RNA–Protein interactions for RNA: ENST00000554541.5

PSMA6-206, Transcript of proteasome subunit alpha 6, humanhuman

TSL 2

Gene PSMA6, Length 925 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA6-206ENST00000554541 XIRP1Q702N8 1843 aaKnown RBP17.57■□□□□ 0.4
PSMA6-206ENST00000554541 HDGFP51858 240 aaKnown RBP17.57■□□□□ 0.4
PSMA6-206ENST00000554541 SLC26A8Q96RN1 970 aa17.57■□□□□ 0.4
PSMA6-206ENST00000554541 KCNA6P17658 529 aa17.55■□□□□ 0.4
PSMA6-206ENST00000554541 NWD1Q149M9 1564 aa17.54■□□□□ 0.4
PSMA6-206ENST00000554541 CHGAP10645 457 aaKnown RBP17.54■□□□□ 0.4
PSMA6-206ENST00000554541 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.54■□□□□ 0.4
PSMA6-206ENST00000554541 PPP1R15AO75807 674 aaPredicted RBP17.53■□□□□ 0.4
PSMA6-206ENST00000554541 PIP4K2BP78356 416 aa17.53■□□□□ 0.4
PSMA6-206ENST00000554541 SCAF1Q9H7N4 1312 aaKnown RBP17.52■□□□□ 0.4
PSMA6-206ENST00000554541 NKTRP30414 1462 aaKnown RBP17.52■□□□□ 0.4
PSMA6-206ENST00000554541 BCANQ96GW7 911 aa17.51■□□□□ 0.39
PSMA6-206ENST00000554541 CHD2O14647 1828 aaKnown RBP17.51■□□□□ 0.39
PSMA6-206ENST00000554541 TRPM2O94759 1503 aa17.51■□□□□ 0.39
PSMA6-206ENST00000554541 TMEM94Q12767 1356 aa17.5■□□□□ 0.39
PSMA6-206ENST00000554541 ADAMTS13Q76LX8 1427 aa17.49■□□□□ 0.39
PSMA6-206ENST00000554541 HSPA1LP34931 641 aa17.49■□□□□ 0.39
PSMA6-206ENST00000554541 TBX22Q9Y458 520 aa17.49■□□□□ 0.39
PSMA6-206ENST00000554541 CLTCL1P53675 1640 aa17.49■□□□□ 0.39
PSMA6-206ENST00000554541 DIP2AQ14689 1571 aa17.49■□□□□ 0.39
PSMA6-206ENST00000554541 DISP3Q9P2K9 1392 aa17.47■□□□□ 0.39
PSMA6-206ENST00000554541 NUTM2DQ5VT03 806 aaPredicted RBP17.46■□□□□ 0.39
PSMA6-206ENST00000554541 PROSER2Q86WR7 435 aaPredicted RBP17.46■□□□□ 0.39
PSMA6-206ENST00000554541 TRIM52Q96A61 297 aa17.46■□□□□ 0.39
PSMA6-206ENST00000554541 PIK3R4Q99570 1358 aa17.45■□□□□ 0.38
PSMA6-206ENST00000554541 SENP3Q9H4L4 574 aaPredicted RBP17.45■□□□□ 0.38
PSMA6-206ENST00000554541 KIF1BO60333 1816 aa17.44■□□□□ 0.38
PSMA6-206ENST00000554541 SETBP1Q9Y6X0 1596 aa17.44■□□□□ 0.38
PSMA6-206ENST00000554541 NRXN3Q9Y4C0 1643 aa17.43■□□□□ 0.38
PSMA6-206ENST00000554541 SLC4A1APQ9BWU0 796 aaKnown RBP17.43■□□□□ 0.38
PSMA6-206ENST00000554541 NEXMIFQ5QGS0 1516 aa17.42■□□□□ 0.38
PSMA6-206ENST00000554541 ZNF326Q5BKZ1 582 aaKnown RBP17.41■□□□□ 0.38
PSMA6-206ENST00000554541 RBM33Q96EV2 1170 aaKnown RBP17.41■□□□□ 0.38
PSMA6-206ENST00000554541 FAM135BQ49AJ0 1406 aa17.4■□□□□ 0.38
PSMA6-206ENST00000554541 NCOA3Q9Y6Q9 1424 aa17.4■□□□□ 0.38
PSMA6-206ENST00000554541 MSH6P52701 1360 aa17.4■□□□□ 0.38
PSMA6-206ENST00000554541 PTPRUQ92729 1446 aa17.37■□□□□ 0.37
PSMA6-206ENST00000554541 MED1Q15648 1581 aaPredicted RBP17.36■□□□□ 0.37
PSMA6-206ENST00000554541 XRN1Q8IZH2 1706 aaKnown RBP17.36■□□□□ 0.37
PSMA6-206ENST00000554541 ACIN1Q9UKV3 1341 aaKnown RBP17.36■□□□□ 0.37
PSMA6-206ENST00000554541 ROBO1Q9Y6N7 1651 aa17.36■□□□□ 0.37
PSMA6-206ENST00000554541 AMOTL2Q9Y2J4 779 aa17.35■□□□□ 0.37
PSMA6-206ENST00000554541 FOXD1Q16676 465 aa17.34■□□□□ 0.37
PSMA6-206ENST00000554541 RPGRIP1LQ68CZ1 1315 aa17.34■□□□□ 0.37
PSMA6-206ENST00000554541 ILDR2Q71H61 639 aa17.34■□□□□ 0.37
PSMA6-206ENST00000554541 MPHOSPH9Q99550 1183 aa17.34■□□□□ 0.37
PSMA6-206ENST00000554541 SETD5Q9C0A6 1442 aa17.34■□□□□ 0.37
PSMA6-206ENST00000554541 METP08581 1390 aa17.33■□□□□ 0.36
PSMA6-206ENST00000554541 SLAIN2Q9P270 581 aa17.33■□□□□ 0.36
PSMA6-206ENST00000554541 PPLO60437 1756 aa17.33■□□□□ 0.36
PSMA6-206ENST00000554541 VGFO15240 615 aaPredicted RBP17.32■□□□□ 0.36
PSMA6-206ENST00000554541 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.32■□□□□ 0.36
PSMA6-206ENST00000554541 CCDC144AA2RUR9 1427 aa17.31■□□□□ 0.36
PSMA6-206ENST00000554541 C19orf44Q9H6X5 657 aa17.31■□□□□ 0.36
PSMA6-206ENST00000554541 SETD1AO15047 1707 aaKnown RBP17.3■□□□□ 0.36
PSMA6-206ENST00000554541 C14orf37Q86TY3 774 aa17.29■□□□□ 0.36
PSMA6-206ENST00000554541 CADPS2Q86UW7 1296 aa17.29■□□□□ 0.36
PSMA6-206ENST00000554541 DCCP43146 1447 aa17.28■□□□□ 0.36
PSMA6-206ENST00000554541 SPATA31E1Q6ZUB1 1445 aa17.28■□□□□ 0.36
PSMA6-206ENST00000554541 RAB3GAP2Q9H2M9 1393 aa17.27■□□□□ 0.35
PSMA6-206ENST00000554541 IFT172Q9UG01 1749 aa17.25■□□□□ 0.35
PSMA6-206ENST00000554541 PRAG1Q86YV5 1406 aa17.25■□□□□ 0.35
PSMA6-206ENST00000554541 ATF3P18847 181 aa17.25■□□□□ 0.35
PSMA6-206ENST00000554541 PHLPP1O60346 1717 aa17.24■□□□□ 0.35
PSMA6-206ENST00000554541 PTCH1Q13635 1447 aa17.23■□□□□ 0.35
PSMA6-206ENST00000554541 ANKRD30BQ9BXX2 1392 aa17.23■□□□□ 0.35
PSMA6-206ENST00000554541 ADGRL3Q9HAR2 1447 aa17.22■□□□□ 0.35
PSMA6-206ENST00000554541 COL16A1Q07092 1604 aaPredicted RBP17.21■□□□□ 0.35
PSMA6-206ENST00000554541 NALCNQ8IZF0 1738 aa17.21■□□□□ 0.35
PSMA6-206ENST00000554541 SOCS7O14512 581 aa17.21■□□□□ 0.35
PSMA6-206ENST00000554541 AHDC1Q5TGY3 1603 aaPredicted RBP17.21■□□□□ 0.35
PSMA6-206ENST00000554541 ADGRF5Q8IZF2 1346 aa17.21■□□□□ 0.34
PSMA6-206ENST00000554541 RGL3Q3MIN7 710 aa17.2■□□□□ 0.34
PSMA6-206ENST00000554541 MST1RQ04912 1400 aa17.2■□□□□ 0.34
PSMA6-206ENST00000554541 ROBO2Q9HCK4 1378 aa17.19■□□□□ 0.34
PSMA6-206ENST00000554541 HRCP23327 699 aa17.19■□□□□ 0.34
PSMA6-206ENST00000554541 PHF23Q9BUL5 403 aaPredicted RBP17.19■□□□□ 0.34
PSMA6-206ENST00000554541 BRINP3Q76B58 766 aa17.18■□□□□ 0.34
PSMA6-206ENST00000554541 JCADQ9P266 1359 aa17.17■□□□□ 0.34
PSMA6-206ENST00000554541 PIK3C2GO75747 1445 aa17.17■□□□□ 0.34
PSMA6-206ENST00000554541 ASXL1Q8IXJ9 1541 aa17.16■□□□□ 0.34
PSMA6-206ENST00000554541 TECPR2O15040 1411 aa17.14■□□□□ 0.33
PSMA6-206ENST00000554541 MYOM2P54296 1465 aa17.14■□□□□ 0.33
PSMA6-206ENST00000554541 NRXN1Q9ULB1 1477 aa17.14■□□□□ 0.33
PSMA6-206ENST00000554541 NHSL1Q5SYE7 1610 aa17.14■□□□□ 0.33
PSMA6-206ENST00000554541 RGS17Q9UGC6 210 aaPredicted RBP17.13■□□□□ 0.33
PSMA6-206ENST00000554541 SHPRHQ149N8 1683 aa17.13■□□□□ 0.33
PSMA6-206ENST00000554541 KNDC1Q76NI1 1749 aa17.12■□□□□ 0.33
PSMA6-206ENST00000554541 LRPPRCP42704 1394 aaKnown RBP17.12■□□□□ 0.33
PSMA6-206ENST00000554541 C1orf167Q5SNV9 1468 aa17.12■□□□□ 0.33
PSMA6-206ENST00000554541 ABCC11Q96J66 1382 aa17.11■□□□□ 0.33
PSMA6-206ENST00000554541 SPATA31A6Q5VVP1 1343 aa17.1■□□□□ 0.33
PSMA6-206ENST00000554541 CDC42BPGQ6DT37 1551 aa17.1■□□□□ 0.33
PSMA6-206ENST00000554541 LAMC1P11047 1609 aa17.1■□□□□ 0.33
PSMA6-206ENST00000554541 C14orf93Q9H972 538 aaKnown RBP17.09■□□□□ 0.33
PSMA6-206ENST00000554541 YTHDC2Q9H6S0 1430 aaKnown RBP17.08■□□□□ 0.32
PSMA6-206ENST00000554541 TMEM132EQ6IEE7 984 aa17.08■□□□□ 0.32
PSMA6-206ENST00000554541 STK26Q9P289 416 aa17.07■□□□□ 0.32
PSMA6-206ENST00000554541 LRP6O75581 1613 aa17.07■□□□□ 0.32
PSMA6-206ENST00000554541 WAPLQ7Z5K2 1190 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms