RNA–Protein interactions for RNA: ENST00000560542.1

IRF9-210, Transcript of interferon regulatory factor 9, humanhuman

TSL 2

Gene IRF9, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-210ENST00000560542 NCOA3Q9Y6Q9 1424 aa22.36■■□□□ 1.17
IRF9-210ENST00000560542 FGD6Q6ZV73 1430 aa22.35■■□□□ 1.17
IRF9-210ENST00000560542 PLEKHG1Q9ULL1 1385 aa22.35■■□□□ 1.17
IRF9-210ENST00000560542 ZFYVE9O95405 1425 aa22.34■■□□□ 1.17
IRF9-210ENST00000560542 RBM33Q96EV2 1170 aaKnown RBP22.33■■□□□ 1.17
IRF9-210ENST00000560542 CHD2O14647 1828 aaKnown RBP22.33■■□□□ 1.16
IRF9-210ENST00000560542 COL16A1Q07092 1604 aaPredicted RBP22.32■■□□□ 1.16
IRF9-210ENST00000560542 HDGFP51858 240 aaKnown RBP22.32■■□□□ 1.16
IRF9-210ENST00000560542 SPATA31A6Q5VVP1 1343 aa22.31■■□□□ 1.16
IRF9-210ENST00000560542 SETD1AO15047 1707 aaKnown RBP22.31■■□□□ 1.16
IRF9-210ENST00000560542 ADGRL2O95490 1459 aa22.31■■□□□ 1.16
IRF9-210ENST00000560542 BCANQ96GW7 911 aa22.31■■□□□ 1.16
IRF9-210ENST00000560542 APLP2Q06481 763 aa22.27■■□□□ 1.16
IRF9-210ENST00000560542 RIMS2Q9UQ26 1411 aa22.27■■□□□ 1.16
IRF9-210ENST00000560542 TBX22Q9Y458 520 aa22.27■■□□□ 1.16
IRF9-210ENST00000560542 DIP2AQ14689 1571 aa22.26■■□□□ 1.15
IRF9-210ENST00000560542 PPP1R15AO75807 674 aaPredicted RBP22.26■■□□□ 1.15
IRF9-210ENST00000560542 ZNF772Q68DY9 489 aaPredicted RBP22.26■■□□□ 1.15
IRF9-210ENST00000560542 AHDC1Q5TGY3 1603 aaPredicted RBP22.26■■□□□ 1.15
IRF9-210ENST00000560542 TMEM131LA2VDJ0 1609 aa22.25■■□□□ 1.15
IRF9-210ENST00000560542 CHIC2Q9UKJ5 165 aa22.25■■□□□ 1.15
IRF9-210ENST00000560542 PIK3R4Q99570 1358 aa22.25■■□□□ 1.15
IRF9-210ENST00000560542 GCC2Q8IWJ2 1684 aa22.24■■□□□ 1.15
IRF9-210ENST00000560542 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.24■■□□□ 1.15
IRF9-210ENST00000560542 LRP6O75581 1613 aa22.24■■□□□ 1.15
IRF9-210ENST00000560542 SHPRHQ149N8 1683 aa22.23■■□□□ 1.15
IRF9-210ENST00000560542 CADPS2Q86UW7 1296 aa22.23■■□□□ 1.15
IRF9-210ENST00000560542 ANKRD50Q9ULJ7 1429 aa22.23■■□□□ 1.15
IRF9-210ENST00000560542 MYO5BQ9ULV0 1848 aa22.22■■□□□ 1.15
IRF9-210ENST00000560542 C19orf44Q9H6X5 657 aa22.21■■□□□ 1.15
IRF9-210ENST00000560542 LOC105371045A0A1W2PR82 267 aa22.2■■□□□ 1.14
IRF9-210ENST00000560542 MEX3CQ5U5Q3 659 aaKnown RBP22.2■■□□□ 1.14
IRF9-210ENST00000560542 C14orf37Q86TY3 774 aa22.19■■□□□ 1.14
IRF9-210ENST00000560542 ADAMTS13Q76LX8 1427 aa22.19■■□□□ 1.14
IRF9-210ENST00000560542 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.19■■□□□ 1.14
IRF9-210ENST00000560542 CDK12Q9NYV4 1490 aaPredicted RBP22.18■■□□□ 1.14
IRF9-210ENST00000560542 ATF3P18847 181 aa22.18■■□□□ 1.14
IRF9-210ENST00000560542 UPF1Q92900 1129 aaKnown RBP eCLIP22.18■■□□□ 1.14
IRF9-210ENST00000560542 DCCP43146 1447 aa22.16■■□□□ 1.14
IRF9-210ENST00000560542 UNC13BO14795 1591 aa22.16■■□□□ 1.14
IRF9-210ENST00000560542 TRPM2O94759 1503 aa22.15■■□□□ 1.14
IRF9-210ENST00000560542 RXRBP28702 533 aa22.12■■□□□ 1.13
IRF9-210ENST00000560542 TRIM52Q96A61 297 aa22.11■■□□□ 1.13
IRF9-210ENST00000560542 BRINP3Q76B58 766 aa22.09■■□□□ 1.13
IRF9-210ENST00000560542 E9PCH4 1651 aa22.09■■□□□ 1.13
IRF9-210ENST00000560542 SETD5Q9C0A6 1442 aa22.08■■□□□ 1.13
IRF9-210ENST00000560542 CHGAP10645 457 aaKnown RBP22.08■■□□□ 1.13
IRF9-210ENST00000560542 ASXL1Q8IXJ9 1541 aa22.07■■□□□ 1.12
IRF9-210ENST00000560542 IQGAP3Q86VI3 1631 aa22.06■■□□□ 1.12
IRF9-210ENST00000560542 FAM50AQ14320 339 aaKnown RBP22.06■■□□□ 1.12
IRF9-210ENST00000560542 AMOTL2Q9Y2J4 779 aa22.06■■□□□ 1.12
IRF9-210ENST00000560542 XRN1Q8IZH2 1706 aaKnown RBP22.05■■□□□ 1.12
IRF9-210ENST00000560542 PTPRUQ92729 1446 aa22.05■■□□□ 1.12
IRF9-210ENST00000560542 NHSL1Q5SYE7 1610 aa22.04■■□□□ 1.12
IRF9-210ENST00000560542 ROCK1Q13464 1354 aa22.03■■□□□ 1.12
IRF9-210ENST00000560542 SETBP1Q9Y6X0 1596 aa22.03■■□□□ 1.12
IRF9-210ENST00000560542 NUTM2DQ5VT03 806 aaPredicted RBP22.02■■□□□ 1.12
IRF9-210ENST00000560542 MST1RQ04912 1400 aa22.02■■□□□ 1.12
IRF9-210ENST00000560542 AFF2P51816 1311 aa22.02■■□□□ 1.12
IRF9-210ENST00000560542 NUTM2BA6NNL0 878 aaPredicted RBP22.01■■□□□ 1.11
IRF9-210ENST00000560542 NUTM2EB1AL46 878 aaPredicted RBP22.01■■□□□ 1.11
IRF9-210ENST00000560542 NUTM2AQ8IVF1 878 aaPredicted RBP22.01■■□□□ 1.11
IRF9-210ENST00000560542 LRRC59Q96AG4 307 aaKnown RBP22.01■■□□□ 1.11
IRF9-210ENST00000560542 NRXN3Q9Y4C0 1643 aa21.99■■□□□ 1.11
IRF9-210ENST00000560542 ADGRL3Q9HAR2 1447 aa21.97■■□□□ 1.11
IRF9-210ENST00000560542 RBM6P78332 1123 aaKnown RBP21.96■■□□□ 1.11
IRF9-210ENST00000560542 RGS12O14924 1447 aa21.96■■□□□ 1.11
IRF9-210ENST00000560542 NUP155O75694 1391 aa21.95■■□□□ 1.1
IRF9-210ENST00000560542 PNPLA6Q8IY17 1366 aa21.95■■□□□ 1.1
IRF9-210ENST00000560542 C8orf37Q96NL8 207 aa21.92■■□□□ 1.1
IRF9-210ENST00000560542 QTRT2Q9H974 415 aaKnown RBP21.91■■□□□ 1.1
IRF9-210ENST00000560542 LAMC1P11047 1609 aa21.91■■□□□ 1.1
IRF9-210ENST00000560542 METP08581 1390 aa21.9■■□□□ 1.1
IRF9-210ENST00000560542 SPHKAPQ2M3C7 1700 aa21.9■■□□□ 1.1
IRF9-210ENST00000560542 NGLY1Q96IV0 654 aa21.9■■□□□ 1.1
IRF9-210ENST00000560542 NALCNQ8IZF0 1738 aa21.88■■□□□ 1.09
IRF9-210ENST00000560542 ATAD2Q6PL18 1390 aa21.87■■□□□ 1.09
IRF9-210ENST00000560542 FOXD1Q16676 465 aa21.85■■□□□ 1.09
IRF9-210ENST00000560542 ZNF326Q5BKZ1 582 aaKnown RBP21.85■■□□□ 1.09
IRF9-210ENST00000560542 PTCH1Q13635 1447 aa21.85■■□□□ 1.09
IRF9-210ENST00000560542 C1orf167Q5SNV9 1468 aa21.84■■□□□ 1.09
IRF9-210ENST00000560542 NEXMIFQ5QGS0 1516 aa21.84■■□□□ 1.09
IRF9-210ENST00000560542 PRAG1Q86YV5 1406 aa21.82■■□□□ 1.08
IRF9-210ENST00000560542 SOS2Q07890 1332 aaPredicted RBP21.81■■□□□ 1.08
IRF9-210ENST00000560542 DDX17Q92841 729 aaKnown RBP21.81■■□□□ 1.08
IRF9-210ENST00000560542 TRPC5Q9UL62 973 aaPredicted RBP21.8■■□□□ 1.08
IRF9-210ENST00000560542 SRCAPQ6ZRS2 3230 aa21.79■■□□□ 1.08
IRF9-210ENST00000560542 ADAMTS2O95450 1211 aa21.79■■□□□ 1.08
IRF9-210ENST00000560542 COL22A1Q8NFW1 1626 aaPredicted RBP21.78■■□□□ 1.08
IRF9-210ENST00000560542 FNBP4Q8N3X1 1017 aaPredicted RBP21.78■■□□□ 1.08
IRF9-210ENST00000560542 USP21Q9UK80 565 aa21.78■■□□□ 1.08
IRF9-210ENST00000560542 CLTCL1P53675 1640 aa21.77■■□□□ 1.08
IRF9-210ENST00000560542 ATRNO75882 1429 aa21.76■■□□□ 1.07
IRF9-210ENST00000560542 KIF1BO60333 1816 aa21.74■■□□□ 1.07
IRF9-210ENST00000560542 CCDC125Q86Z20 511 aa21.74■■□□□ 1.07
IRF9-210ENST00000560542 ROBO2Q9HCK4 1378 aa21.74■■□□□ 1.07
IRF9-210ENST00000560542 HFM1A2PYH4 1435 aa21.73■■□□□ 1.07
IRF9-210ENST00000560542 ZRANB1Q9UGI0 708 aa21.73■■□□□ 1.07
IRF9-210ENST00000560542 VGFO15240 615 aaPredicted RBP21.72■■□□□ 1.07
IRF9-210ENST00000560542 ORAI2Q96SN7 254 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms