RNA–Protein interactions for RNA: ENST00000559463.5

RPL28-208, Transcript of ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL28, Length 852 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-208ENST00000559463 CHGAP10645 457 aaKnown RBP22.26■■□□□ 1.15
RPL28-208ENST00000559463 CHD2O14647 1828 aaKnown RBP22.25■■□□□ 1.15
RPL28-208ENST00000559463 TRIM52Q96A61 297 aa22.25■■□□□ 1.15
RPL28-208ENST00000559463 NWD1Q149M9 1564 aa22.25■■□□□ 1.15
RPL28-208ENST00000559463 ALKQ9UM73 1620 aa22.24■■□□□ 1.15
RPL28-208ENST00000559463 PLEKHG1Q9ULL1 1385 aa22.24■■□□□ 1.15
RPL28-208ENST00000559463 UBAP1LF5GYI3 381 aa22.2■■□□□ 1.14
RPL28-208ENST00000559463 SLC26A8Q96RN1 970 aa22.2■■□□□ 1.14
RPL28-208ENST00000559463 NRXN3Q9Y4C0 1643 aa22.2■■□□□ 1.14
RPL28-208ENST00000559463 SLC4A1APQ9BWU0 796 aaKnown RBP22.19■■□□□ 1.14
RPL28-208ENST00000559463 DIP2AQ14689 1571 aa22.19■■□□□ 1.14
RPL28-208ENST00000559463 NEXMIFQ5QGS0 1516 aa22.18■■□□□ 1.14
RPL28-208ENST00000559463 PPP1R15AO75807 674 aaPredicted RBP22.18■■□□□ 1.14
RPL28-208ENST00000559463 NUTM2DQ5VT03 806 aaPredicted RBP22.18■■□□□ 1.14
RPL28-208ENST00000559463 SENP3Q9H4L4 574 aaPredicted RBP22.18■■□□□ 1.14
RPL28-208ENST00000559463 SETD5Q9C0A6 1442 aa22.17■■□□□ 1.14
RPL28-208ENST00000559463 ADAMTS13Q76LX8 1427 aa22.16■■□□□ 1.14
RPL28-208ENST00000559463 HDGFP51858 240 aaKnown RBP22.16■■□□□ 1.14
RPL28-208ENST00000559463 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.16■■□□□ 1.14
RPL28-208ENST00000559463 SETBP1Q9Y6X0 1596 aa22.15■■□□□ 1.14
RPL28-208ENST00000559463 NKTRP30414 1462 aaKnown RBP22.15■■□□□ 1.14
RPL28-208ENST00000559463 PPLO60437 1756 aa22.15■■□□□ 1.14
RPL28-208ENST00000559463 BCANQ96GW7 911 aa22.14■■□□□ 1.13
RPL28-208ENST00000559463 KCNA6P17658 529 aa22.13■■□□□ 1.13
RPL28-208ENST00000559463 FOXD1Q16676 465 aa22.12■■□□□ 1.13
RPL28-208ENST00000559463 RAB3GAP2Q9H2M9 1393 aa22.12■■□□□ 1.13
RPL28-208ENST00000559463 TOM1O60784 492 aa22.1■■□□□ 1.13
RPL28-208ENST00000559463 MPHOSPH9Q99550 1183 aa22.1■■□□□ 1.13
RPL28-208ENST00000559463 SETD1AO15047 1707 aaKnown RBP22.09■■□□□ 1.13
RPL28-208ENST00000559463 ZNF326Q5BKZ1 582 aaKnown RBP22.09■■□□□ 1.13
RPL28-208ENST00000559463 TBX22Q9Y458 520 aa22.09■■□□□ 1.13
RPL28-208ENST00000559463 TMEM94Q12767 1356 aa22.09■■□□□ 1.13
RPL28-208ENST00000559463 IFT172Q9UG01 1749 aa22.09■■□□□ 1.13
RPL28-208ENST00000559463 XRN1Q8IZH2 1706 aaKnown RBP22.08■■□□□ 1.12
RPL28-208ENST00000559463 PIP4K2BP78356 416 aa22.06■■□□□ 1.12
RPL28-208ENST00000559463 SCAF1Q9H7N4 1312 aaKnown RBP22.05■■□□□ 1.12
RPL28-208ENST00000559463 PIK3R4Q99570 1358 aa22.04■■□□□ 1.12
RPL28-208ENST00000559463 CCDC144AA2RUR9 1427 aa22.04■■□□□ 1.12
RPL28-208ENST00000559463 PTPRUQ92729 1446 aa22.04■■□□□ 1.12
RPL28-208ENST00000559463 ACIN1Q9UKV3 1341 aaKnown RBP22.04■■□□□ 1.12
RPL28-208ENST00000559463 PROSER2Q86WR7 435 aaPredicted RBP22.03■■□□□ 1.12
RPL28-208ENST00000559463 RBM33Q96EV2 1170 aaKnown RBP22.03■■□□□ 1.12
RPL28-208ENST00000559463 SPATA31E1Q6ZUB1 1445 aa22.01■■□□□ 1.11
RPL28-208ENST00000559463 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.99■■□□□ 1.11
RPL28-208ENST00000559463 HSPA1LP34931 641 aa21.98■■□□□ 1.11
RPL28-208ENST00000559463 METP08581 1390 aa21.98■■□□□ 1.11
RPL28-208ENST00000559463 ROBO1Q9Y6N7 1651 aa21.98■■□□□ 1.11
RPL28-208ENST00000559463 RPGRIP1LQ68CZ1 1315 aa21.97■■□□□ 1.11
RPL28-208ENST00000559463 AMOTL2Q9Y2J4 779 aa21.95■■□□□ 1.1
RPL28-208ENST00000559463 MSH6P52701 1360 aa21.94■■□□□ 1.1
RPL28-208ENST00000559463 NCOA3Q9Y6Q9 1424 aa21.94■■□□□ 1.1
RPL28-208ENST00000559463 VGFO15240 615 aaPredicted RBP21.93■■□□□ 1.1
RPL28-208ENST00000559463 NALCNQ8IZF0 1738 aa21.92■■□□□ 1.1
RPL28-208ENST00000559463 HRCP23327 699 aa21.91■■□□□ 1.1
RPL28-208ENST00000559463 RGL3Q3MIN7 710 aa21.9■■□□□ 1.1
RPL28-208ENST00000559463 FAM135BQ49AJ0 1406 aa21.89■■□□□ 1.1
RPL28-208ENST00000559463 ANKRD30BQ9BXX2 1392 aa21.88■■□□□ 1.09
RPL28-208ENST00000559463 ADGRF5Q8IZF2 1346 aa21.87■■□□□ 1.09
RPL28-208ENST00000559463 ASXL1Q8IXJ9 1541 aa21.85■■□□□ 1.09
RPL28-208ENST00000559463 PIK3C2GO75747 1445 aa21.85■■□□□ 1.09
RPL28-208ENST00000559463 PTCH1Q13635 1447 aa21.85■■□□□ 1.09
RPL28-208ENST00000559463 PRAG1Q86YV5 1406 aa21.85■■□□□ 1.09
RPL28-208ENST00000559463 MED1Q15648 1581 aaPredicted RBP21.85■■□□□ 1.09
RPL28-208ENST00000559463 PHLPP1O60346 1717 aa21.85■■□□□ 1.09
RPL28-208ENST00000559463 KNDC1Q76NI1 1749 aa21.84■■□□□ 1.09
RPL28-208ENST00000559463 C14orf37Q86TY3 774 aa21.84■■□□□ 1.09
RPL28-208ENST00000559463 MYOM2P54296 1465 aa21.83■■□□□ 1.08
RPL28-208ENST00000559463 NRXN1Q9ULB1 1477 aa21.83■■□□□ 1.08
RPL28-208ENST00000559463 DCCP43146 1447 aa21.82■■□□□ 1.08
RPL28-208ENST00000559463 LAMC1P11047 1609 aa21.82■■□□□ 1.08
RPL28-208ENST00000559463 C19orf44Q9H6X5 657 aa21.82■■□□□ 1.08
RPL28-208ENST00000559463 SLAIN2Q9P270 581 aa21.82■■□□□ 1.08
RPL28-208ENST00000559463 DISP3Q9P2K9 1392 aa21.82■■□□□ 1.08
RPL28-208ENST00000559463 ADGRL3Q9HAR2 1447 aa21.81■■□□□ 1.08
RPL28-208ENST00000559463 ROBO2Q9HCK4 1378 aa21.81■■□□□ 1.08
RPL28-208ENST00000559463 COL16A1Q07092 1604 aaPredicted RBP21.78■■□□□ 1.08
RPL28-208ENST00000559463 CADPS2Q86UW7 1296 aa21.78■■□□□ 1.08
RPL28-208ENST00000559463 ATF3P18847 181 aa21.77■■□□□ 1.08
RPL28-208ENST00000559463 MST1RQ04912 1400 aa21.76■■□□□ 1.07
RPL28-208ENST00000559463 AHDC1Q5TGY3 1603 aaPredicted RBP21.76■■□□□ 1.07
RPL28-208ENST00000559463 TECPR2O15040 1411 aa21.74■■□□□ 1.07
RPL28-208ENST00000559463 NHSL1Q5SYE7 1610 aa21.74■■□□□ 1.07
RPL28-208ENST00000559463 LRPPRCP42704 1394 aaKnown RBP21.72■■□□□ 1.07
RPL28-208ENST00000559463 YTHDC2Q9H6S0 1430 aaKnown RBP21.71■■□□□ 1.07
RPL28-208ENST00000559463 TMEM132EQ6IEE7 984 aa21.7■■□□□ 1.06
RPL28-208ENST00000559463 CDC42BPGQ6DT37 1551 aa21.7■■□□□ 1.06
RPL28-208ENST00000559463 C14orf93Q9H972 538 aaKnown RBP21.69■■□□□ 1.06
RPL28-208ENST00000559463 ABCC11Q96J66 1382 aa21.69■■□□□ 1.06
RPL28-208ENST00000559463 BRINP3Q76B58 766 aa21.68■■□□□ 1.06
RPL28-208ENST00000559463 ADGRB1O14514 1584 aa21.68■■□□□ 1.06
RPL28-208ENST00000559463 SHPRHQ149N8 1683 aa21.68■■□□□ 1.06
RPL28-208ENST00000559463 DHX57Q6P158 1386 aaKnown RBP21.67■■□□□ 1.06
RPL28-208ENST00000559463 CFAP70Q5T0N1 1121 aa21.67■■□□□ 1.06
RPL28-208ENST00000559463 STK26Q9P289 416 aa21.67■■□□□ 1.06
RPL28-208ENST00000559463 C1orf167Q5SNV9 1468 aa21.65■■□□□ 1.06
RPL28-208ENST00000559463 PLEKHH1Q9ULM0 1364 aa21.65■■□□□ 1.06
RPL28-208ENST00000559463 ILDR2Q71H61 639 aa21.65■■□□□ 1.06
RPL28-208ENST00000559463 FMN2Q9NZ56 1722 aa21.65■■□□□ 1.06
RPL28-208ENST00000559463 RGPD8O14715 1765 aaPredicted RBP21.64■■□□□ 1.05
RPL28-208ENST00000559463 WAPLQ7Z5K2 1190 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms