USP46P62068 366 aa7.46□□□□□ -1.22
SHCBP1-202ENST00000563219 Q3C1V9 767 aa7.46□□□□□ -1.22
SHCBP1-202ENST00000563219 ZNF697Q5TEC3 545 aa7.46□□□□□ -1.22
SHCBP1-202ENST00000563219 RNF19BQ6ZMZ0 732 aa7.46□□□□□ -1.22
SHCBP1-202ENST00000563219 FAM217BQ9NTX9 383 aaPredicted RBP7.46□□□□□ -1.22
SHCBP1-202ENST00000563219 PRKCSHP14314 528 aaPredicted RBP7.45□□□□□ -1.22
SHCBP1-202ENST00000563219 PRR20EP86478 221 aa7.45□□□□□ -1.22
SHCBP1-202ENST00000563219 PRR20CP86479 221 aa7.45□□□□□ -1.22
SHCBP1-202ENST00000563219 PRR20DP86480 221 aa7.45□□□□□ -1.22
SHCBP1-202ENST00000563219 PRR20BP86481 221 aa7.45□□□□□ -1.22
SHCBP1-202ENST00000563219 PRR20AP86496 221 aa7.45□□□□□ -1.22
SHCBP1-202ENST00000563219 MSS51Q4VC12 460 aa7.45□□□□□ -1.22
SHCBP1-202ENST00000563219 ZC3H15Q8WU90 426 aaKnown RBP7.45□□□□□ -1.22
SHCBP1-202ENST00000563219 GDF9O60383 454 aa7.44□□□□□ -1.22
SHCBP1-202ENST00000563219 RPIAP49247 311 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms