RNA–Protein interactions for RNA: ENST00000562336.5

COX4I1-203, Transcript of cytochrome c oxidase subunit 4I1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COX4I1, Length 873 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX4I1-203ENST00000562336 ZFYVE9O95405 1425 aa40.56■■■■■ 4.08
COX4I1-203ENST00000562336 TMEM131LA2VDJ0 1609 aa40.56■■■■■ 4.08
COX4I1-203ENST00000562336 CHGAP10645 457 aaKnown RBP40.55■■■■■ 4.08
COX4I1-203ENST00000562336 RIMS2Q9UQ26 1411 aa40.54■■■■■ 4.08
COX4I1-203ENST00000562336 BCANQ96GW7 911 aa40.54■■■■■ 4.08
COX4I1-203ENST00000562336 KCNA6P17658 529 aa40.53■■■■■ 4.08
COX4I1-203ENST00000562336 XIRP1Q702N8 1843 aaKnown RBP40.52■■■■■ 4.08
COX4I1-203ENST00000562336 PPP1R15AO75807 674 aaPredicted RBP40.47■■■■■ 4.07
COX4I1-203ENST00000562336 PLEKHG1Q9ULL1 1385 aa40.47■■■■■ 4.07
COX4I1-203ENST00000562336 TMEM94Q12767 1356 aa40.45■■■■■ 4.07
COX4I1-203ENST00000562336 HDGFP51858 240 aaKnown RBP40.44■■■■■ 4.06
COX4I1-203ENST00000562336 RBM33Q96EV2 1170 aaKnown RBP40.44■■■■■ 4.06
COX4I1-203ENST00000562336 NUTM2DQ5VT03 806 aaPredicted RBP40.43■■■■■ 4.06
COX4I1-203ENST00000562336 PROSER2Q86WR7 435 aaPredicted RBP40.42■■■■■ 4.06
COX4I1-203ENST00000562336 NAIPQ13075 1403 aa40.4■■■■■ 4.06
COX4I1-203ENST00000562336 ABCF1Q8NE71 845 aaKnown RBP eCLIP40.39■■■■■ 4.06
COX4I1-203ENST00000562336 NWD1Q149M9 1564 aa40.37■■■■■ 4.05
COX4I1-203ENST00000562336 NKTRP30414 1462 aaKnown RBP40.32■■■■■ 4.05
COX4I1-203ENST00000562336 TBX22Q9Y458 520 aa40.32■■■■■ 4.05
COX4I1-203ENST00000562336 SPHKAPQ2M3C7 1700 aa40.3■■■■■ 4.04
COX4I1-203ENST00000562336 MED1Q15648 1581 aaPredicted RBP40.29■■■■■ 4.04
COX4I1-203ENST00000562336 ADAMTS13Q76LX8 1427 aa40.29■■■■■ 4.04
COX4I1-203ENST00000562336 CHD2O14647 1828 aaKnown RBP40.27■■■■■ 4.04
COX4I1-203ENST00000562336 HFM1A2PYH4 1435 aa40.23■■■■■ 4.03
COX4I1-203ENST00000562336 FAM135BQ49AJ0 1406 aa40.21■■■■■ 4.03
COX4I1-203ENST00000562336 TRIM52Q96A61 297 aa40.2■■■■■ 4.03
COX4I1-203ENST00000562336 SOCS7O14512 581 aa40.19■■■■■ 4.02
COX4I1-203ENST00000562336 ZNF326Q5BKZ1 582 aaKnown RBP40.18■■■■■ 4.02
COX4I1-203ENST00000562336 MSH6P52701 1360 aa40.17■■■■■ 4.02
COX4I1-203ENST00000562336 CLTCL1P53675 1640 aa40.16■■■■■ 4.02
COX4I1-203ENST00000562336 DIP2AQ14689 1571 aa40.16■■■■■ 4.02
COX4I1-203ENST00000562336 TRPM2O94759 1503 aa40.13■■■■■ 4.01
COX4I1-203ENST00000562336 PIK3R4Q99570 1358 aa40.11■■■■■ 4.01
COX4I1-203ENST00000562336 ROBO1Q9Y6N7 1651 aa40.1■■■■■ 4.01
COX4I1-203ENST00000562336 PTPRUQ92729 1446 aa40.09■■■■■ 4.01
COX4I1-203ENST00000562336 NRXN3Q9Y4C0 1643 aa40.07■■■■■ 4.01
COX4I1-203ENST00000562336 SLAIN2Q9P270 581 aa40.07■■■■■ 4.01
COX4I1-203ENST00000562336 AMOTL2Q9Y2J4 779 aa40.07■■■■■ 4.01
COX4I1-203ENST00000562336 SLC4A1APQ9BWU0 796 aaKnown RBP40.06■■■■■ 4
COX4I1-203ENST00000562336 C14orf37Q86TY3 774 aa40.04■■■■■ 4
COX4I1-203ENST00000562336 NCOA3Q9Y6Q9 1424 aa40.04■■■■■ 4
COX4I1-203ENST00000562336 SETBP1Q9Y6X0 1596 aa40.03■■■■■ 4
COX4I1-203ENST00000562336 NEXMIFQ5QGS0 1516 aa40.02■■■■■ 4
COX4I1-203ENST00000562336 PHF23Q9BUL5 403 aaPredicted RBP40.02■■■■■ 4
COX4I1-203ENST00000562336 KIF1BO60333 1816 aa39.98■■■■□ 3.99
COX4I1-203ENST00000562336 METP08581 1390 aa39.97■■■■□ 3.99
COX4I1-203ENST00000562336 FOXD1Q16676 465 aa39.94■■■■□ 3.98
COX4I1-203ENST00000562336 C19orf44Q9H6X5 657 aa39.94■■■■□ 3.98
COX4I1-203ENST00000562336 SIPA1L2Q9P2F8 1722 aaPredicted RBP39.93■■■■□ 3.98
COX4I1-203ENST00000562336 XRN1Q8IZH2 1706 aaKnown RBP39.91■■■■□ 3.98
COX4I1-203ENST00000562336 CADPS2Q86UW7 1296 aa39.89■■■■□ 3.98
COX4I1-203ENST00000562336 ATF3P18847 181 aa39.88■■■■□ 3.97
COX4I1-203ENST00000562336 PHLPP1O60346 1717 aa39.85■■■■□ 3.97
COX4I1-203ENST00000562336 VGFO15240 615 aaPredicted RBP39.82■■■■□ 3.97
COX4I1-203ENST00000562336 RGS17Q9UGC6 210 aaPredicted RBP39.82■■■■□ 3.97
COX4I1-203ENST00000562336 MPHOSPH9Q99550 1183 aa39.8■■■■□ 3.96
COX4I1-203ENST00000562336 RPGRIP1LQ68CZ1 1315 aa39.79■■■■□ 3.96
COX4I1-203ENST00000562336 COL16A1Q07092 1604 aaPredicted RBP39.74■■■■□ 3.95
COX4I1-203ENST00000562336 DCCP43146 1447 aa39.74■■■■□ 3.95
COX4I1-203ENST00000562336 JCADQ9P266 1359 aa39.73■■■■□ 3.95
COX4I1-203ENST00000562336 BRINP3Q76B58 766 aa39.72■■■■□ 3.95
COX4I1-203ENST00000562336 PPLO60437 1756 aa39.72■■■■□ 3.95
COX4I1-203ENST00000562336 SETD1AO15047 1707 aaKnown RBP39.71■■■■□ 3.95
COX4I1-203ENST00000562336 CCDC144AA2RUR9 1427 aa39.7■■■■□ 3.95
COX4I1-203ENST00000562336 ADGRL3Q9HAR2 1447 aa39.68■■■■□ 3.94
COX4I1-203ENST00000562336 AHDC1Q5TGY3 1603 aaPredicted RBP39.68■■■■□ 3.94
COX4I1-203ENST00000562336 MST1RQ04912 1400 aa39.67■■■■□ 3.94
COX4I1-203ENST00000562336 RGL3Q3MIN7 710 aa39.67■■■■□ 3.94
COX4I1-203ENST00000562336 SETD5Q9C0A6 1442 aa39.66■■■■□ 3.94
COX4I1-203ENST00000562336 NALCNQ8IZF0 1738 aa39.63■■■■□ 3.94
COX4I1-203ENST00000562336 ROBO2Q9HCK4 1378 aa39.63■■■■□ 3.93
COX4I1-203ENST00000562336 SPATA31E1Q6ZUB1 1445 aa39.63■■■■□ 3.93
COX4I1-203ENST00000562336 ADGRF5Q8IZF2 1346 aa39.63■■■■□ 3.93
COX4I1-203ENST00000562336 POTEAQ6S8J7 498 aa39.61■■■■□ 3.93
COX4I1-203ENST00000562336 PTCH1Q13635 1447 aa39.6■■■■□ 3.93
COX4I1-203ENST00000562336 ASXL1Q8IXJ9 1541 aa39.6■■■■□ 3.93
COX4I1-203ENST00000562336 RAB3GAP2Q9H2M9 1393 aa39.54■■■■□ 3.92
COX4I1-203ENST00000562336 LRP6O75581 1613 aa39.54■■■■□ 3.92
COX4I1-203ENST00000562336 PRAG1Q86YV5 1406 aa39.53■■■■□ 3.92
COX4I1-203ENST00000562336 SPATA31A6Q5VVP1 1343 aa39.52■■■■□ 3.92
COX4I1-203ENST00000562336 ACIN1Q9UKV3 1341 aaKnown RBP39.51■■■■□ 3.92
COX4I1-203ENST00000562336 DDX17Q92841 729 aaKnown RBP39.51■■■■□ 3.92
COX4I1-203ENST00000562336 ANKRD30BQ9BXX2 1392 aa39.5■■■■□ 3.91
COX4I1-203ENST00000562336 IFT172Q9UG01 1749 aa39.5■■■■□ 3.91
COX4I1-203ENST00000562336 SHPRHQ149N8 1683 aa39.48■■■■□ 3.91
COX4I1-203ENST00000562336 C1orf167Q5SNV9 1468 aa39.48■■■■□ 3.91
COX4I1-203ENST00000562336 NHSL1Q5SYE7 1610 aa39.47■■■■□ 3.91
COX4I1-203ENST00000562336 STK26Q9P289 416 aa39.43■■■■□ 3.9
COX4I1-203ENST00000562336 MEX3CQ5U5Q3 659 aaKnown RBP39.42■■■■□ 3.9
COX4I1-203ENST00000562336 TMEM132EQ6IEE7 984 aa39.41■■■■□ 3.9
COX4I1-203ENST00000562336 NUTM2BA6NNL0 878 aaPredicted RBP39.4■■■■□ 3.9
COX4I1-203ENST00000562336 NUTM2EB1AL46 878 aaPredicted RBP39.4■■■■□ 3.9
COX4I1-203ENST00000562336 NUTM2AQ8IVF1 878 aaPredicted RBP39.4■■■■□ 3.9
COX4I1-203ENST00000562336 ORAI2Q96SN7 254 aa39.4■■■■□ 3.9
COX4I1-203ENST00000562336 PIK3C2GO75747 1445 aa39.4■■■■□ 3.9
COX4I1-203ENST00000562336 LRRC59Q96AG4 307 aaKnown RBP39.38■■■■□ 3.89
COX4I1-203ENST00000562336 WAPLQ7Z5K2 1190 aa39.37■■■■□ 3.89
COX4I1-203ENST00000562336 LRPPRCP42704 1394 aaKnown RBP39.36■■■■□ 3.89
COX4I1-203ENST00000562336 TECPR2O15040 1411 aa39.33■■■■□ 3.89
COX4I1-203ENST00000562336 ABCC11Q96J66 1382 aa39.32■■■■□ 3.88
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms