RNA–Protein interactions for RNA: ENST00000555616.5

ACTN1-215, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 919 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-215ENST00000555616 CLTCL1P53675 1640 aa14.42□□□□□ -0.1
ACTN1-215ENST00000555616 DISP3Q9P2K9 1392 aa14.41□□□□□ -0.1
ACTN1-215ENST00000555616 ALKQ9UM73 1620 aa14.41□□□□□ -0.1
ACTN1-215ENST00000555616 DIP2AQ14689 1571 aa14.4□□□□□ -0.1
ACTN1-215ENST00000555616 NKTRP30414 1462 aaKnown RBP14.4□□□□□ -0.1
ACTN1-215ENST00000555616 UBAP1LF5GYI3 381 aa14.4□□□□□ -0.1
ACTN1-215ENST00000555616 CHGAP10645 457 aaKnown RBP14.39□□□□□ -0.11
ACTN1-215ENST00000555616 HDGFP51858 240 aaKnown RBP14.39□□□□□ -0.11
ACTN1-215ENST00000555616 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.39□□□□□ -0.11
ACTN1-215ENST00000555616 TRIM52Q96A61 297 aa14.39□□□□□ -0.11
ACTN1-215ENST00000555616 SOCS7O14512 581 aa14.38□□□□□ -0.11
ACTN1-215ENST00000555616 PPP1R15AO75807 674 aaPredicted RBP14.38□□□□□ -0.11
ACTN1-215ENST00000555616 SLC26A8Q96RN1 970 aa14.38□□□□□ -0.11
ACTN1-215ENST00000555616 ADAMTS13Q76LX8 1427 aa14.38□□□□□ -0.11
ACTN1-215ENST00000555616 SLC4A1APQ9BWU0 796 aaKnown RBP14.37□□□□□ -0.11
ACTN1-215ENST00000555616 NEXMIFQ5QGS0 1516 aa14.36□□□□□ -0.11
ACTN1-215ENST00000555616 SETBP1Q9Y6X0 1596 aa14.36□□□□□ -0.11
ACTN1-215ENST00000555616 SETD5Q9C0A6 1442 aa14.36□□□□□ -0.11
ACTN1-215ENST00000555616 KCNA6P17658 529 aa14.36□□□□□ -0.11
ACTN1-215ENST00000555616 NRXN3Q9Y4C0 1643 aa14.35□□□□□ -0.11
ACTN1-215ENST00000555616 ILDR2Q71H61 639 aa14.35□□□□□ -0.11
ACTN1-215ENST00000555616 PCGF6Q9BYE7 350 aa14.35□□□□□ -0.11
ACTN1-215ENST00000555616 XIRP1Q702N8 1843 aaKnown RBP14.35□□□□□ -0.11
ACTN1-215ENST00000555616 ACIN1Q9UKV3 1341 aaKnown RBP14.35□□□□□ -0.11
ACTN1-215ENST00000555616 TOM1O60784 492 aa14.34□□□□□ -0.11
ACTN1-215ENST00000555616 TBX22Q9Y458 520 aa14.34□□□□□ -0.11
ACTN1-215ENST00000555616 TMEM94Q12767 1356 aa14.34□□□□□ -0.11
ACTN1-215ENST00000555616 PIK3R4Q99570 1358 aa14.34□□□□□ -0.11
ACTN1-215ENST00000555616 BCANQ96GW7 911 aa14.33□□□□□ -0.12
ACTN1-215ENST00000555616 CHD2O14647 1828 aaKnown RBP14.32□□□□□ -0.12
ACTN1-215ENST00000555616 KIF1BO60333 1816 aa14.32□□□□□ -0.12
ACTN1-215ENST00000555616 NUTM2DQ5VT03 806 aaPredicted RBP14.32□□□□□ -0.12
ACTN1-215ENST00000555616 RAB3GAP2Q9H2M9 1393 aa14.31□□□□□ -0.12
ACTN1-215ENST00000555616 MPHOSPH9Q99550 1183 aa14.3□□□□□ -0.12
ACTN1-215ENST00000555616 CCDC144AA2RUR9 1427 aa14.3□□□□□ -0.12
ACTN1-215ENST00000555616 XRN1Q8IZH2 1706 aaKnown RBP14.29□□□□□ -0.12
ACTN1-215ENST00000555616 ZNF326Q5BKZ1 582 aaKnown RBP14.29□□□□□ -0.12
ACTN1-215ENST00000555616 SENP3Q9H4L4 574 aaPredicted RBP14.29□□□□□ -0.12
ACTN1-215ENST00000555616 PIP4K2BP78356 416 aa14.28□□□□□ -0.12
ACTN1-215ENST00000555616 FOXD1Q16676 465 aa14.28□□□□□ -0.12
ACTN1-215ENST00000555616 SPATA31E1Q6ZUB1 1445 aa14.28□□□□□ -0.12
ACTN1-215ENST00000555616 NCOA3Q9Y6Q9 1424 aa14.28□□□□□ -0.12
ACTN1-215ENST00000555616 PTPRUQ92729 1446 aa14.27□□□□□ -0.12
ACTN1-215ENST00000555616 SCAF1Q9H7N4 1312 aaKnown RBP14.27□□□□□ -0.12
ACTN1-215ENST00000555616 PROSER2Q86WR7 435 aaPredicted RBP14.27□□□□□ -0.13
ACTN1-215ENST00000555616 RPGRIP1LQ68CZ1 1315 aa14.26□□□□□ -0.13
ACTN1-215ENST00000555616 PPLO60437 1756 aa14.26□□□□□ -0.13
ACTN1-215ENST00000555616 MSH6P52701 1360 aa14.25□□□□□ -0.13
ACTN1-215ENST00000555616 HSPA1LP34931 641 aa14.25□□□□□ -0.13
ACTN1-215ENST00000555616 MED1Q15648 1581 aaPredicted RBP14.25□□□□□ -0.13
ACTN1-215ENST00000555616 PRAG1Q86YV5 1406 aa14.24□□□□□ -0.13
ACTN1-215ENST00000555616 SETD1AO15047 1707 aaKnown RBP14.24□□□□□ -0.13
ACTN1-215ENST00000555616 METP08581 1390 aa14.24□□□□□ -0.13
ACTN1-215ENST00000555616 RBM33Q96EV2 1170 aaKnown RBP14.23□□□□□ -0.13
ACTN1-215ENST00000555616 IFT172Q9UG01 1749 aa14.23□□□□□ -0.13
ACTN1-215ENST00000555616 FAM135BQ49AJ0 1406 aa14.23□□□□□ -0.13
ACTN1-215ENST00000555616 VGFO15240 615 aaPredicted RBP14.22□□□□□ -0.13
ACTN1-215ENST00000555616 HRCP23327 699 aa14.22□□□□□ -0.13
ACTN1-215ENST00000555616 AMOTL2Q9Y2J4 779 aa14.21□□□□□ -0.13
ACTN1-215ENST00000555616 DCCP43146 1447 aa14.21□□□□□ -0.13
ACTN1-215ENST00000555616 PTCH1Q13635 1447 aa14.21□□□□□ -0.13
ACTN1-215ENST00000555616 ANKRD30BQ9BXX2 1392 aa14.21□□□□□ -0.14
ACTN1-215ENST00000555616 ROBO1Q9Y6N7 1651 aa14.2□□□□□ -0.14
ACTN1-215ENST00000555616 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.18□□□□□ -0.14
ACTN1-215ENST00000555616 PIK3C2GO75747 1445 aa14.18□□□□□ -0.14
ACTN1-215ENST00000555616 MYOM2P54296 1465 aa14.18□□□□□ -0.14
ACTN1-215ENST00000555616 ADGRL3Q9HAR2 1447 aa14.17□□□□□ -0.14
ACTN1-215ENST00000555616 NRXN1Q9ULB1 1477 aa14.17□□□□□ -0.14
ACTN1-215ENST00000555616 ADGRF5Q8IZF2 1346 aa14.16□□□□□ -0.14
ACTN1-215ENST00000555616 C19orf44Q9H6X5 657 aa14.16□□□□□ -0.14
ACTN1-215ENST00000555616 ASXL1Q8IXJ9 1541 aa14.15□□□□□ -0.14
ACTN1-215ENST00000555616 C14orf37Q86TY3 774 aa14.15□□□□□ -0.14
ACTN1-215ENST00000555616 CADPS2Q86UW7 1296 aa14.15□□□□□ -0.14
ACTN1-215ENST00000555616 SLAIN2Q9P270 581 aa14.15□□□□□ -0.14
ACTN1-215ENST00000555616 NALCNQ8IZF0 1738 aa14.15□□□□□ -0.14
ACTN1-215ENST00000555616 ROBO2Q9HCK4 1378 aa14.14□□□□□ -0.15
ACTN1-215ENST00000555616 RGL3Q3MIN7 710 aa14.14□□□□□ -0.15
ACTN1-215ENST00000555616 TECPR2O15040 1411 aa14.14□□□□□ -0.15
ACTN1-215ENST00000555616 LAMC1P11047 1609 aa14.13□□□□□ -0.15
ACTN1-215ENST00000555616 AHDC1Q5TGY3 1603 aaPredicted RBP14.12□□□□□ -0.15
ACTN1-215ENST00000555616 ATF3P18847 181 aa14.12□□□□□ -0.15
ACTN1-215ENST00000555616 MST1RQ04912 1400 aa14.12□□□□□ -0.15
ACTN1-215ENST00000555616 KNDC1Q76NI1 1749 aa14.11□□□□□ -0.15
ACTN1-215ENST00000555616 COL16A1Q07092 1604 aaPredicted RBP14.11□□□□□ -0.15
ACTN1-215ENST00000555616 LRPPRCP42704 1394 aaKnown RBP14.1□□□□□ -0.15
ACTN1-215ENST00000555616 CDC42BPGQ6DT37 1551 aa14.09□□□□□ -0.15
ACTN1-215ENST00000555616 PHLPP1O60346 1717 aa14.09□□□□□ -0.15
ACTN1-215ENST00000555616 ABCC11Q96J66 1382 aa14.08□□□□□ -0.16
ACTN1-215ENST00000555616 YTHDC2Q9H6S0 1430 aaKnown RBP14.07□□□□□ -0.16
ACTN1-215ENST00000555616 BRINP3Q76B58 766 aa14.06□□□□□ -0.16
ACTN1-215ENST00000555616 C14orf93Q9H972 538 aaKnown RBP14.06□□□□□ -0.16
ACTN1-215ENST00000555616 ADGRB1O14514 1584 aa14.05□□□□□ -0.16
ACTN1-215ENST00000555616 NHSL1Q5SYE7 1610 aa14.05□□□□□ -0.16
ACTN1-215ENST00000555616 C1orf167Q5SNV9 1468 aa14.05□□□□□ -0.16
ACTN1-215ENST00000555616 DHX57Q6P158 1386 aaKnown RBP14.04□□□□□ -0.16
ACTN1-215ENST00000555616 JCADQ9P266 1359 aa14.04□□□□□ -0.16
ACTN1-215ENST00000555616 TMEM132EQ6IEE7 984 aa14.03□□□□□ -0.16
ACTN1-215ENST00000555616 STAC3Q96MF2 364 aa14.03□□□□□ -0.16
ACTN1-215ENST00000555616 DLC1Q96QB1 1528 aa14.03□□□□□ -0.16
ACTN1-215ENST00000555616 SHPRHQ149N8 1683 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms