RNA–Protein interactions for RNA: ENST00000558961.1

BMP4-204, Transcript of bone morphogenetic protein 4, humanhuman

TSL 3

Gene BMP4, Length 495 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4-204ENST00000558961 ALKQ9UM73 1620 aa16.96■□□□□ 0.31
BMP4-204ENST00000558961 PLEKHG1Q9ULL1 1385 aa16.96■□□□□ 0.31
BMP4-204ENST00000558961 DIP2AQ14689 1571 aa16.95■□□□□ 0.3
BMP4-204ENST00000558961 KIF1BO60333 1816 aa16.94■□□□□ 0.3
BMP4-204ENST00000558961 CHD2O14647 1828 aaKnown RBP16.93■□□□□ 0.3
BMP4-204ENST00000558961 NKTRP30414 1462 aaKnown RBP16.93■□□□□ 0.3
BMP4-204ENST00000558961 NRXN3Q9Y4C0 1643 aa16.91■□□□□ 0.3
BMP4-204ENST00000558961 NEXMIFQ5QGS0 1516 aa16.9■□□□□ 0.3
BMP4-204ENST00000558961 SETBP1Q9Y6X0 1596 aa16.89■□□□□ 0.3
BMP4-204ENST00000558961 HDGFP51858 240 aaKnown RBP16.89■□□□□ 0.29
BMP4-204ENST00000558961 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.89■□□□□ 0.29
BMP4-204ENST00000558961 ADAMTS13Q76LX8 1427 aa16.88■□□□□ 0.29
BMP4-204ENST00000558961 UBAP1LF5GYI3 381 aa16.88■□□□□ 0.29
BMP4-204ENST00000558961 SLC26A8Q96RN1 970 aa16.86■□□□□ 0.29
BMP4-204ENST00000558961 ACIN1Q9UKV3 1341 aaKnown RBP16.86■□□□□ 0.29
BMP4-204ENST00000558961 CHGAP10645 457 aaKnown RBP16.85■□□□□ 0.29
BMP4-204ENST00000558961 KCNA6P17658 529 aa16.85■□□□□ 0.29
BMP4-204ENST00000558961 TRIM52Q96A61 297 aa16.85■□□□□ 0.29
BMP4-204ENST00000558961 SLC4A1APQ9BWU0 796 aaKnown RBP16.85■□□□□ 0.29
BMP4-204ENST00000558961 SETD5Q9C0A6 1442 aa16.85■□□□□ 0.29
BMP4-204ENST00000558961 TOM1O60784 492 aa16.84■□□□□ 0.29
BMP4-204ENST00000558961 PPP1R15AO75807 674 aaPredicted RBP16.84■□□□□ 0.29
BMP4-204ENST00000558961 PIK3R4Q99570 1358 aa16.84■□□□□ 0.29
BMP4-204ENST00000558961 PPLO60437 1756 aa16.84■□□□□ 0.29
BMP4-204ENST00000558961 XRN1Q8IZH2 1706 aaKnown RBP16.83■□□□□ 0.28
BMP4-204ENST00000558961 TBX22Q9Y458 520 aa16.83■□□□□ 0.28
BMP4-204ENST00000558961 SETD1AO15047 1707 aaKnown RBP16.82■□□□□ 0.28
BMP4-204ENST00000558961 TMEM94Q12767 1356 aa16.81■□□□□ 0.28
BMP4-204ENST00000558961 IFT172Q9UG01 1749 aa16.81■□□□□ 0.28
BMP4-204ENST00000558961 NCOA3Q9Y6Q9 1424 aa16.79■□□□□ 0.28
BMP4-204ENST00000558961 RAB3GAP2Q9H2M9 1393 aa16.78■□□□□ 0.28
BMP4-204ENST00000558961 NUTM2DQ5VT03 806 aaPredicted RBP16.77■□□□□ 0.28
BMP4-204ENST00000558961 BCANQ96GW7 911 aa16.77■□□□□ 0.28
BMP4-204ENST00000558961 MPHOSPH9Q99550 1183 aa16.77■□□□□ 0.28
BMP4-204ENST00000558961 CCDC144AA2RUR9 1427 aa16.77■□□□□ 0.27
BMP4-204ENST00000558961 PTPRUQ92729 1446 aa16.77■□□□□ 0.27
BMP4-204ENST00000558961 SPATA31E1Q6ZUB1 1445 aa16.76■□□□□ 0.27
BMP4-204ENST00000558961 ZNF326Q5BKZ1 582 aaKnown RBP16.75■□□□□ 0.27
BMP4-204ENST00000558961 RPGRIP1LQ68CZ1 1315 aa16.74■□□□□ 0.27
BMP4-204ENST00000558961 PRAG1Q86YV5 1406 aa16.74■□□□□ 0.27
BMP4-204ENST00000558961 PIP4K2BP78356 416 aa16.74■□□□□ 0.27
BMP4-204ENST00000558961 FOXD1Q16676 465 aa16.74■□□□□ 0.27
BMP4-204ENST00000558961 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.73■□□□□ 0.27
BMP4-204ENST00000558961 PROSER2Q86WR7 435 aaPredicted RBP16.73■□□□□ 0.27
BMP4-204ENST00000558961 ROBO1Q9Y6N7 1651 aa16.72■□□□□ 0.27
BMP4-204ENST00000558961 FAM135BQ49AJ0 1406 aa16.72■□□□□ 0.27
BMP4-204ENST00000558961 SENP3Q9H4L4 574 aaPredicted RBP16.72■□□□□ 0.27
BMP4-204ENST00000558961 MSH6P52701 1360 aa16.72■□□□□ 0.27
BMP4-204ENST00000558961 HRCP23327 699 aa16.71■□□□□ 0.27
BMP4-204ENST00000558961 METP08581 1390 aa16.71■□□□□ 0.27
BMP4-204ENST00000558961 SCAF1Q9H7N4 1312 aaKnown RBP16.7■□□□□ 0.26
BMP4-204ENST00000558961 HSPA1LP34931 641 aa16.7■□□□□ 0.26
BMP4-204ENST00000558961 VGFO15240 615 aaPredicted RBP16.69■□□□□ 0.26
BMP4-204ENST00000558961 DCCP43146 1447 aa16.69■□□□□ 0.26
BMP4-204ENST00000558961 NALCNQ8IZF0 1738 aa16.68■□□□□ 0.26
BMP4-204ENST00000558961 RBM33Q96EV2 1170 aaKnown RBP16.68■□□□□ 0.26
BMP4-204ENST00000558961 AMOTL2Q9Y2J4 779 aa16.68■□□□□ 0.26
BMP4-204ENST00000558961 PTCH1Q13635 1447 aa16.68■□□□□ 0.26
BMP4-204ENST00000558961 ANKRD30BQ9BXX2 1392 aa16.67■□□□□ 0.26
BMP4-204ENST00000558961 MED1Q15648 1581 aaPredicted RBP16.66■□□□□ 0.26
BMP4-204ENST00000558961 KNDC1Q76NI1 1749 aa16.65■□□□□ 0.26
BMP4-204ENST00000558961 PIK3C2GO75747 1445 aa16.65■□□□□ 0.26
BMP4-204ENST00000558961 LAMC1P11047 1609 aa16.65■□□□□ 0.26
BMP4-204ENST00000558961 MYOM2P54296 1465 aa16.65■□□□□ 0.26
BMP4-204ENST00000558961 NRXN1Q9ULB1 1477 aa16.65■□□□□ 0.26
BMP4-204ENST00000558961 ASXL1Q8IXJ9 1541 aa16.64■□□□□ 0.25
BMP4-204ENST00000558961 ADGRL3Q9HAR2 1447 aa16.63■□□□□ 0.25
BMP4-204ENST00000558961 C19orf44Q9H6X5 657 aa16.63■□□□□ 0.25
BMP4-204ENST00000558961 PHLPP1O60346 1717 aa16.62■□□□□ 0.25
BMP4-204ENST00000558961 COL16A1Q07092 1604 aaPredicted RBP16.61■□□□□ 0.25
BMP4-204ENST00000558961 AHDC1Q5TGY3 1603 aaPredicted RBP16.61■□□□□ 0.25
BMP4-204ENST00000558961 ADGRF5Q8IZF2 1346 aa16.61■□□□□ 0.25
BMP4-204ENST00000558961 DISP3Q9P2K9 1392 aa16.61■□□□□ 0.25
BMP4-204ENST00000558961 TECPR2O15040 1411 aa16.61■□□□□ 0.25
BMP4-204ENST00000558961 CADPS2Q86UW7 1296 aa16.6■□□□□ 0.25
BMP4-204ENST00000558961 SLAIN2Q9P270 581 aa16.6■□□□□ 0.25
BMP4-204ENST00000558961 RGL3Q3MIN7 710 aa16.58■□□□□ 0.24
BMP4-204ENST00000558961 ROBO2Q9HCK4 1378 aa16.58■□□□□ 0.24
BMP4-204ENST00000558961 MST1RQ04912 1400 aa16.58■□□□□ 0.24
BMP4-204ENST00000558961 NHSL1Q5SYE7 1610 aa16.58■□□□□ 0.24
BMP4-204ENST00000558961 C14orf37Q86TY3 774 aa16.57■□□□□ 0.24
BMP4-204ENST00000558961 CDC42BPGQ6DT37 1551 aa16.56■□□□□ 0.24
BMP4-204ENST00000558961 ATF3P18847 181 aa16.55■□□□□ 0.24
BMP4-204ENST00000558961 LRPPRCP42704 1394 aaKnown RBP16.54■□□□□ 0.24
BMP4-204ENST00000558961 SHPRHQ149N8 1683 aa16.53■□□□□ 0.24
BMP4-204ENST00000558961 ABCC11Q96J66 1382 aa16.52■□□□□ 0.24
BMP4-204ENST00000558961 TRIM26Q12899 539 aaPredicted RBP16.52■□□□□ 0.24
BMP4-204ENST00000558961 ADGRB1O14514 1584 aa16.51■□□□□ 0.23
BMP4-204ENST00000558961 BRINP3Q76B58 766 aa16.51■□□□□ 0.23
BMP4-204ENST00000558961 YTHDC2Q9H6S0 1430 aaKnown RBP16.51■□□□□ 0.23
BMP4-204ENST00000558961 C14orf93Q9H972 538 aaKnown RBP16.5■□□□□ 0.23
BMP4-204ENST00000558961 DLC1Q96QB1 1528 aa16.5■□□□□ 0.23
BMP4-204ENST00000558961 C1orf167Q5SNV9 1468 aa16.49■□□□□ 0.23
BMP4-204ENST00000558961 FMN2Q9NZ56 1722 aa16.48■□□□□ 0.23
BMP4-204ENST00000558961 STAC3Q96MF2 364 aa16.48■□□□□ 0.23
BMP4-204ENST00000558961 DHX57Q6P158 1386 aaKnown RBP16.48■□□□□ 0.23
BMP4-204ENST00000558961 JCADQ9P266 1359 aa16.48■□□□□ 0.23
BMP4-204ENST00000558961 ILDR2Q71H61 639 aa16.47■□□□□ 0.23
BMP4-204ENST00000558961 KIAA1210Q9ULL0 1709 aa16.47■□□□□ 0.23
BMP4-204ENST00000558961 TMEM132EQ6IEE7 984 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms