RNA–Protein interactions for RNA: ENST00000560190.5

TCF12-215, Transcript of transcription factor 12, humanhuman

TSL 1 (best)

Gene TCF12, Length 1,183 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF12-215ENST00000560190 ZFYVE9O95405 1425 aa29.33■■■□□ 2.29
TCF12-215ENST00000560190 ROBO1Q9Y6N7 1651 aa29.32■■■□□ 2.28
TCF12-215ENST00000560190 KCNA6P17658 529 aa29.32■■■□□ 2.28
TCF12-215ENST00000560190 SLC52A1Q9NWF4 448 aa29.32■■■□□ 2.28
TCF12-215ENST00000560190 TMEM131LA2VDJ0 1609 aa29.31■■■□□ 2.28
TCF12-215ENST00000560190 FAM135BQ49AJ0 1406 aa29.31■■■□□ 2.28
TCF12-215ENST00000560190 RBM33Q96EV2 1170 aaKnown RBP29.29■■■□□ 2.28
TCF12-215ENST00000560190 E9PCH4 1651 aa29.28■■■□□ 2.28
TCF12-215ENST00000560190 RIMS2Q9UQ26 1411 aa29.26■■■□□ 2.27
TCF12-215ENST00000560190 PLEKHG1Q9ULL1 1385 aa29.26■■■□□ 2.27
TCF12-215ENST00000560190 CHD2O14647 1828 aaKnown RBP29.25■■■□□ 2.27
TCF12-215ENST00000560190 PROSER2Q86WR7 435 aaPredicted RBP29.25■■■□□ 2.27
TCF12-215ENST00000560190 IQGAP3Q86VI3 1631 aa29.24■■■□□ 2.27
TCF12-215ENST00000560190 BCANQ96GW7 911 aa29.21■■■□□ 2.27
TCF12-215ENST00000560190 RGS17Q9UGC6 210 aaPredicted RBP29.2■■■□□ 2.26
TCF12-215ENST00000560190 ROCK1Q13464 1354 aa29.19■■■□□ 2.26
TCF12-215ENST00000560190 MSH6P52701 1360 aa29.18■■■□□ 2.26
TCF12-215ENST00000560190 PPP1R15AO75807 674 aaPredicted RBP29.17■■■□□ 2.26
TCF12-215ENST00000560190 PHLPP1O60346 1717 aa29.14■■■□□ 2.25
TCF12-215ENST00000560190 DIP2AQ14689 1571 aa29.13■■■□□ 2.25
TCF12-215ENST00000560190 ADAMTS13Q76LX8 1427 aa29.13■■■□□ 2.25
TCF12-215ENST00000560190 CHGAP10645 457 aaKnown RBP29.11■■■□□ 2.25
TCF12-215ENST00000560190 NUTM2DQ5VT03 806 aaPredicted RBP29.09■■■□□ 2.25
TCF12-215ENST00000560190 HDGFP51858 240 aaKnown RBP29.07■■■□□ 2.24
TCF12-215ENST00000560190 COL16A1Q07092 1604 aaPredicted RBP29.07■■■□□ 2.24
TCF12-215ENST00000560190 TBX22Q9Y458 520 aa29.07■■■□□ 2.24
TCF12-215ENST00000560190 NUP155O75694 1391 aa29.06■■■□□ 2.24
TCF12-215ENST00000560190 SLAIN2Q9P270 581 aa29.06■■■□□ 2.24
TCF12-215ENST00000560190 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.05■■■□□ 2.24
TCF12-215ENST00000560190 SPHKAPQ2M3C7 1700 aa29.04■■■□□ 2.24
TCF12-215ENST00000560190 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.04■■■□□ 2.24
TCF12-215ENST00000560190 ITGAEP38570 1179 aa29.03■■■□□ 2.24
TCF12-215ENST00000560190 TRPM2O94759 1503 aa29.03■■■□□ 2.24
TCF12-215ENST00000560190 NCOA3Q9Y6Q9 1424 aa29.03■■■□□ 2.24
TCF12-215ENST00000560190 NRXN3Q9Y4C0 1643 aa29.02■■■□□ 2.24
TCF12-215ENST00000560190 POTEAQ6S8J7 498 aa29.01■■■□□ 2.23
TCF12-215ENST00000560190 PIK3R4Q99570 1358 aa29.01■■■□□ 2.23
TCF12-215ENST00000560190 JCADQ9P266 1359 aa28.99■■■□□ 2.23
TCF12-215ENST00000560190 PTPRUQ92729 1446 aa28.98■■■□□ 2.23
TCF12-215ENST00000560190 XRN1Q8IZH2 1706 aaKnown RBP28.97■■■□□ 2.23
TCF12-215ENST00000560190 AHDC1Q5TGY3 1603 aaPredicted RBP28.96■■■□□ 2.23
TCF12-215ENST00000560190 C14orf37Q86TY3 774 aa28.96■■■□□ 2.23
TCF12-215ENST00000560190 SETBP1Q9Y6X0 1596 aa28.96■■■□□ 2.23
TCF12-215ENST00000560190 SETD1AO15047 1707 aaKnown RBP28.94■■■□□ 2.22
TCF12-215ENST00000560190 LRP6O75581 1613 aa28.94■■■□□ 2.22
TCF12-215ENST00000560190 CLTCL1P53675 1640 aa28.91■■■□□ 2.22
TCF12-215ENST00000560190 SHPRHQ149N8 1683 aa28.9■■■□□ 2.22
TCF12-215ENST00000560190 RRBP1Q9P2E9 1410 aaKnown RBP28.9■■■□□ 2.22
TCF12-215ENST00000560190 CADPS2Q86UW7 1296 aa28.89■■■□□ 2.22
TCF12-215ENST00000560190 C19orf44Q9H6X5 657 aa28.89■■■□□ 2.22
TCF12-215ENST00000560190 AMOTL2Q9Y2J4 779 aa28.89■■■□□ 2.22
TCF12-215ENST00000560190 ATF3P18847 181 aa28.87■■■□□ 2.21
TCF12-215ENST00000560190 NEXMIFQ5QGS0 1516 aa28.86■■■□□ 2.21
TCF12-215ENST00000560190 DCCP43146 1447 aa28.86■■■□□ 2.21
TCF12-215ENST00000560190 ASXL1Q8IXJ9 1541 aa28.83■■■□□ 2.21
TCF12-215ENST00000560190 SPATA31A6Q5VVP1 1343 aa28.82■■■□□ 2.2
TCF12-215ENST00000560190 METP08581 1390 aa28.82■■■□□ 2.2
TCF12-215ENST00000560190 BRINP3Q76B58 766 aa28.81■■■□□ 2.2
TCF12-215ENST00000560190 ZNF326Q5BKZ1 582 aaKnown RBP28.8■■■□□ 2.2
TCF12-215ENST00000560190 NALCNQ8IZF0 1738 aa28.8■■■□□ 2.2
TCF12-215ENST00000560190 NHSL1Q5SYE7 1610 aa28.8■■■□□ 2.2
TCF12-215ENST00000560190 MST1RQ04912 1400 aa28.79■■■□□ 2.2
TCF12-215ENST00000560190 NAIPQ13075 1403 aa28.79■■■□□ 2.2
TCF12-215ENST00000560190 KIF1BO60333 1816 aa28.79■■■□□ 2.2
TCF12-215ENST00000560190 ADGRL3Q9HAR2 1447 aa28.75■■■□□ 2.19
TCF12-215ENST00000560190 MEX3CQ5U5Q3 659 aaKnown RBP28.74■■■□□ 2.19
TCF12-215ENST00000560190 SETD5Q9C0A6 1442 aa28.69■■■□□ 2.18
TCF12-215ENST00000560190 ZNF772Q68DY9 489 aaPredicted RBP28.66■■■□□ 2.18
TCF12-215ENST00000560190 HFM1A2PYH4 1435 aa28.66■■■□□ 2.18
TCF12-215ENST00000560190 PTCH1Q13635 1447 aa28.65■■■□□ 2.18
TCF12-215ENST00000560190 NUTM2BA6NNL0 878 aaPredicted RBP28.63■■■□□ 2.17
TCF12-215ENST00000560190 NUTM2EB1AL46 878 aaPredicted RBP28.63■■■□□ 2.17
TCF12-215ENST00000560190 NUTM2AQ8IVF1 878 aaPredicted RBP28.63■■■□□ 2.17
TCF12-215ENST00000560190 PPLO60437 1756 aa28.62■■■□□ 2.17
TCF12-215ENST00000560190 DDX17Q92841 729 aaKnown RBP28.62■■■□□ 2.17
TCF12-215ENST00000560190 TRIM52Q96A61 297 aa28.61■■■□□ 2.17
TCF12-215ENST00000560190 ROBO2Q9HCK4 1378 aa28.6■■■□□ 2.17
TCF12-215ENST00000560190 PRAG1Q86YV5 1406 aa28.6■■■□□ 2.17
TCF12-215ENST00000560190 C1orf167Q5SNV9 1468 aa28.59■■■□□ 2.17
TCF12-215ENST00000560190 LAMC1P11047 1609 aa28.59■■■□□ 2.17
TCF12-215ENST00000560190 PNPLA6Q8IY17 1366 aa28.59■■■□□ 2.17
TCF12-215ENST00000560190 AFF2P51816 1311 aa28.55■■■□□ 2.16
TCF12-215ENST00000560190 CDK12Q9NYV4 1490 aaPredicted RBP28.54■■■□□ 2.16
TCF12-215ENST00000560190 LRRC59Q96AG4 307 aaKnown RBP28.54■■■□□ 2.16
TCF12-215ENST00000560190 VGFO15240 615 aaPredicted RBP28.52■■■□□ 2.16
TCF12-215ENST00000560190 SLC4A1APQ9BWU0 796 aaKnown RBP28.52■■■□□ 2.16
TCF12-215ENST00000560190 RXRBP28702 533 aa28.51■■■□□ 2.15
TCF12-215ENST00000560190 UPF1Q92900 1129 aaKnown RBP eCLIP28.5■■■□□ 2.15
TCF12-215ENST00000560190 RPGRIP1LQ68CZ1 1315 aa28.48■■■□□ 2.15
TCF12-215ENST00000560190 TRIM26Q12899 539 aaPredicted RBP28.48■■■□□ 2.15
TCF12-215ENST00000560190 C8orf37Q96NL8 207 aa28.48■■■□□ 2.15
TCF12-215ENST00000560190 CDC42BPGQ6DT37 1551 aa28.47■■■□□ 2.15
TCF12-215ENST00000560190 RGS12O14924 1447 aa28.47■■■□□ 2.15
TCF12-215ENST00000560190 FOXD1Q16676 465 aa28.46■■■□□ 2.15
TCF12-215ENST00000560190 ORAI2Q96SN7 254 aa28.46■■■□□ 2.15
TCF12-215ENST00000560190 IFT172Q9UG01 1749 aa28.46■■■□□ 2.15
TCF12-215ENST00000560190 SOS2Q07890 1332 aaPredicted RBP28.43■■■□□ 2.14
TCF12-215ENST00000560190 COL22A1Q8NFW1 1626 aaPredicted RBP28.41■■■□□ 2.14
TCF12-215ENST00000560190 CCDC144AA2RUR9 1427 aa28.4■■■□□ 2.14
TCF12-215ENST00000560190 SPATA31E1Q6ZUB1 1445 aa28.4■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms