RNA–Protein interactions for RNA: ENST00000560913.1

PPP1R3E-206, Transcript of protein phosphatase 1 regulatory subunit 3E, humanhuman

TSL 2

Gene PPP1R3E, Length 932 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3E-206ENST00000560913 TMEM131LA2VDJ0 1609 aa26.36■■□□□ 1.81
PPP1R3E-206ENST00000560913 HSPA1LP34931 641 aa26.34■■□□□ 1.81
PPP1R3E-206ENST00000560913 ILDR2Q71H61 639 aa26.34■■□□□ 1.81
PPP1R3E-206ENST00000560913 SCAF1Q9H7N4 1312 aaKnown RBP26.33■■□□□ 1.81
PPP1R3E-206ENST00000560913 ZFYVE9O95405 1425 aa26.32■■□□□ 1.8
PPP1R3E-206ENST00000560913 ITGAEP38570 1179 aa26.32■■□□□ 1.8
PPP1R3E-206ENST00000560913 RRBP1Q9P2E9 1410 aaKnown RBP26.29■■□□□ 1.8
PPP1R3E-206ENST00000560913 SLC26A8Q96RN1 970 aa26.27■■□□□ 1.8
PPP1R3E-206ENST00000560913 NUP155O75694 1391 aa26.27■■□□□ 1.8
PPP1R3E-206ENST00000560913 NWD1Q149M9 1564 aa26.26■■□□□ 1.79
PPP1R3E-206ENST00000560913 RIMS2Q9UQ26 1411 aa26.25■■□□□ 1.79
PPP1R3E-206ENST00000560913 KCNA6P17658 529 aa26.25■■□□□ 1.79
PPP1R3E-206ENST00000560913 PLEKHG1Q9ULL1 1385 aa26.23■■□□□ 1.79
PPP1R3E-206ENST00000560913 CHD2O14647 1828 aaKnown RBP26.21■■□□□ 1.79
PPP1R3E-206ENST00000560913 TMEM94Q12767 1356 aa26.2■■□□□ 1.79
PPP1R3E-206ENST00000560913 MED1Q15648 1581 aaPredicted RBP26.2■■□□□ 1.78
PPP1R3E-206ENST00000560913 NKTRP30414 1462 aaKnown RBP26.19■■□□□ 1.78
PPP1R3E-206ENST00000560913 SPHKAPQ2M3C7 1700 aa26.19■■□□□ 1.78
PPP1R3E-206ENST00000560913 NAIPQ13075 1403 aa26.16■■□□□ 1.78
PPP1R3E-206ENST00000560913 HDGFP51858 240 aaKnown RBP26.16■■□□□ 1.78
PPP1R3E-206ENST00000560913 CHGAP10645 457 aaKnown RBP26.14■■□□□ 1.78
PPP1R3E-206ENST00000560913 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.14■■□□□ 1.78
PPP1R3E-206ENST00000560913 ADAMTS13Q76LX8 1427 aa26.14■■□□□ 1.77
PPP1R3E-206ENST00000560913 PPP1R15AO75807 674 aaPredicted RBP26.13■■□□□ 1.77
PPP1R3E-206ENST00000560913 PROSER2Q86WR7 435 aaPredicted RBP26.13■■□□□ 1.77
PPP1R3E-206ENST00000560913 BCANQ96GW7 911 aa26.13■■□□□ 1.77
PPP1R3E-206ENST00000560913 RBM33Q96EV2 1170 aaKnown RBP26.12■■□□□ 1.77
PPP1R3E-206ENST00000560913 TBX22Q9Y458 520 aa26.12■■□□□ 1.77
PPP1R3E-206ENST00000560913 SOCS7O14512 581 aa26.11■■□□□ 1.77
PPP1R3E-206ENST00000560913 FAM135BQ49AJ0 1406 aa26.11■■□□□ 1.77
PPP1R3E-206ENST00000560913 DIP2AQ14689 1571 aa26.1■■□□□ 1.77
PPP1R3E-206ENST00000560913 NUTM2DQ5VT03 806 aaPredicted RBP26.09■■□□□ 1.77
PPP1R3E-206ENST00000560913 CLTCL1P53675 1640 aa26.06■■□□□ 1.76
PPP1R3E-206ENST00000560913 ROBO1Q9Y6N7 1651 aa26.06■■□□□ 1.76
PPP1R3E-206ENST00000560913 HFM1A2PYH4 1435 aa26.05■■□□□ 1.76
PPP1R3E-206ENST00000560913 NRXN3Q9Y4C0 1643 aa26.05■■□□□ 1.76
PPP1R3E-206ENST00000560913 TRPM2O94759 1503 aa26.04■■□□□ 1.76
PPP1R3E-206ENST00000560913 PIK3R4Q99570 1358 aa26.04■■□□□ 1.76
PPP1R3E-206ENST00000560913 MSH6P52701 1360 aa26.02■■□□□ 1.76
PPP1R3E-206ENST00000560913 NCOA3Q9Y6Q9 1424 aa26.01■■□□□ 1.75
PPP1R3E-206ENST00000560913 SETBP1Q9Y6X0 1596 aa26.01■■□□□ 1.75
PPP1R3E-206ENST00000560913 PTPRUQ92729 1446 aa25.99■■□□□ 1.75
PPP1R3E-206ENST00000560913 KIF1BO60333 1816 aa25.98■■□□□ 1.75
PPP1R3E-206ENST00000560913 NEXMIFQ5QGS0 1516 aa25.98■■□□□ 1.75
PPP1R3E-206ENST00000560913 XRN1Q8IZH2 1706 aaKnown RBP25.96■■□□□ 1.75
PPP1R3E-206ENST00000560913 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.95■■□□□ 1.74
PPP1R3E-206ENST00000560913 SLAIN2Q9P270 581 aa25.95■■□□□ 1.74
PPP1R3E-206ENST00000560913 ZNF326Q5BKZ1 582 aaKnown RBP25.92■■□□□ 1.74
PPP1R3E-206ENST00000560913 AMOTL2Q9Y2J4 779 aa25.92■■□□□ 1.74
PPP1R3E-206ENST00000560913 TRIM52Q96A61 297 aa25.9■■□□□ 1.74
PPP1R3E-206ENST00000560913 PHLPP1O60346 1717 aa25.89■■□□□ 1.74
PPP1R3E-206ENST00000560913 METP08581 1390 aa25.88■■□□□ 1.73
PPP1R3E-206ENST00000560913 C19orf44Q9H6X5 657 aa25.87■■□□□ 1.73
PPP1R3E-206ENST00000560913 SLC4A1APQ9BWU0 796 aaKnown RBP25.86■■□□□ 1.73
PPP1R3E-206ENST00000560913 SETD1AO15047 1707 aaKnown RBP25.85■■□□□ 1.73
PPP1R3E-206ENST00000560913 RGS17Q9UGC6 210 aaPredicted RBP25.85■■□□□ 1.73
PPP1R3E-206ENST00000560913 COL16A1Q07092 1604 aaPredicted RBP25.85■■□□□ 1.73
PPP1R3E-206ENST00000560913 C14orf37Q86TY3 774 aa25.84■■□□□ 1.73
PPP1R3E-206ENST00000560913 CADPS2Q86UW7 1296 aa25.83■■□□□ 1.73
PPP1R3E-206ENST00000560913 PPLO60437 1756 aa25.82■■□□□ 1.72
PPP1R3E-206ENST00000560913 DCCP43146 1447 aa25.8■■□□□ 1.72
PPP1R3E-206ENST00000560913 AHDC1Q5TGY3 1603 aaPredicted RBP25.8■■□□□ 1.72
PPP1R3E-206ENST00000560913 ATF3P18847 181 aa25.79■■□□□ 1.72
PPP1R3E-206ENST00000560913 RPGRIP1LQ68CZ1 1315 aa25.77■■□□□ 1.72
PPP1R3E-206ENST00000560913 VGFO15240 615 aaPredicted RBP25.76■■□□□ 1.71
PPP1R3E-206ENST00000560913 MAPK8IP2Q13387 824 aaPredicted RBP25.76■■□□□ 1.71
PPP1R3E-206ENST00000560913 JCADQ9P266 1359 aa25.76■■□□□ 1.71
PPP1R3E-206ENST00000560913 NALCNQ8IZF0 1738 aa25.76■■□□□ 1.71
PPP1R3E-206ENST00000560913 MST1RQ04912 1400 aa25.73■■□□□ 1.71
PPP1R3E-206ENST00000560913 ADGRL3Q9HAR2 1447 aa25.73■■□□□ 1.71
PPP1R3E-206ENST00000560913 BRINP3Q76B58 766 aa25.73■■□□□ 1.71
PPP1R3E-206ENST00000560913 PRAG1Q86YV5 1406 aa25.72■■□□□ 1.71
PPP1R3E-206ENST00000560913 MPHOSPH9Q99550 1183 aa25.72■■□□□ 1.71
PPP1R3E-206ENST00000560913 IFT172Q9UG01 1749 aa25.71■■□□□ 1.71
PPP1R3E-206ENST00000560913 SHPRHQ149N8 1683 aa25.71■■□□□ 1.71
PPP1R3E-206ENST00000560913 ASXL1Q8IXJ9 1541 aa25.7■■□□□ 1.7
PPP1R3E-206ENST00000560913 PTCH1Q13635 1447 aa25.7■■□□□ 1.7
PPP1R3E-206ENST00000560913 SPATA31E1Q6ZUB1 1445 aa25.7■■□□□ 1.7
PPP1R3E-206ENST00000560913 NHSL1Q5SYE7 1610 aa25.69■■□□□ 1.7
PPP1R3E-206ENST00000560913 CCDC144AA2RUR9 1427 aa25.68■■□□□ 1.7
PPP1R3E-206ENST00000560913 ROBO2Q9HCK4 1378 aa25.67■■□□□ 1.7
PPP1R3E-206ENST00000560913 LRP6O75581 1613 aa25.66■■□□□ 1.7
PPP1R3E-206ENST00000560913 POTEAQ6S8J7 498 aa25.66■■□□□ 1.7
PPP1R3E-206ENST00000560913 SPATA31A6Q5VVP1 1343 aa25.63■■□□□ 1.69
PPP1R3E-206ENST00000560913 SETD5Q9C0A6 1442 aa25.63■■□□□ 1.69
PPP1R3E-206ENST00000560913 ADGRF5Q8IZF2 1346 aa25.63■■□□□ 1.69
PPP1R3E-206ENST00000560913 ACIN1Q9UKV3 1341 aaKnown RBP25.6■■□□□ 1.69
PPP1R3E-206ENST00000560913 LAMC1P11047 1609 aa25.59■■□□□ 1.69
PPP1R3E-206ENST00000560913 C1orf167Q5SNV9 1468 aa25.59■■□□□ 1.69
PPP1R3E-206ENST00000560913 ANKRD30BQ9BXX2 1392 aa25.58■■□□□ 1.69
PPP1R3E-206ENST00000560913 RGL3Q3MIN7 710 aa25.58■■□□□ 1.69
PPP1R3E-206ENST00000560913 PPP4R3CPQ6ZMV5 832 aa25.56■■□□□ 1.68
PPP1R3E-206ENST00000560913 RAB3GAP2Q9H2M9 1393 aa25.55■■□□□ 1.68
PPP1R3E-206ENST00000560913 PIK3C2GO75747 1445 aa25.54■■□□□ 1.68
PPP1R3E-206ENST00000560913 DDX17Q92841 729 aaKnown RBP25.54■■□□□ 1.68
PPP1R3E-206ENST00000560913 TECPR2O15040 1411 aa25.54■■□□□ 1.68
PPP1R3E-206ENST00000560913 KNDC1Q76NI1 1749 aa25.53■■□□□ 1.68
PPP1R3E-206ENST00000560913 CDC42BPGQ6DT37 1551 aa25.51■■□□□ 1.67
PPP1R3E-206ENST00000560913 LRPPRCP42704 1394 aaKnown RBP25.5■■□□□ 1.67
PPP1R3E-206ENST00000560913 LRRC59Q96AG4 307 aaKnown RBP25.5■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms