RNA–Protein interactions for RNA: ENST00000556011.5

PSEN1-215, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 442 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-215ENST00000556011 MAST1Q9Y2H9 1570 aa14.13□□□□□ -0.15
PSEN1-215ENST00000556011 GLI3P10071 1580 aa14.11□□□□□ -0.15
PSEN1-215ENST00000556011 LTKP29376 864 aa14.11□□□□□ -0.15
PSEN1-215ENST00000556011 MLLT1Q03111 559 aaPredicted RBP14.11□□□□□ -0.15
PSEN1-215ENST00000556011 LRRC59Q96AG4 307 aaKnown RBP14.11□□□□□ -0.15
PSEN1-215ENST00000556011 MYOM1P52179 1685 aa14.1□□□□□ -0.15
PSEN1-215ENST00000556011 RGPD1P0DJD0 1748 aa14.1□□□□□ -0.15
PSEN1-215ENST00000556011 MYO5CQ9NQX4 1742 aa14.1□□□□□ -0.15
PSEN1-215ENST00000556011 SYT17Q9BSW7 474 aa14.1□□□□□ -0.15
PSEN1-215ENST00000556011 BRINP3Q76B58 766 aa14.09□□□□□ -0.15
PSEN1-215ENST00000556011 P3H3Q8IVL6 736 aa14.09□□□□□ -0.15
PSEN1-215ENST00000556011 KLRG1Q96E93 195 aa14.09□□□□□ -0.15
PSEN1-215ENST00000556011 MIA2Q96PC5 1412 aa14.08□□□□□ -0.15
PSEN1-215ENST00000556011 PDE4DIPQ5VU43 2346 aa14.08□□□□□ -0.16
PSEN1-215ENST00000556011 NUP153P49790 1475 aaKnown RBP14.08□□□□□ -0.16
PSEN1-215ENST00000556011 SEPT12Q8IYM1 358 aa14.08□□□□□ -0.16
PSEN1-215ENST00000556011 GPBP1L1Q9HC44 474 aaPredicted RBP14.07□□□□□ -0.16
PSEN1-215ENST00000556011 KRT27Q7Z3Y8 459 aa14.06□□□□□ -0.16
PSEN1-215ENST00000556011 FHDC1Q9C0D6 1143 aaPredicted RBP14.06□□□□□ -0.16
PSEN1-215ENST00000556011 ATP10DQ9P241 1426 aa14.06□□□□□ -0.16
PSEN1-215ENST00000556011 WDR90Q96KV7 1748 aa14.05□□□□□ -0.16
PSEN1-215ENST00000556011 TXNDC2Q86VQ3 553 aa14.05□□□□□ -0.16
PSEN1-215ENST00000556011 CTTNBP2Q8WZ74 1663 aa14.04□□□□□ -0.16
PSEN1-215ENST00000556011 DISP2A7MBM2 1401 aa14.04□□□□□ -0.16
PSEN1-215ENST00000556011 NKTRP30414 1462 aaKnown RBP14.04□□□□□ -0.16
PSEN1-215ENST00000556011 CAMKK2Q96RR4 588 aa14.03□□□□□ -0.16
PSEN1-215ENST00000556011 PZPP20742 1482 aa14.03□□□□□ -0.16
PSEN1-215ENST00000556011 TNS1Q9HBL0 1735 aaKnown RBP14.03□□□□□ -0.16
PSEN1-215ENST00000556011 NCOA2Q15596 1464 aa14.02□□□□□ -0.16
PSEN1-215ENST00000556011 HTRA3P83110 453 aa14.02□□□□□ -0.17
PSEN1-215ENST00000556011 GPR162Q16538 588 aa14.02□□□□□ -0.17
PSEN1-215ENST00000556011 DLC1Q96QB1 1528 aa14□□□□□ -0.17
PSEN1-215ENST00000556011 PTCH1Q13635 1447 aa13.99□□□□□ -0.17
PSEN1-215ENST00000556011 NUP188Q5SRE5 1749 aa13.99□□□□□ -0.17
PSEN1-215ENST00000556011 HSPA1AP0DMV8 641 aaKnown RBP13.99□□□□□ -0.17
PSEN1-215ENST00000556011 HSPA1BP0DMV9 641 aaKnown RBP13.99□□□□□ -0.17
PSEN1-215ENST00000556011 ARHGAP5Q13017 1502 aa13.99□□□□□ -0.17
PSEN1-215ENST00000556011 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.98□□□□□ -0.17
PSEN1-215ENST00000556011 NBPF8Q3BBV2 869 aa13.98□□□□□ -0.17
PSEN1-215ENST00000556011 NBPF14Q5TI25 921 aa13.98□□□□□ -0.17
PSEN1-215ENST00000556011 ZNF526Q8TF50 670 aaPredicted RBP13.98□□□□□ -0.17
PSEN1-215ENST00000556011 DDX17Q92841 729 aaKnown RBP13.98□□□□□ -0.17
PSEN1-215ENST00000556011 MROH1Q8NDA8 1641 aa13.97□□□□□ -0.17
PSEN1-215ENST00000556011 PLXNC1O60486 1568 aa13.97□□□□□ -0.17
PSEN1-215ENST00000556011 MPNDQ8N594 471 aa13.97□□□□□ -0.17
PSEN1-215ENST00000556011 ASXL1Q8IXJ9 1541 aa13.96□□□□□ -0.17
PSEN1-215ENST00000556011 UBR1Q8IWV7 1749 aa13.96□□□□□ -0.17
PSEN1-215ENST00000556011 RREB1Q92766 1687 aa13.96□□□□□ -0.17
PSEN1-215ENST00000556011 SLC26A8Q96RN1 970 aa13.96□□□□□ -0.17
PSEN1-215ENST00000556011 CUL9Q8IWT3 2517 aa13.96□□□□□ -0.18
PSEN1-215ENST00000556011 PTGER2P43116 358 aa13.95□□□□□ -0.18
PSEN1-215ENST00000556011 CADPS2Q86UW7 1296 aa13.95□□□□□ -0.18
PSEN1-215ENST00000556011 ATF3P18847 181 aa13.94□□□□□ -0.18
PSEN1-215ENST00000556011 C14orf37Q86TY3 774 aa13.94□□□□□ -0.18
PSEN1-215ENST00000556011 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.94□□□□□ -0.18
PSEN1-215ENST00000556011 DLL1O00548 723 aa13.93□□□□□ -0.18
PSEN1-215ENST00000556011 HNRNPMP52272 730 aaKnown RBP eCLIP13.93□□□□□ -0.18
PSEN1-215ENST00000556011 USP19O94966 1318 aa13.92□□□□□ -0.18
PSEN1-215ENST00000556011 A0A0C4DFX4 3053 aa13.92□□□□□ -0.18
PSEN1-215ENST00000556011 FAM182BQ5T319 152 aa13.92□□□□□ -0.18
PSEN1-215ENST00000556011 SAMD9LQ8IVG5 1584 aa13.92□□□□□ -0.18
PSEN1-215ENST00000556011 RGS19P49795 217 aa13.91□□□□□ -0.18
PSEN1-215ENST00000556011 CHIC1Q5VXU3 224 aa13.91□□□□□ -0.18
PSEN1-215ENST00000556011 MARF1Q9Y4F3 1742 aaKnown RBP13.9□□□□□ -0.18
PSEN1-215ENST00000556011 ZBTB7AO95365 584 aa13.9□□□□□ -0.18
PSEN1-215ENST00000556011 SLIT1O75093 1534 aa13.9□□□□□ -0.19
PSEN1-215ENST00000556011 CASZ1Q86V15 1759 aa13.89□□□□□ -0.19
PSEN1-215ENST00000556011 SAMD9Q5K651 1589 aa13.89□□□□□ -0.19
PSEN1-215ENST00000556011 ARHGAP35Q9NRY4 1499 aa13.89□□□□□ -0.19
PSEN1-215ENST00000556011 KIF3CO14782 793 aa13.88□□□□□ -0.19
PSEN1-215ENST00000556011 PELP1Q8IZL8 1130 aaKnown RBP13.88□□□□□ -0.19
PSEN1-215ENST00000556011 EID1Q9Y6B2 187 aa13.88□□□□□ -0.19
PSEN1-215ENST00000556011 ONECUT3O60422 494 aaPredicted RBP13.87□□□□□ -0.19
PSEN1-215ENST00000556011 PDGFDQ9GZP0 370 aaPredicted RBP13.87□□□□□ -0.19
PSEN1-215ENST00000556011 ATF5Q9Y2D1 282 aaPredicted RBP13.87□□□□□ -0.19
PSEN1-215ENST00000556011 PARD3Q8TEW0 1356 aa13.86□□□□□ -0.19
PSEN1-215ENST00000556011 UNC5CLQ8IV45 518 aa13.86□□□□□ -0.19
PSEN1-215ENST00000556011 PITPNM2Q9BZ72 1349 aa13.86□□□□□ -0.19
PSEN1-215ENST00000556011 C19orf44Q9H6X5 657 aa13.85□□□□□ -0.19
PSEN1-215ENST00000556011 ADGRB2O60241 1585 aa13.84□□□□□ -0.19
PSEN1-215ENST00000556011 TET3O43151 1660 aa13.84□□□□□ -0.19
PSEN1-215ENST00000556011 APBA3O96018 575 aa13.83□□□□□ -0.2
PSEN1-215ENST00000556011 CDC42BPBQ9Y5S2 1711 aa13.83□□□□□ -0.2
PSEN1-215ENST00000556011 A0A0G2JS52 829 aa13.82□□□□□ -0.2
PSEN1-215ENST00000556011 MYT1Q01538 1121 aa13.82□□□□□ -0.2
PSEN1-215ENST00000556011 ABHD8Q96I13 439 aa13.82□□□□□ -0.2
PSEN1-215ENST00000556011 CHD2O14647 1828 aaKnown RBP13.82□□□□□ -0.2
PSEN1-215ENST00000556011 FMN1Q68DA7 1419 aa13.81□□□□□ -0.2
PSEN1-215ENST00000556011 GPATCH8Q9UKJ3 1502 aaKnown RBP13.81□□□□□ -0.2
PSEN1-215ENST00000556011 NCOA3Q9Y6Q9 1424 aa13.81□□□□□ -0.2
PSEN1-215ENST00000556011 TRIM37O94972 964 aa13.8□□□□□ -0.2
PSEN1-215ENST00000556011 SPAG9O60271 1321 aaKnown RBP13.8□□□□□ -0.2
PSEN1-215ENST00000556011 WASHC2CQ9Y4E1 1318 aa13.76□□□□□ -0.21
PSEN1-215ENST00000556011 COL22A1Q8NFW1 1626 aaPredicted RBP13.75□□□□□ -0.21
PSEN1-215ENST00000556011 SLIT2O94813 1529 aa13.75□□□□□ -0.21
PSEN1-215ENST00000556011 ADCY9O60503 1353 aa13.75□□□□□ -0.21
PSEN1-215ENST00000556011 CFAP65Q6ZU64 1925 aaKnown RBP13.75□□□□□ -0.21
PSEN1-215ENST00000556011 CCDC85CA6NKD9 419 aa13.74□□□□□ -0.21
PSEN1-215ENST00000556011 PPP1R15AO75807 674 aaPredicted RBP13.74□□□□□ -0.21
PSEN1-215ENST00000556011 TOMM70O94826 608 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms