RNA–Protein interactions for RNA: ENST00000557344.5

APEX1-218, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 2

Gene APEX1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-218ENST00000557344 LRP6O75581 1613 aa15.87■□□□□ 0.13
APEX1-218ENST00000557344 COL16A1Q07092 1604 aaPredicted RBP15.87■□□□□ 0.13
APEX1-218ENST00000557344 FGD6Q6ZV73 1430 aa15.87■□□□□ 0.13
APEX1-218ENST00000557344 SLC52A1Q9NWF4 448 aa15.87■□□□□ 0.13
APEX1-218ENST00000557344 ADGRB3O60242 1522 aa15.86■□□□□ 0.13
APEX1-218ENST00000557344 MEX3CQ5U5Q3 659 aaKnown RBP15.85■□□□□ 0.13
APEX1-218ENST00000557344 TRIM52Q96A61 297 aa15.85■□□□□ 0.13
APEX1-218ENST00000557344 PLEKHG1Q9ULL1 1385 aa15.84■□□□□ 0.13
APEX1-218ENST00000557344 NCOA3Q9Y6Q9 1424 aa15.84■□□□□ 0.13
APEX1-218ENST00000557344 CROCC2H7BZ55 1655 aa15.83■□□□□ 0.13
APEX1-218ENST00000557344 ZFYVE9O95405 1425 aa15.83■□□□□ 0.12
APEX1-218ENST00000557344 DAPK1P53355 1430 aa15.83■□□□□ 0.12
APEX1-218ENST00000557344 CHD2O14647 1828 aaKnown RBP15.82■□□□□ 0.12
APEX1-218ENST00000557344 RXRBP28702 533 aa15.82■□□□□ 0.12
APEX1-218ENST00000557344 TBX22Q9Y458 520 aa15.82■□□□□ 0.12
APEX1-218ENST00000557344 ANKRD30AQ9BXX3 1397 aa15.8■□□□□ 0.12
APEX1-218ENST00000557344 HDGFP51858 240 aaKnown RBP15.8■□□□□ 0.12
APEX1-218ENST00000557344 CADPS2Q86UW7 1296 aa15.8■□□□□ 0.12
APEX1-218ENST00000557344 C19orf44Q9H6X5 657 aa15.8■□□□□ 0.12
APEX1-218ENST00000557344 AHDC1Q5TGY3 1603 aaPredicted RBP15.79■□□□□ 0.12
APEX1-218ENST00000557344 RIMS2Q9UQ26 1411 aa15.79■□□□□ 0.12
APEX1-218ENST00000557344 PPP1R15AO75807 674 aaPredicted RBP15.79■□□□□ 0.12
APEX1-218ENST00000557344 C14orf37Q86TY3 774 aa15.79■□□□□ 0.12
APEX1-218ENST00000557344 CHIC2Q9UKJ5 165 aa15.79■□□□□ 0.12
APEX1-218ENST00000557344 PTPN23Q9H3S7 1636 aa15.79■□□□□ 0.12
APEX1-218ENST00000557344 SHPRHQ149N8 1683 aa15.78■□□□□ 0.12
APEX1-218ENST00000557344 CDK12Q9NYV4 1490 aaPredicted RBP15.78■□□□□ 0.12
APEX1-218ENST00000557344 ATF3P18847 181 aa15.77■□□□□ 0.12
APEX1-218ENST00000557344 RPRD2Q5VT52 1461 aaKnown RBP15.77■□□□□ 0.11
APEX1-218ENST00000557344 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.75■□□□□ 0.11
APEX1-218ENST00000557344 NUTM2BA6NNL0 878 aaPredicted RBP15.75■□□□□ 0.11
APEX1-218ENST00000557344 NUTM2EB1AL46 878 aaPredicted RBP15.75■□□□□ 0.11
APEX1-218ENST00000557344 BRINP3Q76B58 766 aa15.75■□□□□ 0.11
APEX1-218ENST00000557344 NUTM2AQ8IVF1 878 aaPredicted RBP15.75■□□□□ 0.11
APEX1-218ENST00000557344 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.75■□□□□ 0.11
APEX1-218ENST00000557344 ADAMTS13Q76LX8 1427 aa15.75■□□□□ 0.11
APEX1-218ENST00000557344 TMEM131LA2VDJ0 1609 aa15.74■□□□□ 0.11
APEX1-218ENST00000557344 PIK3R4Q99570 1358 aa15.74■□□□□ 0.11
APEX1-218ENST00000557344 MYO5BQ9ULV0 1848 aa15.73■□□□□ 0.11
APEX1-218ENST00000557344 AFF2P51816 1311 aa15.73■□□□□ 0.11
APEX1-218ENST00000557344 DIP2AQ14689 1571 aa15.73■□□□□ 0.11
APEX1-218ENST00000557344 APLP2Q06481 763 aa15.72■□□□□ 0.11
APEX1-218ENST00000557344 GCC2Q8IWJ2 1684 aa15.71■□□□□ 0.11
APEX1-218ENST00000557344 SETD5Q9C0A6 1442 aa15.7■□□□□ 0.1
APEX1-218ENST00000557344 NUTM2DQ5VT03 806 aaPredicted RBP15.7■□□□□ 0.1
APEX1-218ENST00000557344 AMOTL2Q9Y2J4 779 aa15.7■□□□□ 0.1
APEX1-218ENST00000557344 ADGRL2O95490 1459 aa15.7■□□□□ 0.1
APEX1-218ENST00000557344 CHGAP10645 457 aaKnown RBP15.69■□□□□ 0.1
APEX1-218ENST00000557344 ANKRD50Q9ULJ7 1429 aa15.68■□□□□ 0.1
APEX1-218ENST00000557344 RBM6P78332 1123 aaKnown RBP15.68■□□□□ 0.1
APEX1-218ENST00000557344 QTRT2Q9H974 415 aaKnown RBP15.68■□□□□ 0.1
APEX1-218ENST00000557344 RGS12O14924 1447 aa15.68■□□□□ 0.1
APEX1-218ENST00000557344 DCCP43146 1447 aa15.68■□□□□ 0.1
APEX1-218ENST00000557344 PTPRUQ92729 1446 aa15.68■□□□□ 0.1
APEX1-218ENST00000557344 LRRC59Q96AG4 307 aaKnown RBP15.67■□□□□ 0.1
APEX1-218ENST00000557344 ASXL1Q8IXJ9 1541 aa15.67■□□□□ 0.1
APEX1-218ENST00000557344 C8orf37Q96NL8 207 aa15.66■□□□□ 0.1
APEX1-218ENST00000557344 TRPM2O94759 1503 aa15.65■□□□□ 0.1
APEX1-218ENST00000557344 MST1RQ04912 1400 aa15.64■□□□□ 0.09
APEX1-218ENST00000557344 SRCAPQ6ZRS2 3230 aa15.63■□□□□ 0.09
APEX1-218ENST00000557344 PNPLA6Q8IY17 1366 aa15.62■□□□□ 0.09
APEX1-218ENST00000557344 NHSL1Q5SYE7 1610 aa15.62■□□□□ 0.09
APEX1-218ENST00000557344 DDX17Q92841 729 aaKnown RBP15.61■□□□□ 0.09
APEX1-218ENST00000557344 NGLY1Q96IV0 654 aa15.6■□□□□ 0.09
APEX1-218ENST00000557344 UNC13BO14795 1591 aa15.6■□□□□ 0.09
APEX1-218ENST00000557344 FAM50AQ14320 339 aaKnown RBP15.59■□□□□ 0.09
APEX1-218ENST00000557344 E9PCH4 1651 aa15.59■□□□□ 0.09
APEX1-218ENST00000557344 XRN1Q8IZH2 1706 aaKnown RBP15.59■□□□□ 0.09
APEX1-218ENST00000557344 ADAMTS2O95450 1211 aa15.58■□□□□ 0.08
APEX1-218ENST00000557344 ATAD2Q6PL18 1390 aa15.58■□□□□ 0.08
APEX1-218ENST00000557344 METP08581 1390 aa15.57■□□□□ 0.08
APEX1-218ENST00000557344 ADGRL3Q9HAR2 1447 aa15.56■□□□□ 0.08
APEX1-218ENST00000557344 SETBP1Q9Y6X0 1596 aa15.56■□□□□ 0.08
APEX1-218ENST00000557344 NRXN3Q9Y4C0 1643 aa15.56■□□□□ 0.08
APEX1-218ENST00000557344 ZRANB1Q9UGI0 708 aa15.55■□□□□ 0.08
APEX1-218ENST00000557344 FOXD1Q16676 465 aa15.54■□□□□ 0.08
APEX1-218ENST00000557344 USP21Q9UK80 565 aa15.54■□□□□ 0.08
APEX1-218ENST00000557344 FNBP4Q8N3X1 1017 aaPredicted RBP15.53■□□□□ 0.08
APEX1-218ENST00000557344 TRPC5Q9UL62 973 aaPredicted RBP15.53■□□□□ 0.08
APEX1-218ENST00000557344 IQGAP3Q86VI3 1631 aa15.53■□□□□ 0.08
APEX1-218ENST00000557344 SOS2Q07890 1332 aaPredicted RBP15.52■□□□□ 0.08
APEX1-218ENST00000557344 C1orf167Q5SNV9 1468 aa15.52■□□□□ 0.07
APEX1-218ENST00000557344 NUP155O75694 1391 aa15.51■□□□□ 0.07
APEX1-218ENST00000557344 CCDC125Q86Z20 511 aa15.5■□□□□ 0.07
APEX1-218ENST00000557344 ATRNO75882 1429 aa15.5■□□□□ 0.07
APEX1-218ENST00000557344 PTCH1Q13635 1447 aa15.5■□□□□ 0.07
APEX1-218ENST00000557344 LAMC1P11047 1609 aa15.5■□□□□ 0.07
APEX1-218ENST00000557344 ROCK1Q13464 1354 aa15.49■□□□□ 0.07
APEX1-218ENST00000557344 ZNF326Q5BKZ1 582 aaKnown RBP15.49■□□□□ 0.07
APEX1-218ENST00000557344 ORAI2Q96SN7 254 aa15.49■□□□□ 0.07
APEX1-218ENST00000557344 NALCNQ8IZF0 1738 aa15.48■□□□□ 0.07
APEX1-218ENST00000557344 PPARGC1BQ86YN6 1023 aaKnown RBP15.45■□□□□ 0.06
APEX1-218ENST00000557344 BCL9LQ86UU0 1499 aa15.44■□□□□ 0.06
APEX1-218ENST00000557344 ROBO2Q9HCK4 1378 aa15.43■□□□□ 0.06
APEX1-218ENST00000557344 COL22A1Q8NFW1 1626 aaPredicted RBP15.43■□□□□ 0.06
APEX1-218ENST00000557344 NEXMIFQ5QGS0 1516 aa15.43■□□□□ 0.06
APEX1-218ENST00000557344 MYOM2P54296 1465 aa15.42■□□□□ 0.06
APEX1-218ENST00000557344 EP400Q96L91 3159 aa15.42■□□□□ 0.06
APEX1-218ENST00000557344 GJD4Q96KN9 370 aaPredicted RBP15.42■□□□□ 0.06
APEX1-218ENST00000557344 SPHKAPQ2M3C7 1700 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms