RNA–Protein interactions for RNA: ENST00000555379.1

LINC00641-201, long intergenic non-protein coding RNA 641, humanhuman

Gene LINC00641, Length 5,425 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00641-201ENST00000555379 EPRSP07814 1512 aaKnown RBP10.49□□□□□ -0.73
LINC00641-201ENST00000555379 HSP90AB4PQ58FF6 505 aa10.49□□□□□ -0.73
LINC00641-201ENST00000555379 HSP90AB1P08238 724 aaKnown RBP10.48□□□□□ -0.73
LINC00641-201ENST00000555379 CCDC7Q96M83 1385 aa10.48□□□□□ -0.73
LINC00641-201ENST00000555379 E9PSI1 815 aa10.47□□□□□ -0.73
LINC00641-201ENST00000555379 RAPGEF4Q8WZA2 1011 aa10.47□□□□□ -0.73
LINC00641-201ENST00000555379 API5Q9BZZ5 524 aaKnown RBP10.47□□□□□ -0.73
LINC00641-201ENST00000555379 MSNP26038 577 aaKnown RBP10.46□□□□□ -0.73
LINC00641-201ENST00000555379 USP47Q96K76 1375 aa10.46□□□□□ -0.73
LINC00641-201ENST00000555379 GNL2Q13823 731 aaKnown RBP10.46□□□□□ -0.74
LINC00641-201ENST00000555379 PNISRQ8TF01 805 aaKnown RBP10.46□□□□□ -0.74
LINC00641-201ENST00000555379 PTMAP06454 111 aaKnown RBP10.45□□□□□ -0.74
LINC00641-201ENST00000555379 SYAP1Q96A49 352 aaPredicted RBP10.45□□□□□ -0.74
LINC00641-201ENST00000555379 TRAK1Q9UPV9 953 aa10.45□□□□□ -0.74
LINC00641-201ENST00000555379 ATAD2Q6PL18 1390 aa10.45□□□□□ -0.74
LINC00641-201ENST00000555379 DIAPH1O60610 1272 aaKnown RBP10.45□□□□□ -0.74
LINC00641-201ENST00000555379 TPM4P67936 248 aa10.45□□□□□ -0.74
LINC00641-201ENST00000555379 HOMEZQ8IX15 550 aa10.45□□□□□ -0.74
LINC00641-201ENST00000555379 NESP48681 1621 aa10.44□□□□□ -0.74
LINC00641-201ENST00000555379 LRPPRCP42704 1394 aaKnown RBP10.44□□□□□ -0.74
LINC00641-201ENST00000555379 CD109Q6YHK3 1445 aa10.44□□□□□ -0.74
LINC00641-201ENST00000555379 GAS2L2Q8NHY3 880 aa10.44□□□□□ -0.74
LINC00641-201ENST00000555379 USP35Q9P2H5 1018 aa10.44□□□□□ -0.74
LINC00641-201ENST00000555379 RUFY2Q8WXA3 655 aa10.43□□□□□ -0.74
LINC00641-201ENST00000555379 RCAN3Q9UKA8 241 aa10.43□□□□□ -0.74
LINC00641-201ENST00000555379 KIAA1107Q9UPP5 1409 aa10.43□□□□□ -0.74
LINC00641-201ENST00000555379 TCERG1O14776 1098 aaKnown RBP10.43□□□□□ -0.74
LINC00641-201ENST00000555379 SOX12O15370 315 aa10.43□□□□□ -0.74
LINC00641-201ENST00000555379 GNAI1P63096 354 aa10.43□□□□□ -0.74
LINC00641-201ENST00000555379 BIVM-ERCC5R4GMW8 1640 aa10.43□□□□□ -0.74
LINC00641-201ENST00000555379 KIAA2012Q0VF49 1180 aa10.43□□□□□ -0.74
LINC00641-201ENST00000555379 TIAM1Q13009 1591 aa10.42□□□□□ -0.74
LINC00641-201ENST00000555379 SF3B2Q13435 895 aaKnown RBP10.42□□□□□ -0.74
LINC00641-201ENST00000555379 DENND4BO75064 1496 aaPredicted RBP10.42□□□□□ -0.74
LINC00641-201ENST00000555379 SENP3Q9H4L4 574 aaPredicted RBP10.42□□□□□ -0.74
LINC00641-201ENST00000555379 TXNDC2Q86VQ3 553 aa10.42□□□□□ -0.74
LINC00641-201ENST00000555379 HIRIP3Q9BW71 556 aaPredicted RBP10.42□□□□□ -0.74
LINC00641-201ENST00000555379 CPLX2Q6PUV4 134 aaKnown RBP10.41□□□□□ -0.74
LINC00641-201ENST00000555379 KIF16BQ96L93 1317 aa10.41□□□□□ -0.74
LINC00641-201ENST00000555379 GBP4Q96PP9 640 aa10.41□□□□□ -0.74
LINC00641-201ENST00000555379 PROSER2Q86WR7 435 aaPredicted RBP10.41□□□□□ -0.74
LINC00641-201ENST00000555379 SUPT16HQ9Y5B9 1047 aaKnown RBP10.41□□□□□ -0.74
LINC00641-201ENST00000555379 ITPRIPQ8IWB1 547 aa10.41□□□□□ -0.74
LINC00641-201ENST00000555379 HMGB1P09429 215 aaKnown RBP10.4□□□□□ -0.74
LINC00641-201ENST00000555379 PLEKHO1Q53GL0 409 aaPredicted RBP10.4□□□□□ -0.74
LINC00641-201ENST00000555379 RBM19Q9Y4C8 960 aaKnown RBP10.4□□□□□ -0.74
LINC00641-201ENST00000555379 NINLQ9Y2I6 1382 aa10.39□□□□□ -0.75
LINC00641-201ENST00000555379 CT47B1P0C2W7 299 aaPredicted RBP10.39□□□□□ -0.75
LINC00641-201ENST00000555379 TRIM34Q9BYJ4 488 aa10.39□□□□□ -0.75
LINC00641-201ENST00000555379 FRAT2O75474 233 aaPredicted RBP10.38□□□□□ -0.75
LINC00641-201ENST00000555379 MFAP1P55081 439 aaKnown RBP10.38□□□□□ -0.75
LINC00641-201ENST00000555379 SETQ01105 290 aaPredicted RBP10.38□□□□□ -0.75
LINC00641-201ENST00000555379 ZKSCAN2Q63HK3 967 aa10.38□□□□□ -0.75
LINC00641-201ENST00000555379 NAP1L2Q9ULW6 460 aaPredicted RBP10.38□□□□□ -0.75
LINC00641-201ENST00000555379 ADGRL1O94910 1474 aa10.38□□□□□ -0.75
LINC00641-201ENST00000555379 RUSC2Q8N2Y8 1516 aa10.37□□□□□ -0.75
LINC00641-201ENST00000555379 KCNH5Q8NCM2 988 aa10.37□□□□□ -0.75
LINC00641-201ENST00000555379 RUNDC1Q96C34 613 aa10.37□□□□□ -0.75
LINC00641-201ENST00000555379 ATP6V1DQ9Y5K8 247 aa10.37□□□□□ -0.75
LINC00641-201ENST00000555379 SYNE3Q6ZMZ3 975 aa10.37□□□□□ -0.75
LINC00641-201ENST00000555379 ISY1Q9ULR0 285 aaKnown RBP10.37□□□□□ -0.75
LINC00641-201ENST00000555379 MINK1Q8N4C8 1332 aaPredicted RBP10.37□□□□□ -0.75
LINC00641-201ENST00000555379 GOLGA6L3A6NEY3 463 aa10.37□□□□□ -0.75
LINC00641-201ENST00000555379 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.37□□□□□ -0.752e-7■■■□□ 16
LINC00641-201ENST00000555379 DDX19BQ9UMR2 479 aa10.37□□□□□ -0.75
LINC00641-201ENST00000555379 ST20-MTHFSA0A0A6YYL1 179 aa10.36□□□□□ -0.75
LINC00641-201ENST00000555379 PANK3Q9H999 370 aa10.36□□□□□ -0.75
LINC00641-201ENST00000555379 CHMP3Q9Y3E7 222 aa10.36□□□□□ -0.75
LINC00641-201ENST00000555379 ZNF330Q9Y3S2 320 aaPredicted RBP10.36□□□□□ -0.75
LINC00641-201ENST00000555379 ST18O60284 1047 aa10.35□□□□□ -0.75
LINC00641-201ENST00000555379 ZNF428Q96B54 188 aa10.35□□□□□ -0.75
LINC00641-201ENST00000555379 BRD4O60885 1362 aaPredicted RBP10.35□□□□□ -0.75
LINC00641-201ENST00000555379 TATP17735 454 aaPredicted RBP10.35□□□□□ -0.75
LINC00641-201ENST00000555379 SPG7Q9UQ90 795 aa10.35□□□□□ -0.75
LINC00641-201ENST00000555379 CTDP1Q9Y5B0 961 aaPredicted RBP10.35□□□□□ -0.75
LINC00641-201ENST00000555379 PHF14O94880 888 aa10.35□□□□□ -0.75
LINC00641-201ENST00000555379 ITSN2Q9NZM3 1697 aa10.35□□□□□ -0.75
LINC00641-201ENST00000555379 AKAP17AQ02040 695 aaKnown RBP10.34□□□□□ -0.75
LINC00641-201ENST00000555379 RNF20Q5VTR2 975 aa10.34□□□□□ -0.75
LINC00641-201ENST00000555379 CCDC47Q96A33 483 aaKnown RBP10.34□□□□□ -0.75
LINC00641-201ENST00000555379 ERC2O15083 957 aa10.33□□□□□ -0.76
LINC00641-201ENST00000555379 RTEL1-TNFRSF6BF6WH68 1400 aa10.33□□□□□ -0.76
LINC00641-201ENST00000555379 RGS3P49796 1198 aa10.33□□□□□ -0.76
LINC00641-201ENST00000555379 GOLGA6L1Q8N7Z2 621 aa10.33□□□□□ -0.76
LINC00641-201ENST00000555379 MAP7D2Q96T17 732 aa10.33□□□□□ -0.76
LINC00641-201ENST00000555379 PDIA4P13667 645 aaKnown RBP10.32□□□□□ -0.76
LINC00641-201ENST00000555379 TSHZ2Q9NRE2 1034 aa10.32□□□□□ -0.76
LINC00641-201ENST00000555379 ARAP1Q96P48 1450 aa10.32□□□□□ -0.76
LINC00641-201ENST00000555379 RBM33Q96EV2 1170 aaKnown RBP10.32□□□□□ -0.76
LINC00641-201ENST00000555379 CENPQQ7L2Z9 268 aaPredicted RBP10.32□□□□□ -0.76
LINC00641-201ENST00000555379 C9orf78Q9NZ63 289 aaPredicted RBP10.32□□□□□ -0.76
LINC00641-201ENST00000555379 HIP1O00291 1037 aa10.32□□□□□ -0.76
LINC00641-201ENST00000555379 REC8O95072 547 aa10.32□□□□□ -0.76
LINC00641-201ENST00000555379 ERC1Q8IUD2 1116 aa10.32□□□□□ -0.76
LINC00641-201ENST00000555379 KIF6Q6ZMV9 814 aa10.31□□□□□ -0.76
LINC00641-201ENST00000555379 LTV1Q96GA3 475 aaPredicted RBP10.31□□□□□ -0.76
LINC00641-201ENST00000555379 PHF23Q9BUL5 403 aaPredicted RBP10.31□□□□□ -0.76
LINC00641-201ENST00000555379 URB2Q14146 1524 aaKnown RBP10.31□□□□□ -0.76
LINC00641-201ENST00000555379 ZBED9Q6R2W3 1325 aa10.31□□□□□ -0.76
LINC00641-201ENST00000555379 MTERF4Q7Z6M4 381 aaKnown RBP10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms