RNA–Protein interactions for RNA: ENST00000560940.5

AP3S2-214, Transcript of adaptor related protein complex 3 subunit sigma 2, humanhuman

TSL 5 BASIC

Gene AP3S2, Length 519 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2-214ENST00000560940 SLC52A1Q9NWF4 448 aa10.69□□□□□ -0.7
AP3S2-214ENST00000560940 MYO5BQ9ULV0 1848 aa10.69□□□□□ -0.7
AP3S2-214ENST00000560940 RPRD2Q5VT52 1461 aaKnown RBP10.68□□□□□ -0.7
AP3S2-214ENST00000560940 APLP2Q06481 763 aa10.68□□□□□ -0.7
AP3S2-214ENST00000560940 POTEAQ6S8J7 498 aa10.68□□□□□ -0.7
AP3S2-214ENST00000560940 SLAIN2Q9P270 581 aa10.67□□□□□ -0.7
AP3S2-214ENST00000560940 GCC2Q8IWJ2 1684 aa10.66□□□□□ -0.7
AP3S2-214ENST00000560940 JCADQ9P266 1359 aa10.66□□□□□ -0.7
AP3S2-214ENST00000560940 LOC105371045A0A1W2PR82 267 aa10.66□□□□□ -0.7
AP3S2-214ENST00000560940 HDGFP51858 240 aaKnown RBP10.66□□□□□ -0.7
AP3S2-214ENST00000560940 ADGRL2O95490 1459 aa10.66□□□□□ -0.7
AP3S2-214ENST00000560940 NCOA3Q9Y6Q9 1424 aa10.66□□□□□ -0.7
AP3S2-214ENST00000560940 PLEKHG1Q9ULL1 1385 aa10.65□□□□□ -0.7
AP3S2-214ENST00000560940 BCANQ96GW7 911 aa10.65□□□□□ -0.7
AP3S2-214ENST00000560940 ZFYVE9O95405 1425 aa10.65□□□□□ -0.7
AP3S2-214ENST00000560940 TMEM131LA2VDJ0 1609 aa10.65□□□□□ -0.7
AP3S2-214ENST00000560940 COL16A1Q07092 1604 aaPredicted RBP10.65□□□□□ -0.7
AP3S2-214ENST00000560940 SETD1AO15047 1707 aaKnown RBP10.64□□□□□ -0.71
AP3S2-214ENST00000560940 MSH5O43196 834 aa10.64□□□□□ -0.71
AP3S2-214ENST00000560940 RBM33Q96EV2 1170 aaKnown RBP10.64□□□□□ -0.71
AP3S2-214ENST00000560940 CHIC2Q9UKJ5 165 aa10.64□□□□□ -0.71
AP3S2-214ENST00000560940 DIP2AQ14689 1571 aa10.63□□□□□ -0.71
AP3S2-214ENST00000560940 SHPRHQ149N8 1683 aa10.63□□□□□ -0.71
AP3S2-214ENST00000560940 SPATA31A6Q5VVP1 1343 aa10.62□□□□□ -0.71
AP3S2-214ENST00000560940 ANKRD50Q9ULJ7 1429 aa10.62□□□□□ -0.71
AP3S2-214ENST00000560940 RIMS2Q9UQ26 1411 aa10.62□□□□□ -0.71
AP3S2-214ENST00000560940 PPP1R15AO75807 674 aaPredicted RBP10.62□□□□□ -0.71
AP3S2-214ENST00000560940 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.62□□□□□ -0.71
AP3S2-214ENST00000560940 TBX22Q9Y458 520 aa10.62□□□□□ -0.71
AP3S2-214ENST00000560940 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.61□□□□□ -0.71
AP3S2-214ENST00000560940 AHDC1Q5TGY3 1603 aaPredicted RBP10.61□□□□□ -0.71
AP3S2-214ENST00000560940 PIK3R4Q99570 1358 aa10.61□□□□□ -0.71
AP3S2-214ENST00000560940 UNC13BO14795 1591 aa10.6□□□□□ -0.71
AP3S2-214ENST00000560940 CADPS2Q86UW7 1296 aa10.6□□□□□ -0.71
AP3S2-214ENST00000560940 ZNF772Q68DY9 489 aaPredicted RBP10.59□□□□□ -0.71
AP3S2-214ENST00000560940 C14orf37Q86TY3 774 aa10.59□□□□□ -0.71
AP3S2-214ENST00000560940 C19orf44Q9H6X5 657 aa10.59□□□□□ -0.71
AP3S2-214ENST00000560940 E9PCH4 1651 aa10.59□□□□□ -0.71
AP3S2-214ENST00000560940 ATF3P18847 181 aa10.58□□□□□ -0.72
AP3S2-214ENST00000560940 LRP6O75581 1613 aa10.58□□□□□ -0.72
AP3S2-214ENST00000560940 TRPM2O94759 1503 aa10.58□□□□□ -0.72
AP3S2-214ENST00000560940 ADAMTS13Q76LX8 1427 aa10.58□□□□□ -0.72
AP3S2-214ENST00000560940 MEX3CQ5U5Q3 659 aaKnown RBP10.57□□□□□ -0.72
AP3S2-214ENST00000560940 IQGAP3Q86VI3 1631 aa10.57□□□□□ -0.72
AP3S2-214ENST00000560940 FAM50AQ14320 339 aaKnown RBP10.56□□□□□ -0.72
AP3S2-214ENST00000560940 DCCP43146 1447 aa10.56□□□□□ -0.72
AP3S2-214ENST00000560940 CHGAP10645 457 aaKnown RBP10.55□□□□□ -0.72
AP3S2-214ENST00000560940 CDK12Q9NYV4 1490 aaPredicted RBP10.55□□□□□ -0.72
AP3S2-214ENST00000560940 UPF1Q92900 1129 aaKnown RBP eCLIP10.54□□□□□ -0.725e-8■■■■□ 22.6
AP3S2-214ENST00000560940 NHSL1Q5SYE7 1610 aa10.54□□□□□ -0.72
AP3S2-214ENST00000560940 XRN1Q8IZH2 1706 aaKnown RBP10.53□□□□□ -0.72
AP3S2-214ENST00000560940 RXRBP28702 533 aa10.53□□□□□ -0.72
AP3S2-214ENST00000560940 BRINP3Q76B58 766 aa10.53□□□□□ -0.72
AP3S2-214ENST00000560940 ROCK1Q13464 1354 aa10.52□□□□□ -0.72
AP3S2-214ENST00000560940 PPP4R3CPQ6ZMV5 832 aa10.52□□□□□ -0.73
AP3S2-214ENST00000560940 TRIM52Q96A61 297 aa10.52□□□□□ -0.73
AP3S2-214ENST00000560940 AMOTL2Q9Y2J4 779 aa10.52□□□□□ -0.73
AP3S2-214ENST00000560940 ASXL1Q8IXJ9 1541 aa10.52□□□□□ -0.73
AP3S2-214ENST00000560940 SETBP1Q9Y6X0 1596 aa10.52□□□□□ -0.73
AP3S2-214ENST00000560940 SETD5Q9C0A6 1442 aa10.51□□□□□ -0.73
AP3S2-214ENST00000560940 SPHKAPQ2M3C7 1700 aa10.51□□□□□ -0.73
AP3S2-214ENST00000560940 NUTM2DQ5VT03 806 aaPredicted RBP10.51□□□□□ -0.73
AP3S2-214ENST00000560940 NRXN3Q9Y4C0 1643 aa10.51□□□□□ -0.73
AP3S2-214ENST00000560940 PTPRUQ92729 1446 aa10.5□□□□□ -0.73
AP3S2-214ENST00000560940 NUTM2BA6NNL0 878 aaPredicted RBP10.49□□□□□ -0.73
AP3S2-214ENST00000560940 NUTM2EB1AL46 878 aaPredicted RBP10.49□□□□□ -0.73
AP3S2-214ENST00000560940 NUTM2AQ8IVF1 878 aaPredicted RBP10.49□□□□□ -0.73
AP3S2-214ENST00000560940 LRRC59Q96AG4 307 aaKnown RBP10.49□□□□□ -0.73
AP3S2-214ENST00000560940 NUP155O75694 1391 aa10.49□□□□□ -0.73
AP3S2-214ENST00000560940 MST1RQ04912 1400 aa10.49□□□□□ -0.73
AP3S2-214ENST00000560940 AFF2P51816 1311 aa10.48□□□□□ -0.73
AP3S2-214ENST00000560940 NALCNQ8IZF0 1738 aa10.47□□□□□ -0.73
AP3S2-214ENST00000560940 ADGRL3Q9HAR2 1447 aa10.47□□□□□ -0.73
AP3S2-214ENST00000560940 LAMC1P11047 1609 aa10.47□□□□□ -0.73
AP3S2-214ENST00000560940 SRCAPQ6ZRS2 3230 aa10.46□□□□□ -0.73
AP3S2-214ENST00000560940 RBM6P78332 1123 aaKnown RBP10.46□□□□□ -0.73
AP3S2-214ENST00000560940 KIF1BO60333 1816 aa10.46□□□□□ -0.74
AP3S2-214ENST00000560940 PNPLA6Q8IY17 1366 aa10.45□□□□□ -0.74
AP3S2-214ENST00000560940 KCNA4P22459 653 aa10.45□□□□□ -0.74
AP3S2-214ENST00000560940 RGS12O14924 1447 aa10.44□□□□□ -0.74
AP3S2-214ENST00000560940 METP08581 1390 aa10.44□□□□□ -0.74
AP3S2-214ENST00000560940 ZNF326Q5BKZ1 582 aaKnown RBP10.44□□□□□ -0.74
AP3S2-214ENST00000560940 NGLY1Q96IV0 654 aa10.44□□□□□ -0.74
AP3S2-214ENST00000560940 QTRT2Q9H974 415 aaKnown RBP10.44□□□□□ -0.74
AP3S2-214ENST00000560940 NEXMIFQ5QGS0 1516 aa10.43□□□□□ -0.74
AP3S2-214ENST00000560940 C8orf37Q96NL8 207 aa10.43□□□□□ -0.74
AP3S2-214ENST00000560940 CLTCL1P53675 1640 aa10.43□□□□□ -0.74
AP3S2-214ENST00000560940 EP400Q96L91 3159 aa10.41□□□□□ -0.74
AP3S2-214ENST00000560940 C1orf167Q5SNV9 1468 aa10.41□□□□□ -0.74
AP3S2-214ENST00000560940 PTCH1Q13635 1447 aa10.41□□□□□ -0.74
AP3S2-214ENST00000560940 ATAD2Q6PL18 1390 aa10.4□□□□□ -0.74
AP3S2-214ENST00000560940 COL22A1Q8NFW1 1626 aaPredicted RBP10.4□□□□□ -0.74
AP3S2-214ENST00000560940 DDX17Q92841 729 aaKnown RBP10.4□□□□□ -0.74
AP3S2-214ENST00000560940 PRAG1Q86YV5 1406 aa10.4□□□□□ -0.75
AP3S2-214ENST00000560940 SOS2Q07890 1332 aaPredicted RBP10.39□□□□□ -0.75
AP3S2-214ENST00000560940 MARF1Q9Y4F3 1742 aaKnown RBP10.39□□□□□ -0.75
AP3S2-214ENST00000560940 ADAMTS2O95450 1211 aa10.39□□□□□ -0.75
AP3S2-214ENST00000560940 ITGAEP38570 1179 aa10.39□□□□□ -0.75
AP3S2-214ENST00000560940 VGFO15240 615 aaPredicted RBP10.38□□□□□ -0.75
AP3S2-214ENST00000560940 USP21Q9UK80 565 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms