RNA–Protein interactions for RNA: ENST00000553745.5

ABCD4-219, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 2

Gene ABCD4, Length 1,770 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-219ENST00000553745 PLPPR3Q6T4P5 718 aa19.95■□□□□ 0.78
ABCD4-219ENST00000553745 A2ML1A8K2U0 1454 aa19.94■□□□□ 0.78
ABCD4-219ENST00000553745 NLRP1Q9C000 1473 aa19.93■□□□□ 0.78
ABCD4-219ENST00000553745 NRXN1Q9ULB1 1477 aa19.93■□□□□ 0.78
ABCD4-219ENST00000553745 CENPBP07199 599 aaPredicted RBP19.92■□□□□ 0.78
ABCD4-219ENST00000553745 KIAA1210Q9ULL0 1709 aa19.92■□□□□ 0.78
ABCD4-219ENST00000553745 RPGRIP1LQ68CZ1 1315 aa19.9■□□□□ 0.78
ABCD4-219ENST00000553745 STAC3Q96MF2 364 aa19.9■□□□□ 0.78
ABCD4-219ENST00000553745 STAG3Q9UJ98 1225 aa19.9■□□□□ 0.78
ABCD4-219ENST00000553745 LAMC1P11047 1609 aa19.9■□□□□ 0.78
ABCD4-219ENST00000553745 ADGRF5Q8IZF2 1346 aa19.89■□□□□ 0.78
ABCD4-219ENST00000553745 PTPRMP28827 1452 aa19.88■□□□□ 0.77
ABCD4-219ENST00000553745 PIK3C2GO75747 1445 aa19.87■□□□□ 0.77
ABCD4-219ENST00000553745 ZNF142P52746 1687 aaPredicted RBP19.87■□□□□ 0.77
ABCD4-219ENST00000553745 ROCK2O75116 1388 aaKnown RBP19.87■□□□□ 0.77
ABCD4-219ENST00000553745 CEP170BQ9Y4F5 1589 aaPredicted RBP19.86■□□□□ 0.77
ABCD4-219ENST00000553745 NUTM2DQ5VT03 806 aaPredicted RBP19.85■□□□□ 0.77
ABCD4-219ENST00000553745 GPRASP1Q5JY77 1395 aa19.85■□□□□ 0.77
ABCD4-219ENST00000553745 ZFYVE9O95405 1425 aa19.84■□□□□ 0.77
ABCD4-219ENST00000553745 RIMS2Q9UQ26 1411 aa19.84■□□□□ 0.77
ABCD4-219ENST00000553745 NBPF1Q3BBV0 1214 aa19.83■□□□□ 0.77
ABCD4-219ENST00000553745 IQGAP1P46940 1657 aa19.83■□□□□ 0.76
ABCD4-219ENST00000553745 HIRIP3Q9BW71 556 aaPredicted RBP19.83■□□□□ 0.76
ABCD4-219ENST00000553745 SETD1BQ9UPS6 1966 aaKnown RBP19.82■□□□□ 0.76
ABCD4-219ENST00000553745 CARD11Q9BXL7 1154 aa19.82■□□□□ 0.76
ABCD4-219ENST00000553745 USP47Q96K76 1375 aa19.82■□□□□ 0.76
ABCD4-219ENST00000553745 HSPA5P11021 654 aaKnown RBP19.81■□□□□ 0.76
ABCD4-219ENST00000553745 VGFO15240 615 aaPredicted RBP19.8■□□□□ 0.76
ABCD4-219ENST00000553745 EIF4G2P78344 907 aaKnown RBP eCLIP19.8■□□□□ 0.76
ABCD4-219ENST00000553745 SETBP1Q9Y6X0 1596 aa19.79■□□□□ 0.76
ABCD4-219ENST00000553745 TMEM2Q9UHN6 1383 aa19.79■□□□□ 0.76
ABCD4-219ENST00000553745 SLIT1O75093 1534 aa19.78■□□□□ 0.76
ABCD4-219ENST00000553745 CFAP70Q5T0N1 1121 aa19.78■□□□□ 0.76
ABCD4-219ENST00000553745 NRXN3Q9Y4C0 1643 aa19.78■□□□□ 0.76
ABCD4-219ENST00000553745 SETD1AO15047 1707 aaKnown RBP19.77■□□□□ 0.76
ABCD4-219ENST00000553745 ADGRB1O14514 1584 aa19.77■□□□□ 0.76
ABCD4-219ENST00000553745 ARHGAP23Q9P227 1491 aa19.76■□□□□ 0.75
ABCD4-219ENST00000553745 POLR1AO95602 1720 aaPredicted RBP19.76■□□□□ 0.75
ABCD4-219ENST00000553745 ASXL1Q8IXJ9 1541 aa19.75■□□□□ 0.75
ABCD4-219ENST00000553745 ALKQ9UM73 1620 aa19.74■□□□□ 0.75
ABCD4-219ENST00000553745 KDM4FA0A1W2PPD8 638 aa19.74■□□□□ 0.75
ABCD4-219ENST00000553745 SENP3Q9H4L4 574 aaPredicted RBP19.74■□□□□ 0.75
ABCD4-219ENST00000553745 C14orf93Q9H972 538 aaKnown RBP19.74■□□□□ 0.75
ABCD4-219ENST00000553745 SCAF11Q99590 1463 aaKnown RBP19.73■□□□□ 0.75
ABCD4-219ENST00000553745 YTHDC1Q96MU7 727 aaKnown RBP19.73■□□□□ 0.75
ABCD4-219ENST00000553745 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.72■□□□□ 0.75
ABCD4-219ENST00000553745 THEMISQ8N1K5 641 aaPredicted RBP19.7■□□□□ 0.74
ABCD4-219ENST00000553745 ARHGEF28Q8N1W1 1705 aaKnown RBP19.69■□□□□ 0.74
ABCD4-219ENST00000553745 HDGFP51858 240 aaKnown RBP19.68■□□□□ 0.74
ABCD4-219ENST00000553745 ST20-MTHFSA0A0A6YYL1 179 aa19.67■□□□□ 0.74
ABCD4-219ENST00000553745 LTKP29376 864 aa19.67■□□□□ 0.74
ABCD4-219ENST00000553745 PLEKHG1Q9ULL1 1385 aa19.67■□□□□ 0.74
ABCD4-219ENST00000553745 TMEM132EQ6IEE7 984 aa19.67■□□□□ 0.74
ABCD4-219ENST00000553745 TXNDC2Q86VQ3 553 aa19.65■□□□□ 0.74
ABCD4-219ENST00000553745 GTF3C3Q9Y5Q9 886 aa19.65■□□□□ 0.74
ABCD4-219ENST00000553745 EIF3AQ14152 1382 aaKnown RBP19.65■□□□□ 0.74
ABCD4-219ENST00000553745 EID1Q9Y6B2 187 aa19.65■□□□□ 0.74
ABCD4-219ENST00000553745 QRICH2Q9H0J4 1663 aa19.64■□□□□ 0.73
ABCD4-219ENST00000553745 ADAMTS13Q76LX8 1427 aa19.63■□□□□ 0.73
ABCD4-219ENST00000553745 C11orf95C9JLR9 678 aaPredicted RBP19.62■□□□□ 0.73
ABCD4-219ENST00000553745 DDX10Q13206 875 aaKnown RBP19.62■□□□□ 0.73
ABCD4-219ENST00000553745 WASHC2AQ641Q2 1341 aa19.62■□□□□ 0.73
ABCD4-219ENST00000553745 YTHDC2Q9H6S0 1430 aaKnown RBP19.62■□□□□ 0.73
ABCD4-219ENST00000553745 KNDC1Q76NI1 1749 aa19.61■□□□□ 0.73
ABCD4-219ENST00000553745 DIP2AQ14689 1571 aa19.61■□□□□ 0.73
ABCD4-219ENST00000553745 TRAK1Q9UPV9 953 aa19.6■□□□□ 0.73
ABCD4-219ENST00000553745 MED14O60244 1454 aa19.6■□□□□ 0.73
ABCD4-219ENST00000553745 METP08581 1390 aa19.6■□□□□ 0.73
ABCD4-219ENST00000553745 CCDC7Q96M83 1385 aa19.6■□□□□ 0.73
ABCD4-219ENST00000553745 BCANQ96GW7 911 aa19.6■□□□□ 0.73
ABCD4-219ENST00000553745 TESK2Q96S53 571 aa19.59■□□□□ 0.73
ABCD4-219ENST00000553745 KIF7Q2M1P5 1343 aa19.58■□□□□ 0.73
ABCD4-219ENST00000553745 DLC1Q96QB1 1528 aa19.56■□□□□ 0.72
ABCD4-219ENST00000553745 STK26Q9P289 416 aa19.56■□□□□ 0.72
ABCD4-219ENST00000553745 LRPPRCP42704 1394 aaKnown RBP19.56■□□□□ 0.72
ABCD4-219ENST00000553745 DISP3Q9P2K9 1392 aa19.56■□□□□ 0.72
ABCD4-219ENST00000553745 LMTK3Q96Q04 1460 aa19.55■□□□□ 0.72
ABCD4-219ENST00000553745 ANKLE2Q86XL3 938 aa19.55■□□□□ 0.72
ABCD4-219ENST00000553745 CPS1P31327 1500 aa19.55■□□□□ 0.72
ABCD4-219ENST00000553745 CENPJQ9HC77 1338 aaPredicted RBP19.55■□□□□ 0.72
ABCD4-219ENST00000553745 SLC26A8Q96RN1 970 aa19.54■□□□□ 0.72
ABCD4-219ENST00000553745 SBNO2Q9Y2G9 1366 aa19.53■□□□□ 0.72
ABCD4-219ENST00000553745 NPHP4O75161 1426 aaPredicted RBP19.52■□□□□ 0.72
ABCD4-219ENST00000553745 TECPR2O15040 1411 aa19.51■□□□□ 0.71
ABCD4-219ENST00000553745 XRN1Q8IZH2 1706 aaKnown RBP19.51■□□□□ 0.71
ABCD4-219ENST00000553745 ABCC11Q96J66 1382 aa19.51■□□□□ 0.71
ABCD4-219ENST00000553745 PTPRUQ92729 1446 aa19.51■□□□□ 0.71
ABCD4-219ENST00000553745 TMF1P82094 1093 aa19.5■□□□□ 0.71
ABCD4-219ENST00000553745 POLR3GLQ9BT43 218 aa19.5■□□□□ 0.71
ABCD4-219ENST00000553745 TBX22Q9Y458 520 aa19.49■□□□□ 0.71
ABCD4-219ENST00000553745 TULP4Q9NRJ4 1543 aa19.49■□□□□ 0.71
ABCD4-219ENST00000553745 MYOM1P52179 1685 aa19.49■□□□□ 0.71
ABCD4-219ENST00000553745 NCKAP5LQ9HCH0 1330 aa19.49■□□□□ 0.71
ABCD4-219ENST00000553745 CHD2O14647 1828 aaKnown RBP19.48■□□□□ 0.71
ABCD4-219ENST00000553745 PRAM1Q96QH2 718 aa19.48■□□□□ 0.71
ABCD4-219ENST00000553745 HSPA2P54652 639 aa19.47■□□□□ 0.71
ABCD4-219ENST00000553745 SAFB2Q14151 953 aaKnown RBP eCLIP19.47■□□□□ 0.71
ABCD4-219ENST00000553745 PLEKHH1Q9ULM0 1364 aa19.46■□□□□ 0.71
ABCD4-219ENST00000553745 STRCQ7RTU9 1775 aa19.46■□□□□ 0.71
ABCD4-219ENST00000553745 FAM135BQ49AJ0 1406 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms