RNA–Protein interactions for RNA: ENST00000555855.5

FOXN3-211, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 851 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-211ENST00000555855 ANKRD50Q9ULJ7 1429 aa30.05■■■□□ 2.4
FOXN3-211ENST00000555855 ADGRB3O60242 1522 aa30.04■■■□□ 2.4
FOXN3-211ENST00000555855 MSH6P52701 1360 aa30.03■■■□□ 2.4
FOXN3-211ENST00000555855 RPRD2Q5VT52 1461 aaKnown RBP30.01■■■□□ 2.4
FOXN3-211ENST00000555855 SLAIN2Q9P270 581 aa30■■■□□ 2.39
FOXN3-211ENST00000555855 NKTRP30414 1462 aaKnown RBP29.99■■■□□ 2.39
FOXN3-211ENST00000555855 CHGAP10645 457 aaKnown RBP29.98■■■□□ 2.39
FOXN3-211ENST00000555855 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.97■■■□□ 2.39
FOXN3-211ENST00000555855 ROBO1Q9Y6N7 1651 aa29.96■■■□□ 2.39
FOXN3-211ENST00000555855 PLEKHG1Q9ULL1 1385 aa29.96■■■□□ 2.39
FOXN3-211ENST00000555855 RIMS2Q9UQ26 1411 aa29.96■■■□□ 2.39
FOXN3-211ENST00000555855 TBX22Q9Y458 520 aa29.95■■■□□ 2.39
FOXN3-211ENST00000555855 POTEAQ6S8J7 498 aa29.93■■■□□ 2.38
FOXN3-211ENST00000555855 NWD1Q149M9 1564 aa29.93■■■□□ 2.38
FOXN3-211ENST00000555855 ZFYVE9O95405 1425 aa29.92■■■□□ 2.38
FOXN3-211ENST00000555855 C14orf37Q86TY3 774 aa29.91■■■□□ 2.38
FOXN3-211ENST00000555855 CHD2O14647 1828 aaKnown RBP29.87■■■□□ 2.37
FOXN3-211ENST00000555855 MYO5BQ9ULV0 1848 aa29.87■■■□□ 2.37
FOXN3-211ENST00000555855 JCADQ9P266 1359 aa29.86■■■□□ 2.37
FOXN3-211ENST00000555855 NUTM2DQ5VT03 806 aaPredicted RBP29.85■■■□□ 2.37
FOXN3-211ENST00000555855 NCOA3Q9Y6Q9 1424 aa29.85■■■□□ 2.37
FOXN3-211ENST00000555855 TMEM131LA2VDJ0 1609 aa29.85■■■□□ 2.37
FOXN3-211ENST00000555855 GCC2Q8IWJ2 1684 aa29.85■■■□□ 2.37
FOXN3-211ENST00000555855 ATF3P18847 181 aa29.81■■■□□ 2.36
FOXN3-211ENST00000555855 CADPS2Q86UW7 1296 aa29.81■■■□□ 2.36
FOXN3-211ENST00000555855 C19orf44Q9H6X5 657 aa29.81■■■□□ 2.36
FOXN3-211ENST00000555855 PHLPP1O60346 1717 aa29.81■■■□□ 2.36
FOXN3-211ENST00000555855 ROCK1Q13464 1354 aa29.78■■■□□ 2.36
FOXN3-211ENST00000555855 PIK3R4Q99570 1358 aa29.77■■■□□ 2.36
FOXN3-211ENST00000555855 UNC13BO14795 1591 aa29.77■■■□□ 2.36
FOXN3-211ENST00000555855 NUP155O75694 1391 aa29.77■■■□□ 2.36
FOXN3-211ENST00000555855 ITGAEP38570 1179 aa29.75■■■□□ 2.35
FOXN3-211ENST00000555855 ADAMTS13Q76LX8 1427 aa29.75■■■□□ 2.35
FOXN3-211ENST00000555855 AMOTL2Q9Y2J4 779 aa29.74■■■□□ 2.35
FOXN3-211ENST00000555855 E9PCH4 1651 aa29.74■■■□□ 2.35
FOXN3-211ENST00000555855 MEX3CQ5U5Q3 659 aaKnown RBP29.73■■■□□ 2.35
FOXN3-211ENST00000555855 SPATA31A6Q5VVP1 1343 aa29.72■■■□□ 2.35
FOXN3-211ENST00000555855 DIP2AQ14689 1571 aa29.7■■■□□ 2.35
FOXN3-211ENST00000555855 IQGAP3Q86VI3 1631 aa29.68■■■□□ 2.34
FOXN3-211ENST00000555855 ZNF772Q68DY9 489 aaPredicted RBP29.67■■■□□ 2.34
FOXN3-211ENST00000555855 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.66■■■□□ 2.34
FOXN3-211ENST00000555855 ZNF326Q5BKZ1 582 aaKnown RBP29.66■■■□□ 2.34
FOXN3-211ENST00000555855 COL16A1Q07092 1604 aaPredicted RBP29.66■■■□□ 2.34
FOXN3-211ENST00000555855 TRPM2O94759 1503 aa29.65■■■□□ 2.34
FOXN3-211ENST00000555855 BRINP3Q76B58 766 aa29.61■■■□□ 2.33
FOXN3-211ENST00000555855 PTPRUQ92729 1446 aa29.6■■■□□ 2.33
FOXN3-211ENST00000555855 AHDC1Q5TGY3 1603 aaPredicted RBP29.58■■■□□ 2.33
FOXN3-211ENST00000555855 NUTM2BA6NNL0 878 aaPredicted RBP29.57■■■□□ 2.32
FOXN3-211ENST00000555855 NUTM2EB1AL46 878 aaPredicted RBP29.57■■■□□ 2.32
FOXN3-211ENST00000555855 NUTM2AQ8IVF1 878 aaPredicted RBP29.57■■■□□ 2.32
FOXN3-211ENST00000555855 PPARGC1BQ86YN6 1023 aaKnown RBP29.56■■■□□ 2.32
FOXN3-211ENST00000555855 LRP6O75581 1613 aa29.56■■■□□ 2.32
FOXN3-211ENST00000555855 TRIM52Q96A61 297 aa29.55■■■□□ 2.32
FOXN3-211ENST00000555855 DCCP43146 1447 aa29.54■■■□□ 2.32
FOXN3-211ENST00000555855 RXRBP28702 533 aa29.53■■■□□ 2.32
FOXN3-211ENST00000555855 SHPRHQ149N8 1683 aa29.51■■■□□ 2.31
FOXN3-211ENST00000555855 LRRC59Q96AG4 307 aaKnown RBP29.51■■■□□ 2.31
FOXN3-211ENST00000555855 SETD1AO15047 1707 aaKnown RBP29.51■■■□□ 2.31
FOXN3-211ENST00000555855 METP08581 1390 aa29.49■■■□□ 2.31
FOXN3-211ENST00000555855 SETBP1Q9Y6X0 1596 aa29.48■■■□□ 2.31
FOXN3-211ENST00000555855 UPF1Q92900 1129 aaKnown RBP eCLIP29.47■■■□□ 2.31
FOXN3-211ENST00000555855 SPHKAPQ2M3C7 1700 aa29.47■■■□□ 2.31
FOXN3-211ENST00000555855 NRXN3Q9Y4C0 1643 aa29.45■■■□□ 2.3
FOXN3-211ENST00000555855 MST1RQ04912 1400 aa29.45■■■□□ 2.3
FOXN3-211ENST00000555855 SETD5Q9C0A6 1442 aa29.45■■■□□ 2.3
FOXN3-211ENST00000555855 ASXL1Q8IXJ9 1541 aa29.44■■■□□ 2.3
FOXN3-211ENST00000555855 XRN1Q8IZH2 1706 aaKnown RBP29.43■■■□□ 2.3
FOXN3-211ENST00000555855 AFF2P51816 1311 aa29.42■■■□□ 2.3
FOXN3-211ENST00000555855 VGFO15240 615 aaPredicted RBP29.4■■■□□ 2.3
FOXN3-211ENST00000555855 ADGRL3Q9HAR2 1447 aa29.38■■■□□ 2.29
FOXN3-211ENST00000555855 DDX17Q92841 729 aaKnown RBP29.38■■■□□ 2.29
FOXN3-211ENST00000555855 C8orf37Q96NL8 207 aa29.37■■■□□ 2.29
FOXN3-211ENST00000555855 QTRT2Q9H974 415 aaKnown RBP29.35■■■□□ 2.29
FOXN3-211ENST00000555855 NEXMIFQ5QGS0 1516 aa29.34■■■□□ 2.29
FOXN3-211ENST00000555855 NHSL1Q5SYE7 1610 aa29.34■■■□□ 2.29
FOXN3-211ENST00000555855 KIF1BO60333 1816 aa29.34■■■□□ 2.29
FOXN3-211ENST00000555855 CDK12Q9NYV4 1490 aaPredicted RBP29.33■■■□□ 2.29
FOXN3-211ENST00000555855 CLTCL1P53675 1640 aa29.33■■■□□ 2.29
FOXN3-211ENST00000555855 RBM6P78332 1123 aaKnown RBP29.32■■■□□ 2.28
FOXN3-211ENST00000555855 PNPLA6Q8IY17 1366 aa29.31■■■□□ 2.28
FOXN3-211ENST00000555855 NGLY1Q96IV0 654 aa29.31■■■□□ 2.28
FOXN3-211ENST00000555855 RPGRIP1LQ68CZ1 1315 aa29.3■■■□□ 2.28
FOXN3-211ENST00000555855 C1orf167Q5SNV9 1468 aa29.29■■■□□ 2.28
FOXN3-211ENST00000555855 NAIPQ13075 1403 aa29.28■■■□□ 2.28
FOXN3-211ENST00000555855 ADAMTS2O95450 1211 aa29.28■■■□□ 2.28
FOXN3-211ENST00000555855 ORAI2Q96SN7 254 aa29.26■■■□□ 2.27
FOXN3-211ENST00000555855 SLC4A1APQ9BWU0 796 aaKnown RBP29.26■■■□□ 2.27
FOXN3-211ENST00000555855 NALCNQ8IZF0 1738 aa29.25■■■□□ 2.27
FOXN3-211ENST00000555855 RRBP1Q9P2E9 1410 aaKnown RBP29.24■■■□□ 2.27
FOXN3-211ENST00000555855 PTCH1Q13635 1447 aa29.23■■■□□ 2.27
FOXN3-211ENST00000555855 ROBO2Q9HCK4 1378 aa29.23■■■□□ 2.27
FOXN3-211ENST00000555855 SOS2Q07890 1332 aaPredicted RBP29.22■■■□□ 2.27
FOXN3-211ENST00000555855 USP21Q9UK80 565 aa29.18■■■□□ 2.26
FOXN3-211ENST00000555855 HFM1A2PYH4 1435 aa29.17■■■□□ 2.26
FOXN3-211ENST00000555855 RGS12O14924 1447 aa29.15■■■□□ 2.26
FOXN3-211ENST00000555855 ESCO1Q5FWF5 840 aa29.15■■■□□ 2.26
FOXN3-211ENST00000555855 TRPC5Q9UL62 973 aaPredicted RBP29.15■■■□□ 2.26
FOXN3-211ENST00000555855 NPHP3Q7Z494 1330 aa29.12■■■□□ 2.25
FOXN3-211ENST00000555855 LAMC1P11047 1609 aa29.12■■■□□ 2.25
FOXN3-211ENST00000555855 PRAG1Q86YV5 1406 aa29.11■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 9451.5 ms