RNA–Protein interactions for RNA: ENST00000556309.5

SUPT16H-206, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 3

Gene SUPT16H, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-206ENST00000556309 NUDT18Q6ZVK8 323 aa8.73□□□□□ -1.01
SUPT16H-206ENST00000556309 ZNF516Q92618 1163 aa8.73□□□□□ -1.01
SUPT16H-206ENST00000556309 ZPR1O75312 459 aa8.72□□□□□ -1.01
SUPT16H-206ENST00000556309 PKDCCQ504Y2 493 aa8.72□□□□□ -1.01
SUPT16H-206ENST00000556309 ZNF775Q96BV0 537 aaPredicted RBP8.72□□□□□ -1.01
SUPT16H-206ENST00000556309 FAM198AQ9UFP1 575 aa8.72□□□□□ -1.01
SUPT16H-206ENST00000556309 OSBPP22059 807 aa8.71□□□□□ -1.02
SUPT16H-206ENST00000556309 SLC19A1P41440 591 aa8.7□□□□□ -1.02
SUPT16H-206ENST00000556309 RBM26Q5T8P6 1007 aaKnown RBP8.7□□□□□ -1.02
SUPT16H-206ENST00000556309 TTC13Q8NBP0 860 aa8.7□□□□□ -1.02
SUPT16H-206ENST00000556309 SMYD5Q6GMV2 418 aa8.68□□□□□ -1.02
SUPT16H-206ENST00000556309 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.68□□□□□ -1.02
SUPT16H-206ENST00000556309 ZNF598Q86UK7 904 aaKnown RBP8.68□□□□□ -1.02
SUPT16H-206ENST00000556309 ANKLE1Q8NAG6 615 aa8.68□□□□□ -1.02
SUPT16H-206ENST00000556309 PCDHB3Q9Y5E6 796 aa8.68□□□□□ -1.02
SUPT16H-206ENST00000556309 COPS2P61201 443 aa8.67□□□□□ -1.02
SUPT16H-206ENST00000556309 SWT1Q5T5J6 900 aaKnown RBP8.67□□□□□ -1.02
SUPT16H-206ENST00000556309 NKX2-3Q8TAU0 364 aa8.67□□□□□ -1.02
SUPT16H-206ENST00000556309 LMOD2Q6P5Q4 547 aa8.66□□□□□ -1.02
SUPT16H-206ENST00000556309 TULP1O00294 542 aaPredicted RBP8.65□□□□□ -1.02
SUPT16H-206ENST00000556309 SPRYD7Q5W111 196 aa8.65□□□□□ -1.02
SUPT16H-206ENST00000556309 CDHR5Q9HBB8 845 aa8.65□□□□□ -1.02
SUPT16H-206ENST00000556309 NUTM2FA1L443 756 aa8.64□□□□□ -1.03
SUPT16H-206ENST00000556309 MYT1Q01538 1121 aa8.64□□□□□ -1.03
SUPT16H-206ENST00000556309 RNF223E7ERA6 249 aa8.63□□□□□ -1.03
SUPT16H-206ENST00000556309 KMT5BQ4FZB7 885 aa8.63□□□□□ -1.03
SUPT16H-206ENST00000556309 C3orf80F5H4A9 247 aa8.62□□□□□ -1.03
SUPT16H-206ENST00000556309 TRIM67Q6ZTA4 783 aa8.62□□□□□ -1.03
SUPT16H-206ENST00000556309 PADI6Q6TGC4 694 aa8.61□□□□□ -1.03
SUPT16H-206ENST00000556309 EYA1Q99502 592 aa8.61□□□□□ -1.03
SUPT16H-206ENST00000556309 DNAJB2P25686 324 aa8.6□□□□□ -1.03
SUPT16H-206ENST00000556309 GPIHBP1Q8IV16 184 aa8.59□□□□□ -1.03
SUPT16H-206ENST00000556309 ACTN4O43707 911 aaKnown RBP8.58□□□□□ -1.04
SUPT16H-206ENST00000556309 ZNF697Q5TEC3 545 aa8.58□□□□□ -1.04
SUPT16H-206ENST00000556309 RBM46Q8TBY0 533 aaKnown RBP8.58□□□□□ -1.04
SUPT16H-206ENST00000556309 NPDC1Q9NQX5 325 aaPredicted RBP8.58□□□□□ -1.04
SUPT16H-206ENST00000556309 NR1I2O75469 434 aa8.57□□□□□ -1.04
SUPT16H-206ENST00000556309 BLOC1S3Q6QNY0 202 aa8.57□□□□□ -1.04
SUPT16H-206ENST00000556309 TREML4Q6UXN2 200 aa8.57□□□□□ -1.04
SUPT16H-206ENST00000556309 FAM187AA6NFU0 413 aa8.56□□□□□ -1.04
SUPT16H-206ENST00000556309 ADH1BP00325 375 aa8.56□□□□□ -1.04
SUPT16H-206ENST00000556309 GPR37O15354 613 aa8.55□□□□□ -1.04
SUPT16H-206ENST00000556309 GDF9O60383 454 aa8.55□□□□□ -1.04
SUPT16H-206ENST00000556309 PTGDRQ13258 359 aa8.55□□□□□ -1.04
SUPT16H-206ENST00000556309 CRIPAKQ8N1N5 446 aa8.55□□□□□ -1.04
SUPT16H-206ENST00000556309 ZC3H15Q8WU90 426 aaKnown RBP8.55□□□□□ -1.04
SUPT16H-206ENST00000556309 TPRNQ4KMQ1 711 aa8.54□□□□□ -1.04
SUPT16H-206ENST00000556309 RSPH4AQ5TD94 716 aa8.54□□□□□ -1.04
SUPT16H-206ENST00000556309 TMEM134Q9H6X4 195 aa8.54□□□□□ -1.04
SUPT16H-206ENST00000556309 FCHSD2O94868 740 aa8.53□□□□□ -1.04
SUPT16H-206ENST00000556309 PRKCSHP14314 528 aaPredicted RBP8.53□□□□□ -1.04
SUPT16H-206ENST00000556309 FECHP22830 423 aa8.53□□□□□ -1.04
SUPT16H-206ENST00000556309 EMID1Q96A84 441 aaPredicted RBP8.52□□□□□ -1.05
SUPT16H-206ENST00000556309 S1PR4O95977 384 aa8.51□□□□□ -1.05
SUPT16H-206ENST00000556309 CTC1Q2NKJ3 1217 aa8.51□□□□□ -1.05
SUPT16H-206ENST00000556309 LIAT1Q6ZQX7 453 aa8.51□□□□□ -1.05
SUPT16H-206ENST00000556309 SLC6A16Q9GZN6 736 aa8.51□□□□□ -1.05
SUPT16H-206ENST00000556309 RPIAP49247 311 aa8.5□□□□□ -1.05
SUPT16H-206ENST00000556309 AAASQ9NRG9 546 aa8.5□□□□□ -1.05
SUPT16H-206ENST00000556309 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.49□□□□□ -1.05
SUPT16H-206ENST00000556309 GNPATO15228 680 aa8.49□□□□□ -1.05
SUPT16H-206ENST00000556309 HIC1Q14526 733 aa8.49□□□□□ -1.05
SUPT16H-206ENST00000556309 FAM161AQ3B820 660 aa8.49□□□□□ -1.05
SUPT16H-206ENST00000556309 STK17AQ9UEE5 414 aa8.49□□□□□ -1.05
SUPT16H-206ENST00000556309 CFHP08603 1231 aa8.48□□□□□ -1.05
SUPT16H-206ENST00000556309 INSM1Q01101 510 aaPredicted RBP8.48□□□□□ -1.05
SUPT16H-206ENST00000556309 LCE2AQ5TA79 106 aaPredicted RBP8.48□□□□□ -1.05
SUPT16H-206ENST00000556309 TNFRSF10AO00220 468 aa8.47□□□□□ -1.05
SUPT16H-206ENST00000556309 TLL1O43897 1013 aa8.47□□□□□ -1.05
SUPT16H-206ENST00000556309 ZMYND10O75800 440 aa8.47□□□□□ -1.05
SUPT16H-206ENST00000556309 AVPP01185 164 aa8.47□□□□□ -1.05
SUPT16H-206ENST00000556309 CD2BP2O95400 341 aaKnown RBP8.46□□□□□ -1.06
SUPT16H-206ENST00000556309 SMCPP49901 116 aaPredicted RBP8.46□□□□□ -1.06
SUPT16H-206ENST00000556309 BARGINQ6ZT62 677 aa8.46□□□□□ -1.06
SUPT16H-206ENST00000556309 KRI1Q8N9T8 703 aaKnown RBP8.46□□□□□ -1.06
SUPT16H-206ENST00000556309 ADGRG1Q9Y653 693 aa8.46□□□□□ -1.06
SUPT16H-206ENST00000556309 POTECB2RU33 542 aa8.45□□□□□ -1.06
SUPT16H-206ENST00000556309 RCCD1A6NED2 376 aa8.44□□□□□ -1.06
SUPT16H-206ENST00000556309 PPEF1O14829 653 aaPredicted RBP8.44□□□□□ -1.06
SUPT16H-206ENST00000556309 WFS1O76024 890 aa8.44□□□□□ -1.06
SUPT16H-206ENST00000556309 OATP04181 439 aa8.44□□□□□ -1.06
SUPT16H-206ENST00000556309 AXIN1O15169 862 aa8.43□□□□□ -1.06
SUPT16H-206ENST00000556309 WIPF1O43516 503 aa8.43□□□□□ -1.06
SUPT16H-206ENST00000556309 SLC24A3Q9HC58 644 aa8.43□□□□□ -1.06
SUPT16H-206ENST00000556309 SCUBE3Q8IX30 993 aa8.42□□□□□ -1.06
SUPT16H-206ENST00000556309 CYP4X1Q8N118 509 aa8.42□□□□□ -1.06
SUPT16H-206ENST00000556309 SPSB2Q99619 263 aa8.42□□□□□ -1.06
SUPT16H-206ENST00000556309 PKD2L1Q9P0L9 805 aa8.42□□□□□ -1.06
SUPT16H-206ENST00000556309 C11orf95C9JLR9 678 aaPredicted RBP8.4□□□□□ -1.06
SUPT16H-206ENST00000556309 IRF6O14896 467 aa8.4□□□□□ -1.06
SUPT16H-206ENST00000556309 ST8SIA5O15466 376 aa8.4□□□□□ -1.06
SUPT16H-206ENST00000556309 MAP2K5Q13163 448 aa8.4□□□□□ -1.06
SUPT16H-206ENST00000556309 CCDC102AQ96A19 550 aa8.4□□□□□ -1.06
SUPT16H-206ENST00000556309 TOR4AQ9NXH8 423 aa8.4□□□□□ -1.06
SUPT16H-206ENST00000556309 MINK1Q8N4C8 1332 aaPredicted RBP8.39□□□□□ -1.07
SUPT16H-206ENST00000556309 NLRP7Q8WX94 980 aa8.39□□□□□ -1.07
SUPT16H-206ENST00000556309 FOXC1Q12948 553 aa8.38□□□□□ -1.07
SUPT16H-206ENST00000556309 PHOX2BQ99453 314 aa8.38□□□□□ -1.07
SUPT16H-206ENST00000556309 SENP2Q9HC62 589 aa8.38□□□□□ -1.07
SUPT16H-206ENST00000556309 SALL2Q9Y467 1007 aaPredicted RBP8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms