RNA–Protein interactions for RNA: ENST00000559361.5

PSEN1-224, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 795 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-224ENST00000559361 MSH6P52701 1360 aa25.66■■□□□ 1.7
PSEN1-224ENST00000559361 CHD2O14647 1828 aaKnown RBP25.65■■□□□ 1.7
PSEN1-224ENST00000559361 CHIC2Q9UKJ5 165 aa25.64■■□□□ 1.7
PSEN1-224ENST00000559361 PHLPP1O60346 1717 aa25.63■■□□□ 1.69
PSEN1-224ENST00000559361 JCADQ9P266 1359 aa25.63■■□□□ 1.69
PSEN1-224ENST00000559361 ZFYVE9O95405 1425 aa25.63■■□□□ 1.69
PSEN1-224ENST00000559361 PPARGC1BQ86YN6 1023 aaKnown RBP25.61■■□□□ 1.69
PSEN1-224ENST00000559361 RPRD2Q5VT52 1461 aaKnown RBP25.6■■□□□ 1.69
PSEN1-224ENST00000559361 PLEKHG1Q9ULL1 1385 aa25.6■■□□□ 1.69
PSEN1-224ENST00000559361 MYO5BQ9ULV0 1848 aa25.6■■□□□ 1.69
PSEN1-224ENST00000559361 ADGRL2O95490 1459 aa25.59■■□□□ 1.69
PSEN1-224ENST00000559361 NCOA3Q9Y6Q9 1424 aa25.58■■□□□ 1.69
PSEN1-224ENST00000559361 BCANQ96GW7 911 aa25.57■■□□□ 1.68
PSEN1-224ENST00000559361 SETD1AO15047 1707 aaKnown RBP25.57■■□□□ 1.68
PSEN1-224ENST00000559361 COL16A1Q07092 1604 aaPredicted RBP25.56■■□□□ 1.68
PSEN1-224ENST00000559361 TBX22Q9Y458 520 aa25.56■■□□□ 1.68
PSEN1-224ENST00000559361 RIMS2Q9UQ26 1411 aa25.54■■□□□ 1.68
PSEN1-224ENST00000559361 HDGFP51858 240 aaKnown RBP25.54■■□□□ 1.68
PSEN1-224ENST00000559361 TMEM131LA2VDJ0 1609 aa25.54■■□□□ 1.68
PSEN1-224ENST00000559361 RRBP1Q9P2E9 1410 aaKnown RBP25.52■■□□□ 1.68
PSEN1-224ENST00000559361 GCC2Q8IWJ2 1684 aa25.52■■□□□ 1.68
PSEN1-224ENST00000559361 LRP6O75581 1613 aa25.5■■□□□ 1.67
PSEN1-224ENST00000559361 SPATA31A6Q5VVP1 1343 aa25.5■■□□□ 1.67
PSEN1-224ENST00000559361 ANKRD50Q9ULJ7 1429 aa25.5■■□□□ 1.67
PSEN1-224ENST00000559361 ADAMTS13Q76LX8 1427 aa25.48■■□□□ 1.67
PSEN1-224ENST00000559361 PPP1R15AO75807 674 aaPredicted RBP25.48■■□□□ 1.67
PSEN1-224ENST00000559361 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.47■■□□□ 1.67
PSEN1-224ENST00000559361 AHDC1Q5TGY3 1603 aaPredicted RBP25.47■■□□□ 1.67
PSEN1-224ENST00000559361 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.46■■□□□ 1.67
PSEN1-224ENST00000559361 C19orf44Q9H6X5 657 aa25.46■■□□□ 1.67
PSEN1-224ENST00000559361 PIK3R4Q99570 1358 aa25.45■■□□□ 1.67
PSEN1-224ENST00000559361 CADPS2Q86UW7 1296 aa25.45■■□□□ 1.66
PSEN1-224ENST00000559361 ZNF772Q68DY9 489 aaPredicted RBP25.44■■□□□ 1.66
PSEN1-224ENST00000559361 SHPRHQ149N8 1683 aa25.44■■□□□ 1.66
PSEN1-224ENST00000559361 UPF1Q92900 1129 aaKnown RBP eCLIP25.43■■□□□ 1.66
PSEN1-224ENST00000559361 DIP2AQ14689 1571 aa25.43■■□□□ 1.66
PSEN1-224ENST00000559361 ATF3P18847 181 aa25.39■■□□□ 1.66
PSEN1-224ENST00000559361 FAM50AQ14320 339 aaKnown RBP25.39■■□□□ 1.66
PSEN1-224ENST00000559361 C14orf37Q86TY3 774 aa25.39■■□□□ 1.66
PSEN1-224ENST00000559361 UNC13BO14795 1591 aa25.39■■□□□ 1.65
PSEN1-224ENST00000559361 MEX3CQ5U5Q3 659 aaKnown RBP25.38■■□□□ 1.65
PSEN1-224ENST00000559361 E9PCH4 1651 aa25.38■■□□□ 1.65
PSEN1-224ENST00000559361 CHGAP10645 457 aaKnown RBP25.36■■□□□ 1.65
PSEN1-224ENST00000559361 NUTM2DQ5VT03 806 aaPredicted RBP25.36■■□□□ 1.65
PSEN1-224ENST00000559361 BRINP3Q76B58 766 aa25.36■■□□□ 1.65
PSEN1-224ENST00000559361 PTPRUQ92729 1446 aa25.35■■□□□ 1.65
PSEN1-224ENST00000559361 TRIM52Q96A61 297 aa25.34■■□□□ 1.65
PSEN1-224ENST00000559361 AMOTL2Q9Y2J4 779 aa25.34■■□□□ 1.65
PSEN1-224ENST00000559361 TRPM2O94759 1503 aa25.32■■□□□ 1.64
PSEN1-224ENST00000559361 DCCP43146 1447 aa25.32■■□□□ 1.64
PSEN1-224ENST00000559361 RXRBP28702 533 aa25.32■■□□□ 1.64
PSEN1-224ENST00000559361 CDK12Q9NYV4 1490 aaPredicted RBP25.32■■□□□ 1.64
PSEN1-224ENST00000559361 IQGAP3Q86VI3 1631 aa25.3■■□□□ 1.64
PSEN1-224ENST00000559361 SETD5Q9C0A6 1442 aa25.29■■□□□ 1.64
PSEN1-224ENST00000559361 XRN1Q8IZH2 1706 aaKnown RBP25.26■■□□□ 1.63
PSEN1-224ENST00000559361 ROCK1Q13464 1354 aa25.26■■□□□ 1.63
PSEN1-224ENST00000559361 ASXL1Q8IXJ9 1541 aa25.26■■□□□ 1.63
PSEN1-224ENST00000559361 NRXN3Q9Y4C0 1643 aa25.26■■□□□ 1.63
PSEN1-224ENST00000559361 MST1RQ04912 1400 aa25.25■■□□□ 1.63
PSEN1-224ENST00000559361 NHSL1Q5SYE7 1610 aa25.24■■□□□ 1.63
PSEN1-224ENST00000559361 NUTM2BA6NNL0 878 aaPredicted RBP25.24■■□□□ 1.63
PSEN1-224ENST00000559361 NUTM2EB1AL46 878 aaPredicted RBP25.24■■□□□ 1.63
PSEN1-224ENST00000559361 NUTM2AQ8IVF1 878 aaPredicted RBP25.24■■□□□ 1.63
PSEN1-224ENST00000559361 SETBP1Q9Y6X0 1596 aa25.23■■□□□ 1.63
PSEN1-224ENST00000559361 AFF2P51816 1311 aa25.23■■□□□ 1.63
PSEN1-224ENST00000559361 LRRC59Q96AG4 307 aaKnown RBP25.21■■□□□ 1.63
PSEN1-224ENST00000559361 NUP155O75694 1391 aa25.2■■□□□ 1.63
PSEN1-224ENST00000559361 TRIM26Q12899 539 aaPredicted RBP25.19■■□□□ 1.62
PSEN1-224ENST00000559361 METP08581 1390 aa25.18■■□□□ 1.62
PSEN1-224ENST00000559361 SRCAPQ6ZRS2 3230 aa25.15■■□□□ 1.62
PSEN1-224ENST00000559361 QTRT2Q9H974 415 aaKnown RBP25.15■■□□□ 1.62
PSEN1-224ENST00000559361 PNPLA6Q8IY17 1366 aa25.15■■□□□ 1.62
PSEN1-224ENST00000559361 ADGRL3Q9HAR2 1447 aa25.14■■□□□ 1.62
PSEN1-224ENST00000559361 ITGAEP38570 1179 aa25.14■■□□□ 1.62
PSEN1-224ENST00000559361 RBM6P78332 1123 aaKnown RBP25.14■■□□□ 1.62
PSEN1-224ENST00000559361 RGS12O14924 1447 aa25.13■■□□□ 1.61
PSEN1-224ENST00000559361 DDX17Q92841 729 aaKnown RBP25.13■■□□□ 1.61
PSEN1-224ENST00000559361 SPHKAPQ2M3C7 1700 aa25.12■■□□□ 1.61
PSEN1-224ENST00000559361 C8orf37Q96NL8 207 aa25.12■■□□□ 1.61
PSEN1-224ENST00000559361 NALCNQ8IZF0 1738 aa25.09■■□□□ 1.61
PSEN1-224ENST00000559361 LAMC1P11047 1609 aa25.08■■□□□ 1.61
PSEN1-224ENST00000559361 ZNF326Q5BKZ1 582 aaKnown RBP25.07■■□□□ 1.6
PSEN1-224ENST00000559361 NEXMIFQ5QGS0 1516 aa25.07■■□□□ 1.6
PSEN1-224ENST00000559361 HFM1A2PYH4 1435 aa25.06■■□□□ 1.6
PSEN1-224ENST00000559361 C1orf167Q5SNV9 1468 aa25.06■■□□□ 1.6
PSEN1-224ENST00000559361 NGLY1Q96IV0 654 aa25.03■■□□□ 1.6
PSEN1-224ENST00000559361 SOS2Q07890 1332 aaPredicted RBP25.03■■□□□ 1.6
PSEN1-224ENST00000559361 CLTCL1P53675 1640 aa25.01■■□□□ 1.59
PSEN1-224ENST00000559361 ADAMTS2O95450 1211 aa25■■□□□ 1.59
PSEN1-224ENST00000559361 ACIN1Q9UKV3 1341 aaKnown RBP25■■□□□ 1.59
PSEN1-224ENST00000559361 PTCH1Q13635 1447 aa25■■□□□ 1.59
PSEN1-224ENST00000559361 NAIPQ13075 1403 aa24.99■■□□□ 1.59
PSEN1-224ENST00000559361 FNBP4Q8N3X1 1017 aaPredicted RBP24.99■■□□□ 1.59
PSEN1-224ENST00000559361 ORAI2Q96SN7 254 aa24.98■■□□□ 1.59
PSEN1-224ENST00000559361 PRAG1Q86YV5 1406 aa24.97■■□□□ 1.59
PSEN1-224ENST00000559361 ATAD2Q6PL18 1390 aa24.96■■□□□ 1.59
PSEN1-224ENST00000559361 KIF1BO60333 1816 aa24.96■■□□□ 1.59
PSEN1-224ENST00000559361 USP21Q9UK80 565 aa24.96■■□□□ 1.59
PSEN1-224ENST00000559361 ROBO2Q9HCK4 1378 aa24.95■■□□□ 1.59
PSEN1-224ENST00000559361 TRPC5Q9UL62 973 aaPredicted RBP24.95■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms