RNA–Protein interactions for RNA: ENST00000554534.5

PCNX4-208, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 357 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-208ENST00000554534 FGD6Q6ZV73 1430 aa10.46□□□□□ -0.74
PCNX4-208ENST00000554534 MAP3K1Q13233 1512 aa10.46□□□□□ -0.74
PCNX4-208ENST00000554534 PHLPP1O60346 1717 aa10.45□□□□□ -0.74
PCNX4-208ENST00000554534 ANKRD30AQ9BXX3 1397 aa10.45□□□□□ -0.74
PCNX4-208ENST00000554534 ITGAEP38570 1179 aa10.45□□□□□ -0.74
PCNX4-208ENST00000554534 TRIM52Q96A61 297 aa10.45□□□□□ -0.74
PCNX4-208ENST00000554534 NUTM2BA6NNL0 878 aaPredicted RBP10.44□□□□□ -0.74
PCNX4-208ENST00000554534 NUTM2EB1AL46 878 aaPredicted RBP10.44□□□□□ -0.74
PCNX4-208ENST00000554534 NUTM2AQ8IVF1 878 aaPredicted RBP10.44□□□□□ -0.74
PCNX4-208ENST00000554534 NOS1P29475 1434 aa10.43□□□□□ -0.74
PCNX4-208ENST00000554534 MSH6P52701 1360 aa10.43□□□□□ -0.74
PCNX4-208ENST00000554534 GCC2Q8IWJ2 1684 aa10.43□□□□□ -0.74
PCNX4-208ENST00000554534 RIMS2Q9UQ26 1411 aa10.42□□□□□ -0.74
PCNX4-208ENST00000554534 MEX3CQ5U5Q3 659 aaKnown RBP10.42□□□□□ -0.74
PCNX4-208ENST00000554534 ADGRB3O60242 1522 aa10.42□□□□□ -0.74
PCNX4-208ENST00000554534 CHD2O14647 1828 aaKnown RBP10.42□□□□□ -0.74
PCNX4-208ENST00000554534 DDX17Q92841 729 aaKnown RBP10.41□□□□□ -0.74
PCNX4-208ENST00000554534 SLC52A1Q9NWF4 448 aa10.41□□□□□ -0.74
PCNX4-208ENST00000554534 LMTK2Q8IWU2 1503 aa10.4□□□□□ -0.74
PCNX4-208ENST00000554534 LRP6O75581 1613 aa10.4□□□□□ -0.75
PCNX4-208ENST00000554534 ZFYVE9O95405 1425 aa10.39□□□□□ -0.75
PCNX4-208ENST00000554534 ANKRD50Q9ULJ7 1429 aa10.39□□□□□ -0.75
PCNX4-208ENST00000554534 JCADQ9P266 1359 aa10.39□□□□□ -0.75
PCNX4-208ENST00000554534 TMEM131LA2VDJ0 1609 aa10.38□□□□□ -0.75
PCNX4-208ENST00000554534 AMOTL2Q9Y2J4 779 aa10.38□□□□□ -0.75
PCNX4-208ENST00000554534 NWD1Q149M9 1564 aa10.38□□□□□ -0.75
PCNX4-208ENST00000554534 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.38□□□□□ -0.75
PCNX4-208ENST00000554534 PLEKHG1Q9ULL1 1385 aa10.38□□□□□ -0.75
PCNX4-208ENST00000554534 KDM5AP29375 1690 aaKnown RBP10.38□□□□□ -0.75
PCNX4-208ENST00000554534 ATF3P18847 181 aa10.37□□□□□ -0.75
PCNX4-208ENST00000554534 PTPRUQ92729 1446 aa10.37□□□□□ -0.75
PCNX4-208ENST00000554534 UPF1Q92900 1129 aaKnown RBP eCLIP10.37□□□□□ -0.75
PCNX4-208ENST00000554534 TBX22Q9Y458 520 aa10.37□□□□□ -0.75
PCNX4-208ENST00000554534 E9PCH4 1651 aa10.37□□□□□ -0.75
PCNX4-208ENST00000554534 COL16A1Q07092 1604 aaPredicted RBP10.36□□□□□ -0.75
PCNX4-208ENST00000554534 ADAMTS13Q76LX8 1427 aa10.36□□□□□ -0.75
PCNX4-208ENST00000554534 NKTRP30414 1462 aaKnown RBP10.36□□□□□ -0.75
PCNX4-208ENST00000554534 HDGFP51858 240 aaKnown RBP10.35□□□□□ -0.75
PCNX4-208ENST00000554534 ZNF326Q5BKZ1 582 aaKnown RBP10.35□□□□□ -0.75
PCNX4-208ENST00000554534 BRINP3Q76B58 766 aa10.35□□□□□ -0.75
PCNX4-208ENST00000554534 C19orf44Q9H6X5 657 aa10.35□□□□□ -0.75
PCNX4-208ENST00000554534 ADGRL2O95490 1459 aa10.34□□□□□ -0.75
PCNX4-208ENST00000554534 RXRBP28702 533 aa10.33□□□□□ -0.76
PCNX4-208ENST00000554534 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.33□□□□□ -0.76
PCNX4-208ENST00000554534 NUP155O75694 1391 aa10.33□□□□□ -0.76
PCNX4-208ENST00000554534 AFF2P51816 1311 aa10.33□□□□□ -0.76
PCNX4-208ENST00000554534 ADAMTS2O95450 1211 aa10.32□□□□□ -0.76
PCNX4-208ENST00000554534 CADPS2Q86UW7 1296 aa10.32□□□□□ -0.76
PCNX4-208ENST00000554534 C8orf37Q96NL8 207 aa10.32□□□□□ -0.76
PCNX4-208ENST00000554534 ZNF772Q68DY9 489 aaPredicted RBP10.31□□□□□ -0.76
PCNX4-208ENST00000554534 RPRD2Q5VT52 1461 aaKnown RBP10.3□□□□□ -0.76
PCNX4-208ENST00000554534 METP08581 1390 aa10.3□□□□□ -0.76
PCNX4-208ENST00000554534 UNC13BO14795 1591 aa10.3□□□□□ -0.76
PCNX4-208ENST00000554534 SPATA31A6Q5VVP1 1343 aa10.3□□□□□ -0.76
PCNX4-208ENST00000554534 QTRT2Q9H974 415 aaKnown RBP10.29□□□□□ -0.76
PCNX4-208ENST00000554534 SHPRHQ149N8 1683 aa10.28□□□□□ -0.76
PCNX4-208ENST00000554534 DIP2AQ14689 1571 aa10.28□□□□□ -0.76
PCNX4-208ENST00000554534 ORAI2Q96SN7 254 aa10.28□□□□□ -0.76
PCNX4-208ENST00000554534 AHDC1Q5TGY3 1603 aaPredicted RBP10.28□□□□□ -0.76
PCNX4-208ENST00000554534 NRXN3Q9Y4C0 1643 aa10.28□□□□□ -0.76
PCNX4-208ENST00000554534 IQGAP3Q86VI3 1631 aa10.27□□□□□ -0.77
PCNX4-208ENST00000554534 NGLY1Q96IV0 654 aa10.27□□□□□ -0.77
PCNX4-208ENST00000554534 TRPM2O94759 1503 aa10.27□□□□□ -0.77
PCNX4-208ENST00000554534 MST1RQ04912 1400 aa10.26□□□□□ -0.77
PCNX4-208ENST00000554534 PLEKHG5O94827 1062 aa10.26□□□□□ -0.77
PCNX4-208ENST00000554534 ASXL1Q8IXJ9 1541 aa10.26□□□□□ -0.77
PCNX4-208ENST00000554534 NUTM2FA1L443 756 aa10.25□□□□□ -0.77
PCNX4-208ENST00000554534 XPCQ01831 940 aaPredicted RBP10.25□□□□□ -0.77
PCNX4-208ENST00000554534 LRRC59Q96AG4 307 aaKnown RBP10.25□□□□□ -0.77
PCNX4-208ENST00000554534 NCOA3Q9Y6Q9 1424 aa10.24□□□□□ -0.77
PCNX4-208ENST00000554534 PIK3R4Q99570 1358 aa10.24□□□□□ -0.77
PCNX4-208ENST00000554534 SPHKAPQ2M3C7 1700 aa10.24□□□□□ -0.77
PCNX4-208ENST00000554534 XRN1Q8IZH2 1706 aaKnown RBP10.24□□□□□ -0.77
PCNX4-208ENST00000554534 NHSL1Q5SYE7 1610 aa10.23□□□□□ -0.77
PCNX4-208ENST00000554534 FOXD1Q16676 465 aa10.23□□□□□ -0.77
PCNX4-208ENST00000554534 NALCNQ8IZF0 1738 aa10.23□□□□□ -0.77
PCNX4-208ENST00000554534 PNPLA6Q8IY17 1366 aa10.23□□□□□ -0.77
PCNX4-208ENST00000554534 RGS12O14924 1447 aa10.23□□□□□ -0.77
PCNX4-208ENST00000554534 CLTCL1P53675 1640 aa10.22□□□□□ -0.77
PCNX4-208ENST00000554534 RBM6P78332 1123 aaKnown RBP10.22□□□□□ -0.77
PCNX4-208ENST00000554534 ROCK1Q13464 1354 aa10.22□□□□□ -0.77
PCNX4-208ENST00000554534 STK26Q9P289 416 aa10.21□□□□□ -0.77
PCNX4-208ENST00000554534 USP21Q9UK80 565 aa10.21□□□□□ -0.77
PCNX4-208ENST00000554534 ROBO2Q9HCK4 1378 aa10.21□□□□□ -0.78
PCNX4-208ENST00000554534 SETD5Q9C0A6 1442 aa10.21□□□□□ -0.78
PCNX4-208ENST00000554534 C1orf167Q5SNV9 1468 aa10.2□□□□□ -0.78
PCNX4-208ENST00000554534 SETBP1Q9Y6X0 1596 aa10.2□□□□□ -0.78
PCNX4-208ENST00000554534 SRCAPQ6ZRS2 3230 aa10.19□□□□□ -0.78
PCNX4-208ENST00000554534 NEXMIFQ5QGS0 1516 aa10.19□□□□□ -0.78
PCNX4-208ENST00000554534 ADGRL3Q9HAR2 1447 aa10.19□□□□□ -0.78
PCNX4-208ENST00000554534 ESCO1Q5FWF5 840 aa10.19□□□□□ -0.78
PCNX4-208ENST00000554534 WAPLQ7Z5K2 1190 aa10.19□□□□□ -0.78
PCNX4-208ENST00000554534 KIF1BO60333 1816 aa10.19□□□□□ -0.78
PCNX4-208ENST00000554534 RGL3Q3MIN7 710 aa10.18□□□□□ -0.78
PCNX4-208ENST00000554534 FOXO3O43524 673 aa10.17□□□□□ -0.78
PCNX4-208ENST00000554534 TMEM132EQ6IEE7 984 aa10.17□□□□□ -0.78
PCNX4-208ENST00000554534 DCCP43146 1447 aa10.16□□□□□ -0.78
PCNX4-208ENST00000554534 SOS2Q07890 1332 aaPredicted RBP10.15□□□□□ -0.78
PCNX4-208ENST00000554534 SLC4A1APQ9BWU0 796 aaKnown RBP10.15□□□□□ -0.78
PCNX4-208ENST00000554534 CDK12Q9NYV4 1490 aaPredicted RBP10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms