RNA–Protein interactions for RNA: ENST00000562875.5

KARS-203, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 3

Gene KARS, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-203ENST00000562875 TATDN2Q93075 761 aa12.18□□□□□ -0.46
KARS-203ENST00000562875 SLC4A5Q9BY07 1137 aa12.18□□□□□ -0.46
KARS-203ENST00000562875 BICRAQ9NZM4 1560 aa12.18□□□□□ -0.46
KARS-203ENST00000562875 MDM2Q00987 491 aaPredicted RBP12.17□□□□□ -0.46
KARS-203ENST00000562875 EYA1Q99502 592 aa12.17□□□□□ -0.46
KARS-203ENST00000562875 SMAPO00193 183 aa12.16□□□□□ -0.46
KARS-203ENST00000562875 CLCN1P35523 988 aa12.15□□□□□ -0.46
KARS-203ENST00000562875 RABGEF1Q9UJ41 708 aa12.15□□□□□ -0.46
KARS-203ENST00000562875 VPS9D1Q9Y2B5 631 aa12.15□□□□□ -0.46
KARS-203ENST00000562875 WRNQ14191 1432 aaPredicted RBP eCLIP12.14□□□□□ -0.47
KARS-203ENST00000562875 REPIN1Q9BWE0 567 aaKnown RBP12.14□□□□□ -0.47
KARS-203ENST00000562875 GPCPD1Q9NPB8 672 aa12.14□□□□□ -0.47
KARS-203ENST00000562875 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.13□□□□□ -0.47
KARS-203ENST00000562875 RCCD1A6NED2 376 aa12.13□□□□□ -0.47
KARS-203ENST00000562875 GIGYF2Q6Y7W6 1299 aaKnown RBP12.13□□□□□ -0.47
KARS-203ENST00000562875 LSM11P83369 360 aaKnown RBP eCLIP12.12□□□□□ -0.47
KARS-203ENST00000562875 GOLGA3Q08378 1498 aa12.11□□□□□ -0.47
KARS-203ENST00000562875 DNAJB2P25686 324 aa12.11□□□□□ -0.47
KARS-203ENST00000562875 TMUB1Q9BVT8 246 aa12.11□□□□□ -0.47
KARS-203ENST00000562875 SEPT9Q9UHD8 586 aaPredicted RBP12.11□□□□□ -0.47
KARS-203ENST00000562875 KIF21BO75037 1637 aa12.11□□□□□ -0.47
KARS-203ENST00000562875 TNIKQ9UKE5 1360 aa12.1□□□□□ -0.47
KARS-203ENST00000562875 TK2O00142 265 aa12.1□□□□□ -0.47
KARS-203ENST00000562875 TMEM132AQ24JP5 1023 aa12.09□□□□□ -0.47
KARS-203ENST00000562875 CEP162Q5TB80 1403 aa12.09□□□□□ -0.47
KARS-203ENST00000562875 ADGRD1Q6QNK2 874 aa12.08□□□□□ -0.48
KARS-203ENST00000562875 MS4A1P11836 297 aa12.07□□□□□ -0.48
KARS-203ENST00000562875 ANKRD13DQ6ZTN6 518 aa12.07□□□□□ -0.48
KARS-203ENST00000562875 IL27Q8NEV9 243 aa12.07□□□□□ -0.48
KARS-203ENST00000562875 FAM117AQ9C073 453 aa12.07□□□□□ -0.48
KARS-203ENST00000562875 NBPF3Q9H094 633 aa12.07□□□□□ -0.48
KARS-203ENST00000562875 BAZ1BQ9UIG0 1483 aaKnown RBP12.07□□□□□ -0.48
KARS-203ENST00000562875 TMEM134Q9H6X4 195 aa12.06□□□□□ -0.48
KARS-203ENST00000562875 DAXXQ9UER7 740 aaPredicted RBP12.06□□□□□ -0.48
KARS-203ENST00000562875 SSTR3P32745 418 aaPredicted RBP12.05□□□□□ -0.48
KARS-203ENST00000562875 FAM217BQ9NTX9 383 aaPredicted RBP12.05□□□□□ -0.48
KARS-203ENST00000562875 CEP164Q9UPV0 1460 aa12.05□□□□□ -0.48
KARS-203ENST00000562875 BHMG1C9JSJ3 638 aaPredicted RBP12.04□□□□□ -0.48
KARS-203ENST00000562875 FAM98CQ17RN3 349 aaKnown RBP12.04□□□□□ -0.48
KARS-203ENST00000562875 POTEGQ6S5H5 508 aa12.04□□□□□ -0.48
KARS-203ENST00000562875 LAPTM4BQ86VI4 370 aa12.03□□□□□ -0.48
KARS-203ENST00000562875 DDRGK1Q96HY6 314 aa12.03□□□□□ -0.48
KARS-203ENST00000562875 POTEMA6NI47 508 aa12.02□□□□□ -0.49
KARS-203ENST00000562875 MRPL50Q8N5N7 158 aaKnown RBP12.02□□□□□ -0.49
KARS-203ENST00000562875 KRTAP3-3Q9BYR6 98 aa12.02□□□□□ -0.49
KARS-203ENST00000562875 KRTAP3-2Q9BYR7 98 aa12.02□□□□□ -0.49
KARS-203ENST00000562875 PRDM2Q13029 1718 aa12.02□□□□□ -0.49
KARS-203ENST00000562875 SYNJ1O43426 1573 aa12.01□□□□□ -0.49
KARS-203ENST00000562875 CCER1Q8TC90 406 aaPredicted RBP12.01□□□□□ -0.49
KARS-203ENST00000562875 SOGA1O94964 1423 aa12.01□□□□□ -0.49
KARS-203ENST00000562875 HRO43593 1189 aa12□□□□□ -0.49
KARS-203ENST00000562875 HDGFP51858 240 aaKnown RBP12□□□□□ -0.49
KARS-203ENST00000562875 SWT1Q5T5J6 900 aaKnown RBP12□□□□□ -0.49
KARS-203ENST00000562875 STAC3Q96MF2 364 aa12□□□□□ -0.49
KARS-203ENST00000562875 ATAD2BQ9ULI0 1458 aa12□□□□□ -0.49
KARS-203ENST00000562875 BIVM-ERCC5R4GMW8 1640 aa12□□□□□ -0.49
KARS-203ENST00000562875 PLEKHG3A1L390 1219 aa11.99□□□□□ -0.49
KARS-203ENST00000562875 DDX11L8A8MPP1 907 aa11.99□□□□□ -0.49
KARS-203ENST00000562875 UBTFP17480 764 aaKnown RBP11.99□□□□□ -0.49
KARS-203ENST00000562875 SULF1Q8IWU6 871 aa11.99□□□□□ -0.49
KARS-203ENST00000562875 BEGAINQ9BUH8 593 aa11.99□□□□□ -0.49
KARS-203ENST00000562875 SAMD7Q7Z3H4 446 aa11.97□□□□□ -0.49
KARS-203ENST00000562875 ZFRQ96KR1 1074 aaKnown RBP11.97□□□□□ -0.49
KARS-203ENST00000562875 TOP2BQ02880 1626 aa11.97□□□□□ -0.49
KARS-203ENST00000562875 CDAN1Q8IWY9 1227 aa11.96□□□□□ -0.49
KARS-203ENST00000562875 RDH13Q8NBN7 331 aa11.95□□□□□ -0.5
KARS-203ENST00000562875 HMGXB3Q12766 1538 aa11.95□□□□□ -0.5
KARS-203ENST00000562875 GOLGA8CPA6NN73 597 aa11.94□□□□□ -0.5
KARS-203ENST00000562875 CD46P15529 392 aa11.94□□□□□ -0.5
KARS-203ENST00000562875 SLC4A3P48751 1232 aa11.93□□□□□ -0.5
KARS-203ENST00000562875 SLF2Q8IX21 1173 aa11.93□□□□□ -0.5
KARS-203ENST00000562875 RNF40O75150 1001 aa11.92□□□□□ -0.5
KARS-203ENST00000562875 RSPH4AQ5TD94 716 aa11.92□□□□□ -0.5
KARS-203ENST00000562875 RUSC2Q8N2Y8 1516 aa11.91□□□□□ -0.5
KARS-203ENST00000562875 SLC10A3P09131 477 aa11.9□□□□□ -0.5
KARS-203ENST00000562875 ANKK1Q8NFD2 765 aa11.9□□□□□ -0.5
KARS-203ENST00000562875 LRCH3Q96II8 777 aa11.9□□□□□ -0.5
KARS-203ENST00000562875 ERICH3Q5RHP9 1530 aa11.9□□□□□ -0.5
KARS-203ENST00000562875 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.89□□□□□ -0.51
KARS-203ENST00000562875 CLIP1P30622 1438 aa11.88□□□□□ -0.51
KARS-203ENST00000562875 RSPH6AQ9H0K4 717 aa11.88□□□□□ -0.51
KARS-203ENST00000562875 TBC1D2Q9BYX2 928 aa11.87□□□□□ -0.51
KARS-203ENST00000562875 VPS8Q8N3P4 1428 aa11.86□□□□□ -0.51
KARS-203ENST00000562875 SH3D19Q5HYK7 790 aa11.86□□□□□ -0.51
KARS-203ENST00000562875 NUTM1Q86Y26 1132 aa11.86□□□□□ -0.51
KARS-203ENST00000562875 WNT2BQ93097 391 aa11.86□□□□□ -0.51
KARS-203ENST00000562875 GCGRP47871 477 aa11.85□□□□□ -0.51
KARS-203ENST00000562875 DIXDC1Q155Q3 683 aa11.85□□□□□ -0.51
KARS-203ENST00000562875 SPIRE2Q8WWL2 714 aa11.85□□□□□ -0.51
KARS-203ENST00000562875 GOPCQ9HD26 462 aa11.85□□□□□ -0.51
KARS-203ENST00000562875 SOWAHBA6NEL2 793 aa11.84□□□□□ -0.51
KARS-203ENST00000562875 BCAMP50895 628 aa11.84□□□□□ -0.51
KARS-203ENST00000562875 KDM4AO75164 1064 aa11.83□□□□□ -0.52
KARS-203ENST00000562875 CFHP08603 1231 aa11.83□□□□□ -0.52
KARS-203ENST00000562875 MYSM1Q5VVJ2 828 aa11.83□□□□□ -0.52
KARS-203ENST00000562875 GTF3C3Q9Y5Q9 886 aa11.83□□□□□ -0.52
KARS-203ENST00000562875 CENPBP07199 599 aaPredicted RBP11.82□□□□□ -0.52
KARS-203ENST00000562875 SKIV2LQ15477 1246 aaKnown RBP11.82□□□□□ -0.52
KARS-203ENST00000562875 PCMTD1Q96MG8 357 aaPredicted RBP11.82□□□□□ -0.52
KARS-203ENST00000562875 POLR3EQ9NVU0 708 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms