RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 CLTCL1P53675 1640 aa26.1■■□□□ 1.77
CDC42BPB-208ENST00000561271 RIMS2Q9UQ26 1411 aa26.1■■□□□ 1.77
CDC42BPB-208ENST00000561271 HFM1A2PYH4 1435 aa26.09■■□□□ 1.77
CDC42BPB-208ENST00000561271 TRPM2O94759 1503 aa26.05■■□□□ 1.76
CDC42BPB-208ENST00000561271 CHGAP10645 457 aaKnown RBP26.05■■□□□ 1.76
CDC42BPB-208ENST00000561271 SCAF1Q9H7N4 1312 aaKnown RBP26.05■■□□□ 1.76
CDC42BPB-208ENST00000561271 SENP3Q9H4L4 574 aaPredicted RBP26.04■■□□□ 1.76
CDC42BPB-208ENST00000561271 SLC26A8Q96RN1 970 aa26.03■■□□□ 1.76
CDC42BPB-208ENST00000561271 PLEKHG1Q9ULL1 1385 aa26.03■■□□□ 1.76
CDC42BPB-208ENST00000561271 PIP4K2BP78356 416 aa26.02■■□□□ 1.76
CDC42BPB-208ENST00000561271 TOM1O60784 492 aa26.01■■□□□ 1.75
CDC42BPB-208ENST00000561271 DIP2AQ14689 1571 aa26.01■■□□□ 1.75
CDC42BPB-208ENST00000561271 NRXN3Q9Y4C0 1643 aa26■■□□□ 1.75
CDC42BPB-208ENST00000561271 NKTRP30414 1462 aaKnown RBP26■■□□□ 1.75
CDC42BPB-208ENST00000561271 PPP1R15AO75807 674 aaPredicted RBP26■■□□□ 1.75
CDC42BPB-208ENST00000561271 BCANQ96GW7 911 aa25.99■■□□□ 1.75
CDC42BPB-208ENST00000561271 NUTM2DQ5VT03 806 aaPredicted RBP25.96■■□□□ 1.75
CDC42BPB-208ENST00000561271 ADAMTS13Q76LX8 1427 aa25.94■■□□□ 1.74
CDC42BPB-208ENST00000561271 NEXMIFQ5QGS0 1516 aa25.93■■□□□ 1.74
CDC42BPB-208ENST00000561271 KCNA6P17658 529 aa25.93■■□□□ 1.74
CDC42BPB-208ENST00000561271 TMEM94Q12767 1356 aa25.93■■□□□ 1.74
CDC42BPB-208ENST00000561271 HDGFP51858 240 aaKnown RBP25.92■■□□□ 1.74
CDC42BPB-208ENST00000561271 TRIM52Q96A61 297 aa25.92■■□□□ 1.74
CDC42BPB-208ENST00000561271 DISP3Q9P2K9 1392 aa25.92■■□□□ 1.74
CDC42BPB-208ENST00000561271 SETBP1Q9Y6X0 1596 aa25.91■■□□□ 1.74
CDC42BPB-208ENST00000561271 HSPA1LP34931 641 aa25.91■■□□□ 1.74
CDC42BPB-208ENST00000561271 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.91■■□□□ 1.74
CDC42BPB-208ENST00000561271 PPLO60437 1756 aa25.91■■□□□ 1.74
CDC42BPB-208ENST00000561271 ROBO1Q9Y6N7 1651 aa25.9■■□□□ 1.74
CDC42BPB-208ENST00000561271 XRN1Q8IZH2 1706 aaKnown RBP25.89■■□□□ 1.74
CDC42BPB-208ENST00000561271 RBM33Q96EV2 1170 aaKnown RBP25.87■■□□□ 1.73
CDC42BPB-208ENST00000561271 MED1Q15648 1581 aaPredicted RBP25.86■■□□□ 1.73
CDC42BPB-208ENST00000561271 SETD1AO15047 1707 aaKnown RBP25.86■■□□□ 1.73
CDC42BPB-208ENST00000561271 PROSER2Q86WR7 435 aaPredicted RBP25.86■■□□□ 1.73
CDC42BPB-208ENST00000561271 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.84■■□□□ 1.73
CDC42BPB-208ENST00000561271 ZNF326Q5BKZ1 582 aaKnown RBP25.83■■□□□ 1.73
CDC42BPB-208ENST00000561271 SLC4A1APQ9BWU0 796 aaKnown RBP25.83■■□□□ 1.73
CDC42BPB-208ENST00000561271 TBX22Q9Y458 520 aa25.83■■□□□ 1.73
CDC42BPB-208ENST00000561271 IFT172Q9UG01 1749 aa25.83■■□□□ 1.72
CDC42BPB-208ENST00000561271 PIK3R4Q99570 1358 aa25.79■■□□□ 1.72
CDC42BPB-208ENST00000561271 PTPRUQ92729 1446 aa25.79■■□□□ 1.72
CDC42BPB-208ENST00000561271 MSH6P52701 1360 aa25.78■■□□□ 1.72
CDC42BPB-208ENST00000561271 PHLPP1O60346 1717 aa25.77■■□□□ 1.72
CDC42BPB-208ENST00000561271 NALCNQ8IZF0 1738 aa25.75■■□□□ 1.71
CDC42BPB-208ENST00000561271 FOXD1Q16676 465 aa25.75■■□□□ 1.71
CDC42BPB-208ENST00000561271 FAM135BQ49AJ0 1406 aa25.72■■□□□ 1.71
CDC42BPB-208ENST00000561271 SETD5Q9C0A6 1442 aa25.71■■□□□ 1.71
CDC42BPB-208ENST00000561271 METP08581 1390 aa25.69■■□□□ 1.7
CDC42BPB-208ENST00000561271 ILDR2Q71H61 639 aa25.69■■□□□ 1.7
CDC42BPB-208ENST00000561271 CCDC144AA2RUR9 1427 aa25.69■■□□□ 1.7
CDC42BPB-208ENST00000561271 NCOA3Q9Y6Q9 1424 aa25.69■■□□□ 1.7
CDC42BPB-208ENST00000561271 AMOTL2Q9Y2J4 779 aa25.68■■□□□ 1.7
CDC42BPB-208ENST00000561271 C14orf37Q86TY3 774 aa25.67■■□□□ 1.7
CDC42BPB-208ENST00000561271 MPHOSPH9Q99550 1183 aa25.67■■□□□ 1.7
CDC42BPB-208ENST00000561271 RAB3GAP2Q9H2M9 1393 aa25.65■■□□□ 1.7
CDC42BPB-208ENST00000561271 COL16A1Q07092 1604 aaPredicted RBP25.64■■□□□ 1.7
CDC42BPB-208ENST00000561271 SPATA31E1Q6ZUB1 1445 aa25.63■■□□□ 1.69
CDC42BPB-208ENST00000561271 SLAIN2Q9P270 581 aa25.6■■□□□ 1.69
CDC42BPB-208ENST00000561271 RPGRIP1LQ68CZ1 1315 aa25.6■■□□□ 1.69
CDC42BPB-208ENST00000561271 AHDC1Q5TGY3 1603 aaPredicted RBP25.59■■□□□ 1.69
CDC42BPB-208ENST00000561271 KNDC1Q76NI1 1749 aa25.58■■□□□ 1.69
CDC42BPB-208ENST00000561271 DCCP43146 1447 aa25.58■■□□□ 1.69
CDC42BPB-208ENST00000561271 VGFO15240 615 aaPredicted RBP25.58■■□□□ 1.69
CDC42BPB-208ENST00000561271 NHSL1Q5SYE7 1610 aa25.58■■□□□ 1.69
CDC42BPB-208ENST00000561271 C19orf44Q9H6X5 657 aa25.57■■□□□ 1.68
CDC42BPB-208ENST00000561271 PTCH1Q13635 1447 aa25.56■■□□□ 1.68
CDC42BPB-208ENST00000561271 ADGRL3Q9HAR2 1447 aa25.56■■□□□ 1.68
CDC42BPB-208ENST00000561271 ATF3P18847 181 aa25.55■■□□□ 1.68
CDC42BPB-208ENST00000561271 CADPS2Q86UW7 1296 aa25.55■■□□□ 1.68
CDC42BPB-208ENST00000561271 ASXL1Q8IXJ9 1541 aa25.54■■□□□ 1.68
CDC42BPB-208ENST00000561271 ACIN1Q9UKV3 1341 aaKnown RBP25.54■■□□□ 1.68
CDC42BPB-208ENST00000561271 SHPRHQ149N8 1683 aa25.54■■□□□ 1.68
CDC42BPB-208ENST00000561271 PRAG1Q86YV5 1406 aa25.53■■□□□ 1.68
CDC42BPB-208ENST00000561271 RGL3Q3MIN7 710 aa25.52■■□□□ 1.68
CDC42BPB-208ENST00000561271 MST1RQ04912 1400 aa25.52■■□□□ 1.68
CDC42BPB-208ENST00000561271 LAMC1P11047 1609 aa25.52■■□□□ 1.68
CDC42BPB-208ENST00000561271 ADGRF5Q8IZF2 1346 aa25.5■■□□□ 1.67
CDC42BPB-208ENST00000561271 PHF23Q9BUL5 403 aaPredicted RBP25.5■■□□□ 1.67
CDC42BPB-208ENST00000561271 ROBO2Q9HCK4 1378 aa25.5■■□□□ 1.67
CDC42BPB-208ENST00000561271 ANKRD30BQ9BXX2 1392 aa25.49■■□□□ 1.67
CDC42BPB-208ENST00000561271 PIK3C2GO75747 1445 aa25.48■■□□□ 1.67
CDC42BPB-208ENST00000561271 MYOM2P54296 1465 aa25.45■■□□□ 1.66
CDC42BPB-208ENST00000561271 CDC42BPGQ6DT37 1551 aa25.44■■□□□ 1.66
CDC42BPB-208ENST00000561271 JCADQ9P266 1359 aa25.44■■□□□ 1.66
CDC42BPB-208ENST00000561271 BRINP3Q76B58 766 aa25.43■■□□□ 1.66
CDC42BPB-208ENST00000561271 NRXN1Q9ULB1 1477 aa25.42■■□□□ 1.66
CDC42BPB-208ENST00000561271 SOCS7O14512 581 aa25.42■■□□□ 1.66
CDC42BPB-208ENST00000561271 TECPR2O15040 1411 aa25.39■■□□□ 1.66
CDC42BPB-208ENST00000561271 RGPD8O14715 1765 aaPredicted RBP25.39■■□□□ 1.66
CDC42BPB-208ENST00000561271 FMN2Q9NZ56 1722 aa25.39■■□□□ 1.65
CDC42BPB-208ENST00000561271 LRP6O75581 1613 aa25.38■■□□□ 1.65
CDC42BPB-208ENST00000561271 C1orf167Q5SNV9 1468 aa25.38■■□□□ 1.65
CDC42BPB-208ENST00000561271 LRPPRCP42704 1394 aaKnown RBP25.36■■□□□ 1.65
CDC42BPB-208ENST00000561271 YTHDC2Q9H6S0 1430 aaKnown RBP25.34■■□□□ 1.65
CDC42BPB-208ENST00000561271 TMEM132EQ6IEE7 984 aa25.33■■□□□ 1.65
CDC42BPB-208ENST00000561271 STK26Q9P289 416 aa25.33■■□□□ 1.65
CDC42BPB-208ENST00000561271 RGS17Q9UGC6 210 aaPredicted RBP25.33■■□□□ 1.65
CDC42BPB-208ENST00000561271 HRCP23327 699 aa25.31■■□□□ 1.64
CDC42BPB-208ENST00000561271 PLEKHH1Q9ULM0 1364 aa25.31■■□□□ 1.64
CDC42BPB-208ENST00000561271 ABCC11Q96J66 1382 aa25.3■■□□□ 1.64
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