RNA–Protein interactions for RNA: ENST00000558583.2

SHISA9-203, Transcript of shisa family member 9, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SHISA9, Length 6,724 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA9-203ENST00000558583 BECN2A8MW95 431 aa19.34■□□□□ 0.69
SHISA9-203ENST00000558583 SYNE3Q6ZMZ3 975 aa19.33■□□□□ 0.69
SHISA9-203ENST00000558583 DHX37Q8IY37 1157 aaKnown RBP19.33■□□□□ 0.68
SHISA9-203ENST00000558583 ARHGAP35Q9NRY4 1499 aa19.33■□□□□ 0.68
SHISA9-203ENST00000558583 CEP164Q9UPV0 1460 aa19.33■□□□□ 0.68
SHISA9-203ENST00000558583 CRBNQ96SW2 442 aa19.33■□□□□ 0.68
SHISA9-203ENST00000558583 AIMP1Q12904 312 aaKnown RBP19.32■□□□□ 0.68
SHISA9-203ENST00000558583 C9orf78Q9NZ63 289 aaPredicted RBP19.32■□□□□ 0.68
SHISA9-203ENST00000558583 PDE4AP27815 886 aa19.32■□□□□ 0.68
SHISA9-203ENST00000558583 SKIDA1Q1XH10 827 aa19.32■□□□□ 0.68
SHISA9-203ENST00000558583 SOGA1O94964 1423 aa19.31■□□□□ 0.68
SHISA9-203ENST00000558583 DDX11L8A8MPP1 907 aa19.31■□□□□ 0.68
SHISA9-203ENST00000558583 TSR1Q2NL82 804 aaKnown RBP19.3■□□□□ 0.68
SHISA9-203ENST00000558583 PAXIP1Q6ZW49 1069 aaPredicted RBP19.3■□□□□ 0.68
SHISA9-203ENST00000558583 CHMP4AQ9BY43 222 aa19.29■□□□□ 0.68
SHISA9-203ENST00000558583 HDAC5Q9UQL6 1122 aa19.29■□□□□ 0.68
SHISA9-203ENST00000558583 OSCARQ8IYS5 282 aa19.29■□□□□ 0.68
SHISA9-203ENST00000558583 FHAD1B1AJZ9 1412 aa19.29■□□□□ 0.68
SHISA9-203ENST00000558583 NEXNQ0ZGT2 675 aa19.29■□□□□ 0.68
SHISA9-203ENST00000558583 HOMER1Q86YM7 354 aa19.28■□□□□ 0.68
SHISA9-203ENST00000558583 RBM42Q9BTD8 480 aaKnown RBP19.28■□□□□ 0.68
SHISA9-203ENST00000558583 NFXL1Q6ZNB6 911 aa19.28■□□□□ 0.68
SHISA9-203ENST00000558583 NLRP2Q9NX02 1062 aa19.28■□□□□ 0.68
SHISA9-203ENST00000558583 PDS5BQ9NTI5 1447 aa19.28■□□□□ 0.68
SHISA9-203ENST00000558583 KANK4Q5T7N3 995 aaPredicted RBP19.27■□□□□ 0.68
SHISA9-203ENST00000558583 PAF1Q8N7H5 531 aa19.27■□□□□ 0.68
SHISA9-203ENST00000558583 LMOD3Q0VAK6 560 aa19.27■□□□□ 0.68
SHISA9-203ENST00000558583 MPHOSPH9Q99550 1183 aa19.26■□□□□ 0.67
SHISA9-203ENST00000558583 COG6Q9Y2V7 657 aa19.26■□□□□ 0.67
SHISA9-203ENST00000558583 SETD5Q9C0A6 1442 aa19.26■□□□□ 0.67
SHISA9-203ENST00000558583 ANKRD30AQ9BXX3 1397 aa19.25■□□□□ 0.67
SHISA9-203ENST00000558583 RALBP1Q15311 655 aa19.25■□□□□ 0.67
SHISA9-203ENST00000558583 TPM2P07951 284 aa19.24■□□□□ 0.67
SHISA9-203ENST00000558583 CALRP27797 417 aaKnown RBP19.24■□□□□ 0.67
SHISA9-203ENST00000558583 TTLL5Q6EMB2 1281 aa19.24■□□□□ 0.67
SHISA9-203ENST00000558583 ANO2Q9NQ90 1003 aa19.24■□□□□ 0.67
SHISA9-203ENST00000558583 SMARCA2P51531 1590 aa19.23■□□□□ 0.67
SHISA9-203ENST00000558583 FAM161AQ3B820 660 aa19.22■□□□□ 0.67
SHISA9-203ENST00000558583 NAP1L1P55209 391 aaKnown RBP19.22■□□□□ 0.67
SHISA9-203ENST00000558583 STK11IPQ8N1F8 1099 aa19.22■□□□□ 0.67
SHISA9-203ENST00000558583 TNIKQ9UKE5 1360 aa19.21■□□□□ 0.67
SHISA9-203ENST00000558583 R3HCC1Q9Y3T6 440 aaKnown RBP19.21■□□□□ 0.67
SHISA9-203ENST00000558583 TRIM29Q14134 588 aa19.21■□□□□ 0.67
SHISA9-203ENST00000558583 RBM5P52756 815 aaKnown RBP eCLIP19.21■□□□□ 0.67
SHISA9-203ENST00000558583 RAPGEF4Q8WZA2 1011 aa19.21■□□□□ 0.67
SHISA9-203ENST00000558583 ATP2B2Q01814 1243 aa19.2■□□□□ 0.66
SHISA9-203ENST00000558583 BICD2Q8TD16 824 aa19.2■□□□□ 0.66
SHISA9-203ENST00000558583 ESCO1Q5FWF5 840 aa19.2■□□□□ 0.66
SHISA9-203ENST00000558583 NEUROD6Q96NK8 337 aa19.19■□□□□ 0.66
SHISA9-203ENST00000558583 ERICH2A1L162 156 aa19.19■□□□□ 0.66
SHISA9-203ENST00000558583 TPM1P09493 284 aa19.18■□□□□ 0.66
SHISA9-203ENST00000558583 GPS2Q13227 327 aa19.18■□□□□ 0.66
SHISA9-203ENST00000558583 RIC3Q7Z5B4 369 aa19.18■□□□□ 0.66
SHISA9-203ENST00000558583 IFT57Q9NWB7 429 aa19.18■□□□□ 0.66
SHISA9-203ENST00000558583 MYCNP04198 464 aaPredicted RBP19.18■□□□□ 0.66
SHISA9-203ENST00000558583 CCDC70Q6NSX1 233 aa19.18■□□□□ 0.66
SHISA9-203ENST00000558583 RBM10P98175 930 aaKnown RBP19.18■□□□□ 0.66
SHISA9-203ENST00000558583 RAB3GAP2Q9H2M9 1393 aa19.17■□□□□ 0.66
SHISA9-203ENST00000558583 VPS37CA5D8V6 355 aaPredicted RBP19.17■□□□□ 0.66
SHISA9-203ENST00000558583 ZFYVE27Q5T4F4 411 aa19.17■□□□□ 0.66
SHISA9-203ENST00000558583 IFIT2P09913 472 aaKnown RBP19.16■□□□□ 0.66
SHISA9-203ENST00000558583 WWC2Q6AWC2 1192 aa19.16■□□□□ 0.66
SHISA9-203ENST00000558583 DIAPH3Q9NSV4 1193 aa19.16■□□□□ 0.66
SHISA9-203ENST00000558583 MAPK8IP2Q13387 824 aaPredicted RBP19.16■□□□□ 0.66
SHISA9-203ENST00000558583 JPH4Q96JJ6 628 aa19.16■□□□□ 0.66
SHISA9-203ENST00000558583 NACADO15069 1562 aa19.16■□□□□ 0.66
SHISA9-203ENST00000558583 CHMP4BP1P59074 171 aa19.15■□□□□ 0.66
SHISA9-203ENST00000558583 RNF214Q8ND24 703 aa19.15■□□□□ 0.66
SHISA9-203ENST00000558583 PLCD4Q9BRC7 762 aa19.15■□□□□ 0.66
SHISA9-203ENST00000558583 RRP12Q5JTH9 1297 aaKnown RBP19.14■□□□□ 0.66
SHISA9-203ENST00000558583 PPM1FP49593 454 aaPredicted RBP19.14■□□□□ 0.65
SHISA9-203ENST00000558583 TEX35Q5T0J7 233 aa19.14■□□□□ 0.65
SHISA9-203ENST00000558583 CENPQQ7L2Z9 268 aaPredicted RBP19.14■□□□□ 0.65
SHISA9-203ENST00000558583 MPNDQ8N594 471 aa19.14■□□□□ 0.65
SHISA9-203ENST00000558583 HMOX1P09601 288 aa19.14■□□□□ 0.65
SHISA9-203ENST00000558583 PDILTQ8N807 584 aa19.13■□□□□ 0.65
SHISA9-203ENST00000558583 PANK3Q9H999 370 aa19.13■□□□□ 0.65
SHISA9-203ENST00000558583 DDX54Q8TDD1 881 aaKnown RBP19.13■□□□□ 0.65
SHISA9-203ENST00000558583 WASHC4Q2M389 1173 aa19.13■□□□□ 0.65
SHISA9-203ENST00000558583 RRP1P56182 461 aaKnown RBP19.13■□□□□ 0.65
SHISA9-203ENST00000558583 PROSER2Q86WR7 435 aaPredicted RBP19.13■□□□□ 0.65
SHISA9-203ENST00000558583 ODF2Q5BJF6 829 aa19.12■□□□□ 0.65
SHISA9-203ENST00000558583 L3MBTL2Q969R5 705 aa19.12■□□□□ 0.65
SHISA9-203ENST00000558583 CT47A1Q5JQC4 288 aaPredicted RBP19.12■□□□□ 0.65
SHISA9-203ENST00000558583 EVC2Q86UK5 1308 aa19.11■□□□□ 0.65
SHISA9-203ENST00000558583 DDX58O95786 925 aaKnown RBP19.11■□□□□ 0.65
SHISA9-203ENST00000558583 PRDM2Q13029 1718 aa19.11■□□□□ 0.65
SHISA9-203ENST00000558583 TRDNQ13061 729 aa19.11■□□□□ 0.65
SHISA9-203ENST00000558583 KIF3AQ9Y496 699 aa19.11■□□□□ 0.65
SHISA9-203ENST00000558583 CPLX1O14810 134 aa19.1■□□□□ 0.65
SHISA9-203ENST00000558583 KIF6Q6ZMV9 814 aa19.1■□□□□ 0.65
SHISA9-203ENST00000558583 FAM43AQ8N2R8 423 aa19.1■□□□□ 0.65
SHISA9-203ENST00000558583 SKOR2Q2VWA4 1001 aaPredicted RBP19.1■□□□□ 0.65
SHISA9-203ENST00000558583 G3BP1Q13283 466 aaKnown RBP eCLIP19.1■□□□□ 0.65
SHISA9-203ENST00000558583 RUFY1Q96T51 708 aa19.1■□□□□ 0.65
SHISA9-203ENST00000558583 WDR70Q9NW82 654 aa19.1■□□□□ 0.65
SHISA9-203ENST00000558583 BICDL1Q6ZP65 573 aa19.09■□□□□ 0.65
SHISA9-203ENST00000558583 CHMP4CQ96CF2 233 aa19.09■□□□□ 0.65
SHISA9-203ENST00000558583 MAP7D2Q96T17 732 aa19.09■□□□□ 0.65
SHISA9-203ENST00000558583 VGFO15240 615 aaPredicted RBP19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms