RNA–Protein interactions for RNA: ENST00000556247.1

LRP1-210, Transcript of LDL receptor related protein 1, humanhuman

TSL 3

Gene LRP1, Length 611 nt, Biotype retained intron, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-210ENST00000556247 ADGRF5Q8IZF2 1346 aa24.17■■□□□ 1.46
LRP1-210ENST00000556247 PPLO60437 1756 aa24.16■■□□□ 1.46
LRP1-210ENST00000556247 HIRIP3Q9BW71 556 aaPredicted RBP24.16■■□□□ 1.46
LRP1-210ENST00000556247 MYO5BQ9ULV0 1848 aa24.15■■□□□ 1.46
LRP1-210ENST00000556247 NBPF1Q3BBV0 1214 aa24.14■■□□□ 1.45
LRP1-210ENST00000556247 A2ML1A8K2U0 1454 aa24.13■■□□□ 1.45
LRP1-210ENST00000556247 NLRP1Q9C000 1473 aa24.13■■□□□ 1.45
LRP1-210ENST00000556247 NEXMIFQ5QGS0 1516 aa24.13■■□□□ 1.45
LRP1-210ENST00000556247 NRXN1Q9ULB1 1477 aa24.12■■□□□ 1.45
LRP1-210ENST00000556247 NUTM2DQ5VT03 806 aaPredicted RBP24.11■■□□□ 1.45
LRP1-210ENST00000556247 GPRASP1Q5JY77 1395 aa24.11■■□□□ 1.45
LRP1-210ENST00000556247 USP47Q96K76 1375 aa24.1■■□□□ 1.45
LRP1-210ENST00000556247 ZFYVE9O95405 1425 aa24.1■■□□□ 1.45
LRP1-210ENST00000556247 HDGFP51858 240 aaKnown RBP24.09■■□□□ 1.45
LRP1-210ENST00000556247 KIAA1210Q9ULL0 1709 aa24.09■■□□□ 1.45
LRP1-210ENST00000556247 CFAP70Q5T0N1 1121 aa24.08■■□□□ 1.45
LRP1-210ENST00000556247 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.07■■□□□ 1.44
LRP1-210ENST00000556247 KDM5AP29375 1690 aaKnown RBP24.07■■□□□ 1.44
LRP1-210ENST00000556247 RIMS2Q9UQ26 1411 aa24.07■■□□□ 1.44
LRP1-210ENST00000556247 LAMC1P11047 1609 aa24.06■■□□□ 1.44
LRP1-210ENST00000556247 PIK3C2GO75747 1445 aa24.05■■□□□ 1.44
LRP1-210ENST00000556247 C14orf93Q9H972 538 aaKnown RBP24.05■■□□□ 1.44
LRP1-210ENST00000556247 UBR1Q8IWV7 1749 aa24.04■■□□□ 1.44
LRP1-210ENST00000556247 DIEXFQ68CQ4 756 aaKnown RBP24.02■■□□□ 1.44
LRP1-210ENST00000556247 THEMISQ8N1K5 641 aaPredicted RBP24■■□□□ 1.43
LRP1-210ENST00000556247 TMEM2Q9UHN6 1383 aa24■■□□□ 1.43
LRP1-210ENST00000556247 PTPRMP28827 1452 aa24■■□□□ 1.43
LRP1-210ENST00000556247 MYO3AQ8NEV4 1616 aa23.99■■□□□ 1.43
LRP1-210ENST00000556247 ST20-MTHFSA0A0A6YYL1 179 aa23.99■■□□□ 1.43
LRP1-210ENST00000556247 SCAF11Q99590 1463 aaKnown RBP23.97■■□□□ 1.43
LRP1-210ENST00000556247 SETD1BQ9UPS6 1966 aaKnown RBP23.96■■□□□ 1.43
LRP1-210ENST00000556247 SETBP1Q9Y6X0 1596 aa23.96■■□□□ 1.43
LRP1-210ENST00000556247 EID1Q9Y6B2 187 aa23.96■■□□□ 1.43
LRP1-210ENST00000556247 SENP3Q9H4L4 574 aaPredicted RBP23.95■■□□□ 1.42
LRP1-210ENST00000556247 EIF3AQ14152 1382 aaKnown RBP23.93■■□□□ 1.42
LRP1-210ENST00000556247 IQGAP1P46940 1657 aa23.93■■□□□ 1.42
LRP1-210ENST00000556247 TMEM132EQ6IEE7 984 aa23.93■■□□□ 1.42
LRP1-210ENST00000556247 TXNDC2Q86VQ3 553 aa23.93■■□□□ 1.42
LRP1-210ENST00000556247 CEP170BQ9Y4F5 1589 aaPredicted RBP23.93■■□□□ 1.42
LRP1-210ENST00000556247 BCANQ96GW7 911 aa23.92■■□□□ 1.42
LRP1-210ENST00000556247 DDX10Q13206 875 aaKnown RBP23.9■■□□□ 1.42
LRP1-210ENST00000556247 SLIT1O75093 1534 aa23.89■■□□□ 1.42
LRP1-210ENST00000556247 WASHC2AQ641Q2 1341 aa23.89■■□□□ 1.42
LRP1-210ENST00000556247 ARHGAP23Q9P227 1491 aa23.89■■□□□ 1.42
LRP1-210ENST00000556247 ALKQ9UM73 1620 aa23.89■■□□□ 1.42
LRP1-210ENST00000556247 C11orf95C9JLR9 678 aaPredicted RBP23.89■■□□□ 1.41
LRP1-210ENST00000556247 ADGRB1O14514 1584 aa23.89■■□□□ 1.41
LRP1-210ENST00000556247 CCDC7Q96M83 1385 aa23.89■■□□□ 1.41
LRP1-210ENST00000556247 LTKP29376 864 aa23.88■■□□□ 1.41
LRP1-210ENST00000556247 TRAK1Q9UPV9 953 aa23.88■■□□□ 1.41
LRP1-210ENST00000556247 ZNF142P52746 1687 aaPredicted RBP23.86■■□□□ 1.41
LRP1-210ENST00000556247 PLEKHG1Q9ULL1 1385 aa23.86■■□□□ 1.41
LRP1-210ENST00000556247 KIF7Q2M1P5 1343 aa23.85■■□□□ 1.41
LRP1-210ENST00000556247 KDM4FA0A1W2PPD8 638 aa23.85■■□□□ 1.41
LRP1-210ENST00000556247 SLC24A1O60721 1099 aa23.84■■□□□ 1.41
LRP1-210ENST00000556247 TESK2Q96S53 571 aa23.84■■□□□ 1.41
LRP1-210ENST00000556247 TMF1P82094 1093 aa23.83■■□□□ 1.41
LRP1-210ENST00000556247 POLR3GLQ9BT43 218 aa23.83■■□□□ 1.41
LRP1-210ENST00000556247 STK26Q9P289 416 aa23.83■■□□□ 1.41
LRP1-210ENST00000556247 POLR1AO95602 1720 aaPredicted RBP23.83■■□□□ 1.41
LRP1-210ENST00000556247 ANKLE2Q86XL3 938 aa23.81■■□□□ 1.4
LRP1-210ENST00000556247 CENPJQ9HC77 1338 aaPredicted RBP23.81■■□□□ 1.4
LRP1-210ENST00000556247 NRXN3Q9Y4C0 1643 aa23.81■■□□□ 1.4
LRP1-210ENST00000556247 ASXL1Q8IXJ9 1541 aa23.8■■□□□ 1.4
LRP1-210ENST00000556247 YTHDC2Q9H6S0 1430 aaKnown RBP23.8■■□□□ 1.4
LRP1-210ENST00000556247 LRPPRCP42704 1394 aaKnown RBP23.77■■□□□ 1.4
LRP1-210ENST00000556247 SETD1AO15047 1707 aaKnown RBP23.76■■□□□ 1.39
LRP1-210ENST00000556247 CDCA8Q53HL2 280 aa23.76■■□□□ 1.39
LRP1-210ENST00000556247 ADAMTS13Q76LX8 1427 aa23.76■■□□□ 1.39
LRP1-210ENST00000556247 TBX22Q9Y458 520 aa23.75■■□□□ 1.39
LRP1-210ENST00000556247 METP08581 1390 aa23.75■■□□□ 1.39
LRP1-210ENST00000556247 SLC26A8Q96RN1 970 aa23.74■■□□□ 1.39
LRP1-210ENST00000556247 DISP3Q9P2K9 1392 aa23.74■■□□□ 1.39
LRP1-210ENST00000556247 POGKQ9P215 609 aa23.73■■□□□ 1.39
LRP1-210ENST00000556247 ABCC11Q96J66 1382 aa23.73■■□□□ 1.39
LRP1-210ENST00000556247 SBNO2Q9Y2G9 1366 aa23.73■■□□□ 1.39
LRP1-210ENST00000556247 ARHGEF28Q8N1W1 1705 aaKnown RBP23.73■■□□□ 1.39
LRP1-210ENST00000556247 MED14O60244 1454 aa23.71■■□□□ 1.39
LRP1-210ENST00000556247 PRAM1Q96QH2 718 aa23.7■■□□□ 1.38
LRP1-210ENST00000556247 QRICH2Q9H0J4 1663 aa23.7■■□□□ 1.38
LRP1-210ENST00000556247 DLC1Q96QB1 1528 aa23.69■■□□□ 1.38
LRP1-210ENST00000556247 DIP2AQ14689 1571 aa23.69■■□□□ 1.38
LRP1-210ENST00000556247 SAFB2Q14151 953 aaKnown RBP eCLIP23.68■■□□□ 1.38
LRP1-210ENST00000556247 SIRT1Q96EB6 747 aa23.68■■□□□ 1.38
LRP1-210ENST00000556247 MIER1Q8N108 512 aa23.67■■□□□ 1.38
LRP1-210ENST00000556247 NCKAP5LQ9HCH0 1330 aa23.65■■□□□ 1.38
LRP1-210ENST00000556247 EVC2Q86UK5 1308 aa23.64■■□□□ 1.38
LRP1-210ENST00000556247 NPHP4O75161 1426 aaPredicted RBP23.64■■□□□ 1.37
LRP1-210ENST00000556247 TECPR2O15040 1411 aa23.63■■□□□ 1.37
LRP1-210ENST00000556247 KNDC1Q76NI1 1749 aa23.63■■□□□ 1.37
LRP1-210ENST00000556247 WAPLQ7Z5K2 1190 aa23.63■■□□□ 1.37
LRP1-210ENST00000556247 MINK1Q8N4C8 1332 aaPredicted RBP23.62■■□□□ 1.37
LRP1-210ENST00000556247 ANP32CO43423 234 aa23.62■■□□□ 1.37
LRP1-210ENST00000556247 AMOTL2Q9Y2J4 779 aa23.62■■□□□ 1.37
LRP1-210ENST00000556247 PIK3R4Q99570 1358 aa23.62■■□□□ 1.37
LRP1-210ENST00000556247 FAM135BQ49AJ0 1406 aa23.61■■□□□ 1.37
LRP1-210ENST00000556247 PUS7Q96PZ0 661 aaKnown RBP23.6■■□□□ 1.37
LRP1-210ENST00000556247 PTPRUQ92729 1446 aa23.59■■□□□ 1.37
LRP1-210ENST00000556247 CPS1P31327 1500 aa23.59■■□□□ 1.37
LRP1-210ENST00000556247 PLEKHH1Q9ULM0 1364 aa23.58■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms