RNA–Protein interactions for RNA: ENST00000562404.1

LPCAT4-202, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 3

Gene LPCAT4, Length 577 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-202ENST00000562404 SLC26A8Q96RN1 970 aa16.77■□□□□ 0.28
LPCAT4-202ENST00000562404 CLTCL1P53675 1640 aa16.77■□□□□ 0.27
LPCAT4-202ENST00000562404 CHGAP10645 457 aaKnown RBP16.76■□□□□ 0.27
LPCAT4-202ENST00000562404 NUTM2DQ5VT03 806 aaPredicted RBP16.75■□□□□ 0.27
LPCAT4-202ENST00000562404 CHD2O14647 1828 aaKnown RBP16.73■□□□□ 0.27
LPCAT4-202ENST00000562404 TRIM52Q96A61 297 aa16.73■□□□□ 0.27
LPCAT4-202ENST00000562404 TRPM2O94759 1503 aa16.73■□□□□ 0.27
LPCAT4-202ENST00000562404 PLEKHG1Q9ULL1 1385 aa16.72■□□□□ 0.27
LPCAT4-202ENST00000562404 KIF1BO60333 1816 aa16.71■□□□□ 0.27
LPCAT4-202ENST00000562404 NWD1Q149M9 1564 aa16.71■□□□□ 0.27
LPCAT4-202ENST00000562404 NRXN3Q9Y4C0 1643 aa16.7■□□□□ 0.26
LPCAT4-202ENST00000562404 ADAMTS13Q76LX8 1427 aa16.7■□□□□ 0.26
LPCAT4-202ENST00000562404 PPP1R15AO75807 674 aaPredicted RBP16.68■□□□□ 0.26
LPCAT4-202ENST00000562404 KCNA6P17658 529 aa16.68■□□□□ 0.26
LPCAT4-202ENST00000562404 PIP4K2BP78356 416 aa16.68■□□□□ 0.26
LPCAT4-202ENST00000562404 FOXD1Q16676 465 aa16.68■□□□□ 0.26
LPCAT4-202ENST00000562404 RBM33Q96EV2 1170 aaKnown RBP16.68■□□□□ 0.26
LPCAT4-202ENST00000562404 NEXMIFQ5QGS0 1516 aa16.67■□□□□ 0.26
LPCAT4-202ENST00000562404 BCANQ96GW7 911 aa16.67■□□□□ 0.26
LPCAT4-202ENST00000562404 SLC4A1APQ9BWU0 796 aaKnown RBP16.67■□□□□ 0.26
LPCAT4-202ENST00000562404 TOM1O60784 492 aa16.66■□□□□ 0.26
LPCAT4-202ENST00000562404 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.65■□□□□ 0.26
LPCAT4-202ENST00000562404 SCAF1Q9H7N4 1312 aaKnown RBP16.65■□□□□ 0.26
LPCAT4-202ENST00000562404 TMEM94Q12767 1356 aa16.64■□□□□ 0.26
LPCAT4-202ENST00000562404 HDGFP51858 240 aaKnown RBP16.64■□□□□ 0.25
LPCAT4-202ENST00000562404 TBX22Q9Y458 520 aa16.64■□□□□ 0.25
LPCAT4-202ENST00000562404 NKTRP30414 1462 aaKnown RBP16.63■□□□□ 0.25
LPCAT4-202ENST00000562404 DIP2AQ14689 1571 aa16.63■□□□□ 0.25
LPCAT4-202ENST00000562404 SETBP1Q9Y6X0 1596 aa16.63■□□□□ 0.25
LPCAT4-202ENST00000562404 PTPRUQ92729 1446 aa16.62■□□□□ 0.25
LPCAT4-202ENST00000562404 SETD5Q9C0A6 1442 aa16.62■□□□□ 0.25
LPCAT4-202ENST00000562404 HSPA1LP34931 641 aa16.62■□□□□ 0.25
LPCAT4-202ENST00000562404 ZNF326Q5BKZ1 582 aaKnown RBP16.62■□□□□ 0.25
LPCAT4-202ENST00000562404 PROSER2Q86WR7 435 aaPredicted RBP16.61■□□□□ 0.25
LPCAT4-202ENST00000562404 MPHOSPH9Q99550 1183 aa16.61■□□□□ 0.25
LPCAT4-202ENST00000562404 PPLO60437 1756 aa16.61■□□□□ 0.25
LPCAT4-202ENST00000562404 SETD1AO15047 1707 aaKnown RBP16.59■□□□□ 0.25
LPCAT4-202ENST00000562404 RAB3GAP2Q9H2M9 1393 aa16.59■□□□□ 0.25
LPCAT4-202ENST00000562404 XRN1Q8IZH2 1706 aaKnown RBP16.58■□□□□ 0.24
LPCAT4-202ENST00000562404 METP08581 1390 aa16.56■□□□□ 0.24
LPCAT4-202ENST00000562404 IFT172Q9UG01 1749 aa16.56■□□□□ 0.24
LPCAT4-202ENST00000562404 PIK3R4Q99570 1358 aa16.55■□□□□ 0.24
LPCAT4-202ENST00000562404 ROBO1Q9Y6N7 1651 aa16.55■□□□□ 0.24
LPCAT4-202ENST00000562404 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.54■□□□□ 0.24
LPCAT4-202ENST00000562404 AMOTL2Q9Y2J4 779 aa16.54■□□□□ 0.24
LPCAT4-202ENST00000562404 SPATA31E1Q6ZUB1 1445 aa16.53■□□□□ 0.24
LPCAT4-202ENST00000562404 CCDC144AA2RUR9 1427 aa16.53■□□□□ 0.24
LPCAT4-202ENST00000562404 DISP3Q9P2K9 1392 aa16.51■□□□□ 0.23
LPCAT4-202ENST00000562404 MSH6P52701 1360 aa16.51■□□□□ 0.23
LPCAT4-202ENST00000562404 FAM135BQ49AJ0 1406 aa16.5■□□□□ 0.23
LPCAT4-202ENST00000562404 RPGRIP1LQ68CZ1 1315 aa16.49■□□□□ 0.23
LPCAT4-202ENST00000562404 RGL3Q3MIN7 710 aa16.49■□□□□ 0.23
LPCAT4-202ENST00000562404 NCOA3Q9Y6Q9 1424 aa16.49■□□□□ 0.23
LPCAT4-202ENST00000562404 ADGRF5Q8IZF2 1346 aa16.48■□□□□ 0.23
LPCAT4-202ENST00000562404 MED1Q15648 1581 aaPredicted RBP16.48■□□□□ 0.23
LPCAT4-202ENST00000562404 VGFO15240 615 aaPredicted RBP16.48■□□□□ 0.23
LPCAT4-202ENST00000562404 NALCNQ8IZF0 1738 aa16.48■□□□□ 0.23
LPCAT4-202ENST00000562404 ILDR2Q71H61 639 aa16.47■□□□□ 0.23
LPCAT4-202ENST00000562404 SLAIN2Q9P270 581 aa16.46■□□□□ 0.23
LPCAT4-202ENST00000562404 C14orf37Q86TY3 774 aa16.44■□□□□ 0.22
LPCAT4-202ENST00000562404 C19orf44Q9H6X5 657 aa16.44■□□□□ 0.22
LPCAT4-202ENST00000562404 PHLPP1O60346 1717 aa16.44■□□□□ 0.22
LPCAT4-202ENST00000562404 ASXL1Q8IXJ9 1541 aa16.44■□□□□ 0.22
LPCAT4-202ENST00000562404 ACIN1Q9UKV3 1341 aaKnown RBP16.44■□□□□ 0.22
LPCAT4-202ENST00000562404 ANKRD30BQ9BXX2 1392 aa16.43■□□□□ 0.22
LPCAT4-202ENST00000562404 ROBO2Q9HCK4 1378 aa16.42■□□□□ 0.22
LPCAT4-202ENST00000562404 HRCP23327 699 aa16.41■□□□□ 0.22
LPCAT4-202ENST00000562404 PIK3C2GO75747 1445 aa16.4■□□□□ 0.22
LPCAT4-202ENST00000562404 PTCH1Q13635 1447 aa16.4■□□□□ 0.22
LPCAT4-202ENST00000562404 PRAG1Q86YV5 1406 aa16.4■□□□□ 0.22
LPCAT4-202ENST00000562404 ADGRL3Q9HAR2 1447 aa16.4■□□□□ 0.22
LPCAT4-202ENST00000562404 COL16A1Q07092 1604 aaPredicted RBP16.4■□□□□ 0.22
LPCAT4-202ENST00000562404 MST1RQ04912 1400 aa16.39■□□□□ 0.21
LPCAT4-202ENST00000562404 CADPS2Q86UW7 1296 aa16.39■□□□□ 0.21
LPCAT4-202ENST00000562404 DCCP43146 1447 aa16.38■□□□□ 0.21
LPCAT4-202ENST00000562404 NRXN1Q9ULB1 1477 aa16.38■□□□□ 0.21
LPCAT4-202ENST00000562404 ATF3P18847 181 aa16.38■□□□□ 0.21
LPCAT4-202ENST00000562404 TMEM132EQ6IEE7 984 aa16.37■□□□□ 0.21
LPCAT4-202ENST00000562404 KNDC1Q76NI1 1749 aa16.36■□□□□ 0.21
LPCAT4-202ENST00000562404 BRINP3Q76B58 766 aa16.36■□□□□ 0.21
LPCAT4-202ENST00000562404 AHDC1Q5TGY3 1603 aaPredicted RBP16.36■□□□□ 0.21
LPCAT4-202ENST00000562404 MYOM2P54296 1465 aa16.35■□□□□ 0.21
LPCAT4-202ENST00000562404 NHSL1Q5SYE7 1610 aa16.34■□□□□ 0.21
LPCAT4-202ENST00000562404 CFAP70Q5T0N1 1121 aa16.33■□□□□ 0.2
LPCAT4-202ENST00000562404 STK26Q9P289 416 aa16.33■□□□□ 0.2
LPCAT4-202ENST00000562404 PLEKHH1Q9ULM0 1364 aa16.33■□□□□ 0.2
LPCAT4-202ENST00000562404 TECPR2O15040 1411 aa16.33■□□□□ 0.2
LPCAT4-202ENST00000562404 LRPPRCP42704 1394 aaKnown RBP16.32■□□□□ 0.2
LPCAT4-202ENST00000562404 WAPLQ7Z5K2 1190 aa16.32■□□□□ 0.2
LPCAT4-202ENST00000562404 C14orf93Q9H972 538 aaKnown RBP16.32■□□□□ 0.2
LPCAT4-202ENST00000562404 LAMC1P11047 1609 aa16.31■□□□□ 0.2
LPCAT4-202ENST00000562404 C1orf167Q5SNV9 1468 aa16.31■□□□□ 0.2
LPCAT4-202ENST00000562404 YTHDC2Q9H6S0 1430 aaKnown RBP16.31■□□□□ 0.2
LPCAT4-202ENST00000562404 DDX17Q92841 729 aaKnown RBP16.31■□□□□ 0.2
LPCAT4-202ENST00000562404 DHX57Q6P158 1386 aaKnown RBP16.3■□□□□ 0.2
LPCAT4-202ENST00000562404 ABCC11Q96J66 1382 aa16.3■□□□□ 0.2
LPCAT4-202ENST00000562404 RGS17Q9UGC6 210 aaPredicted RBP16.3■□□□□ 0.2
LPCAT4-202ENST00000562404 SHPRHQ149N8 1683 aa16.29■□□□□ 0.2
LPCAT4-202ENST00000562404 CDC42BPGQ6DT37 1551 aa16.29■□□□□ 0.2
LPCAT4-202ENST00000562404 JCADQ9P266 1359 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms