RNA–Protein interactions for RNA: ENST00000558604.1

ACAN-204, Transcript of aggrecan, humanhuman

TSL 2

Gene ACAN, Length 749 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACAN-204ENST00000558604 SPHKAPQ2M3C7 1700 aa22.45■■□□□ 1.19
ACAN-204ENST00000558604 RIMS2Q9UQ26 1411 aa22.44■■□□□ 1.18
ACAN-204ENST00000558604 NAIPQ13075 1403 aa22.43■■□□□ 1.18
ACAN-204ENST00000558604 ZFYVE9O95405 1425 aa22.42■■□□□ 1.18
ACAN-204ENST00000558604 HDGFP51858 240 aaKnown RBP22.42■■□□□ 1.18
ACAN-204ENST00000558604 SLC26A8Q96RN1 970 aa22.42■■□□□ 1.18
ACAN-204ENST00000558604 DISP3Q9P2K9 1392 aa22.41■■□□□ 1.18
ACAN-204ENST00000558604 XIRP1Q702N8 1843 aaKnown RBP22.39■■□□□ 1.17
ACAN-204ENST00000558604 HFM1A2PYH4 1435 aa22.39■■□□□ 1.17
ACAN-204ENST00000558604 PLEKHG1Q9ULL1 1385 aa22.38■■□□□ 1.17
ACAN-204ENST00000558604 NWD1Q149M9 1564 aa22.38■■□□□ 1.17
ACAN-204ENST00000558604 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.37■■□□□ 1.17
ACAN-204ENST00000558604 ALKQ9UM73 1620 aa22.37■■□□□ 1.17
ACAN-204ENST00000558604 NKTRP30414 1462 aaKnown RBP22.36■■□□□ 1.17
ACAN-204ENST00000558604 KCNA6P17658 529 aa22.34■■□□□ 1.17
ACAN-204ENST00000558604 TRIM52Q96A61 297 aa22.34■■□□□ 1.17
ACAN-204ENST00000558604 TRPM2O94759 1503 aa22.33■■□□□ 1.17
ACAN-204ENST00000558604 HSPA1LP34931 641 aa22.33■■□□□ 1.17
ACAN-204ENST00000558604 NUTM2DQ5VT03 806 aaPredicted RBP22.33■■□□□ 1.17
ACAN-204ENST00000558604 DIP2AQ14689 1571 aa22.33■■□□□ 1.16
ACAN-204ENST00000558604 TMEM94Q12767 1356 aa22.32■■□□□ 1.16
ACAN-204ENST00000558604 CLTCL1P53675 1640 aa22.31■■□□□ 1.16
ACAN-204ENST00000558604 PROSER2Q86WR7 435 aaPredicted RBP22.31■■□□□ 1.16
ACAN-204ENST00000558604 CHD2O14647 1828 aaKnown RBP22.3■■□□□ 1.16
ACAN-204ENST00000558604 KIF1BO60333 1816 aa22.29■■□□□ 1.16
ACAN-204ENST00000558604 ZNF326Q5BKZ1 582 aaKnown RBP22.29■■□□□ 1.16
ACAN-204ENST00000558604 RBM33Q96EV2 1170 aaKnown RBP22.26■■□□□ 1.15
ACAN-204ENST00000558604 ADAMTS13Q76LX8 1427 aa22.25■■□□□ 1.15
ACAN-204ENST00000558604 TBX22Q9Y458 520 aa22.25■■□□□ 1.15
ACAN-204ENST00000558604 MSH6P52701 1360 aa22.25■■□□□ 1.15
ACAN-204ENST00000558604 SLC4A1APQ9BWU0 796 aaKnown RBP22.24■■□□□ 1.15
ACAN-204ENST00000558604 MED1Q15648 1581 aaPredicted RBP22.22■■□□□ 1.15
ACAN-204ENST00000558604 SETBP1Q9Y6X0 1596 aa22.21■■□□□ 1.15
ACAN-204ENST00000558604 NEXMIFQ5QGS0 1516 aa22.21■■□□□ 1.15
ACAN-204ENST00000558604 NRXN3Q9Y4C0 1643 aa22.2■■□□□ 1.15
ACAN-204ENST00000558604 C14orf37Q86TY3 774 aa22.2■■□□□ 1.14
ACAN-204ENST00000558604 PIK3R4Q99570 1358 aa22.2■■□□□ 1.14
ACAN-204ENST00000558604 ROBO1Q9Y6N7 1651 aa22.2■■□□□ 1.14
ACAN-204ENST00000558604 FAM135BQ49AJ0 1406 aa22.15■■□□□ 1.14
ACAN-204ENST00000558604 XRN1Q8IZH2 1706 aaKnown RBP22.14■■□□□ 1.13
ACAN-204ENST00000558604 ILDR2Q71H61 639 aa22.13■■□□□ 1.13
ACAN-204ENST00000558604 NCOA3Q9Y6Q9 1424 aa22.13■■□□□ 1.13
ACAN-204ENST00000558604 AMOTL2Q9Y2J4 779 aa22.12■■□□□ 1.13
ACAN-204ENST00000558604 FOXD1Q16676 465 aa22.11■■□□□ 1.13
ACAN-204ENST00000558604 CCDC144AA2RUR9 1427 aa22.11■■□□□ 1.13
ACAN-204ENST00000558604 PTPRUQ92729 1446 aa22.11■■□□□ 1.13
ACAN-204ENST00000558604 PPLO60437 1756 aa22.1■■□□□ 1.13
ACAN-204ENST00000558604 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.1■■□□□ 1.13
ACAN-204ENST00000558604 SETD5Q9C0A6 1442 aa22.08■■□□□ 1.13
ACAN-204ENST00000558604 SLAIN2Q9P270 581 aa22.08■■□□□ 1.13
ACAN-204ENST00000558604 METP08581 1390 aa22.08■■□□□ 1.12
ACAN-204ENST00000558604 PHLPP1O60346 1717 aa22.08■■□□□ 1.12
ACAN-204ENST00000558604 ATF3P18847 181 aa22.07■■□□□ 1.12
ACAN-204ENST00000558604 ACIN1Q9UKV3 1341 aaKnown RBP22.06■■□□□ 1.12
ACAN-204ENST00000558604 VGFO15240 615 aaPredicted RBP22.06■■□□□ 1.12
ACAN-204ENST00000558604 MPHOSPH9Q99550 1183 aa22.06■■□□□ 1.12
ACAN-204ENST00000558604 RPGRIP1LQ68CZ1 1315 aa22.06■■□□□ 1.12
ACAN-204ENST00000558604 CADPS2Q86UW7 1296 aa22.05■■□□□ 1.12
ACAN-204ENST00000558604 C19orf44Q9H6X5 657 aa22.05■■□□□ 1.12
ACAN-204ENST00000558604 SETD1AO15047 1707 aaKnown RBP22.03■■□□□ 1.12
ACAN-204ENST00000558604 DCCP43146 1447 aa22.01■■□□□ 1.11
ACAN-204ENST00000558604 RAB3GAP2Q9H2M9 1393 aa22■■□□□ 1.11
ACAN-204ENST00000558604 NALCNQ8IZF0 1738 aa22■■□□□ 1.11
ACAN-204ENST00000558604 IFT172Q9UG01 1749 aa22■■□□□ 1.11
ACAN-204ENST00000558604 SOCS7O14512 581 aa21.98■■□□□ 1.11
ACAN-204ENST00000558604 ADGRL3Q9HAR2 1447 aa21.97■■□□□ 1.11
ACAN-204ENST00000558604 RGL3Q3MIN7 710 aa21.97■■□□□ 1.11
ACAN-204ENST00000558604 COL16A1Q07092 1604 aaPredicted RBP21.97■■□□□ 1.11
ACAN-204ENST00000558604 PTCH1Q13635 1447 aa21.97■■□□□ 1.11
ACAN-204ENST00000558604 SPATA31E1Q6ZUB1 1445 aa21.97■■□□□ 1.11
ACAN-204ENST00000558604 AHDC1Q5TGY3 1603 aaPredicted RBP21.95■■□□□ 1.1
ACAN-204ENST00000558604 ANKRD30BQ9BXX2 1392 aa21.94■■□□□ 1.1
ACAN-204ENST00000558604 ASXL1Q8IXJ9 1541 aa21.93■■□□□ 1.1
ACAN-204ENST00000558604 JCADQ9P266 1359 aa21.93■■□□□ 1.1
ACAN-204ENST00000558604 MST1RQ04912 1400 aa21.92■■□□□ 1.1
ACAN-204ENST00000558604 ADGRF5Q8IZF2 1346 aa21.91■■□□□ 1.1
ACAN-204ENST00000558604 ROBO2Q9HCK4 1378 aa21.9■■□□□ 1.1
ACAN-204ENST00000558604 PRAG1Q86YV5 1406 aa21.89■■□□□ 1.1
ACAN-204ENST00000558604 BRINP3Q76B58 766 aa21.89■■□□□ 1.09
ACAN-204ENST00000558604 SHPRHQ149N8 1683 aa21.88■■□□□ 1.09
ACAN-204ENST00000558604 NHSL1Q5SYE7 1610 aa21.88■■□□□ 1.09
ACAN-204ENST00000558604 PIK3C2GO75747 1445 aa21.87■■□□□ 1.09
ACAN-204ENST00000558604 LAMC1P11047 1609 aa21.85■■□□□ 1.09
ACAN-204ENST00000558604 KNDC1Q76NI1 1749 aa21.85■■□□□ 1.09
ACAN-204ENST00000558604 MYOM2P54296 1465 aa21.83■■□□□ 1.09
ACAN-204ENST00000558604 STK26Q9P289 416 aa21.83■■□□□ 1.09
ACAN-204ENST00000558604 SPATA31A6Q5VVP1 1343 aa21.82■■□□□ 1.08
ACAN-204ENST00000558604 MEX3CQ5U5Q3 659 aaKnown RBP21.82■■□□□ 1.08
ACAN-204ENST00000558604 C1orf167Q5SNV9 1468 aa21.82■■□□□ 1.08
ACAN-204ENST00000558604 CDC42BPGQ6DT37 1551 aa21.82■■□□□ 1.08
ACAN-204ENST00000558604 LRPPRCP42704 1394 aaKnown RBP21.8■■□□□ 1.08
ACAN-204ENST00000558604 TECPR2O15040 1411 aa21.8■■□□□ 1.08
ACAN-204ENST00000558604 LRP6O75581 1613 aa21.79■■□□□ 1.08
ACAN-204ENST00000558604 TMEM132EQ6IEE7 984 aa21.78■■□□□ 1.08
ACAN-204ENST00000558604 RGS17Q9UGC6 210 aaPredicted RBP21.78■■□□□ 1.08
ACAN-204ENST00000558604 NRXN1Q9ULB1 1477 aa21.77■■□□□ 1.08
ACAN-204ENST00000558604 YTHDC2Q9H6S0 1430 aaKnown RBP21.77■■□□□ 1.08
ACAN-204ENST00000558604 HRCP23327 699 aa21.75■■□□□ 1.07
ACAN-204ENST00000558604 DDX17Q92841 729 aaKnown RBP21.75■■□□□ 1.07
ACAN-204ENST00000558604 ABCC11Q96J66 1382 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms