RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 PROSER2Q86WR7 435 aaPredicted RBP24.3■■□□□ 1.48
ACTN1-209ENST00000553659 BCANQ96GW7 911 aa24.26■■□□□ 1.47
ACTN1-209ENST00000553659 GCC2Q8IWJ2 1684 aa24.26■■□□□ 1.47
ACTN1-209ENST00000553659 NWD1Q149M9 1564 aa24.25■■□□□ 1.47
ACTN1-209ENST00000553659 NKTRP30414 1462 aaKnown RBP24.25■■□□□ 1.47
ACTN1-209ENST00000553659 HDGFP51858 240 aaKnown RBP24.24■■□□□ 1.47
ACTN1-209ENST00000553659 RBM33Q96EV2 1170 aaKnown RBP24.24■■□□□ 1.47
ACTN1-209ENST00000553659 CHD2O14647 1828 aaKnown RBP24.24■■□□□ 1.47
ACTN1-209ENST00000553659 ZFYVE9O95405 1425 aa24.23■■□□□ 1.47
ACTN1-209ENST00000553659 TMEM131LA2VDJ0 1609 aa24.23■■□□□ 1.47
ACTN1-209ENST00000553659 ROBO1Q9Y6N7 1651 aa24.23■■□□□ 1.47
ACTN1-209ENST00000553659 UNC13BO14795 1591 aa24.22■■□□□ 1.47
ACTN1-209ENST00000553659 PLEKHG1Q9ULL1 1385 aa24.21■■□□□ 1.47
ACTN1-209ENST00000553659 RGS17Q9UGC6 210 aaPredicted RBP24.2■■□□□ 1.46
ACTN1-209ENST00000553659 RIMS2Q9UQ26 1411 aa24.19■■□□□ 1.46
ACTN1-209ENST00000553659 E9PCH4 1651 aa24.18■■□□□ 1.46
ACTN1-209ENST00000553659 PPP1R15AO75807 674 aaPredicted RBP24.18■■□□□ 1.46
ACTN1-209ENST00000553659 MSH6P52701 1360 aa24.17■■□□□ 1.46
ACTN1-209ENST00000553659 ROCK1Q13464 1354 aa24.16■■□□□ 1.46
ACTN1-209ENST00000553659 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.15■■□□□ 1.46
ACTN1-209ENST00000553659 TBX22Q9Y458 520 aa24.15■■□□□ 1.46
ACTN1-209ENST00000553659 CHGAP10645 457 aaKnown RBP24.14■■□□□ 1.45
ACTN1-209ENST00000553659 SLAIN2Q9P270 581 aa24.14■■□□□ 1.45
ACTN1-209ENST00000553659 IQGAP3Q86VI3 1631 aa24.13■■□□□ 1.45
ACTN1-209ENST00000553659 PHLPP1O60346 1717 aa24.1■■□□□ 1.45
ACTN1-209ENST00000553659 NCOA3Q9Y6Q9 1424 aa24.1■■□□□ 1.45
ACTN1-209ENST00000553659 NUTM2DQ5VT03 806 aaPredicted RBP24.08■■□□□ 1.45
ACTN1-209ENST00000553659 ADAMTS13Q76LX8 1427 aa24.08■■□□□ 1.44
ACTN1-209ENST00000553659 NUP155O75694 1391 aa24.07■■□□□ 1.44
ACTN1-209ENST00000553659 DIP2AQ14689 1571 aa24.07■■□□□ 1.44
ACTN1-209ENST00000553659 HRCP23327 699 aa24.06■■□□□ 1.44
ACTN1-209ENST00000553659 PIK3R4Q99570 1358 aa24.05■■□□□ 1.44
ACTN1-209ENST00000553659 POTEAQ6S8J7 498 aa24.04■■□□□ 1.44
ACTN1-209ENST00000553659 ITGAEP38570 1179 aa24.03■■□□□ 1.44
ACTN1-209ENST00000553659 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.02■■□□□ 1.44
ACTN1-209ENST00000553659 C14orf37Q86TY3 774 aa24.02■■□□□ 1.44
ACTN1-209ENST00000553659 JCADQ9P266 1359 aa24.02■■□□□ 1.44
ACTN1-209ENST00000553659 C19orf44Q9H6X5 657 aa24.01■■□□□ 1.43
ACTN1-209ENST00000553659 CADPS2Q86UW7 1296 aa24■■□□□ 1.43
ACTN1-209ENST00000553659 TRPM2O94759 1503 aa24■■□□□ 1.43
ACTN1-209ENST00000553659 COL16A1Q07092 1604 aaPredicted RBP23.99■■□□□ 1.43
ACTN1-209ENST00000553659 SPHKAPQ2M3C7 1700 aa23.98■■□□□ 1.43
ACTN1-209ENST00000553659 ATF3P18847 181 aa23.97■■□□□ 1.43
ACTN1-209ENST00000553659 AMOTL2Q9Y2J4 779 aa23.97■■□□□ 1.43
ACTN1-209ENST00000553659 PPARGC1BQ86YN6 1023 aaKnown RBP23.95■■□□□ 1.42
ACTN1-209ENST00000553659 PTPRUQ92729 1446 aa23.94■■□□□ 1.42
ACTN1-209ENST00000553659 AHDC1Q5TGY3 1603 aaPredicted RBP23.92■■□□□ 1.42
ACTN1-209ENST00000553659 NRXN3Q9Y4C0 1643 aa23.92■■□□□ 1.42
ACTN1-209ENST00000553659 SETBP1Q9Y6X0 1596 aa23.91■■□□□ 1.42
ACTN1-209ENST00000553659 SPATA31A6Q5VVP1 1343 aa23.91■■□□□ 1.42
ACTN1-209ENST00000553659 XRN1Q8IZH2 1706 aaKnown RBP23.9■■□□□ 1.42
ACTN1-209ENST00000553659 ZNF326Q5BKZ1 582 aaKnown RBP23.89■■□□□ 1.41
ACTN1-209ENST00000553659 SHPRHQ149N8 1683 aa23.89■■□□□ 1.41
ACTN1-209ENST00000553659 DCCP43146 1447 aa23.87■■□□□ 1.41
ACTN1-209ENST00000553659 LRP6O75581 1613 aa23.86■■□□□ 1.41
ACTN1-209ENST00000553659 ZEB1P37275 1124 aaPredicted RBP23.86■■□□□ 1.41
ACTN1-209ENST00000553659 BRINP3Q76B58 766 aa23.86■■□□□ 1.41
ACTN1-209ENST00000553659 KIF1BO60333 1816 aa23.85■■□□□ 1.41
ACTN1-209ENST00000553659 METP08581 1390 aa23.84■■□□□ 1.41
ACTN1-209ENST00000553659 MEX3CQ5U5Q3 659 aaKnown RBP23.84■■□□□ 1.41
ACTN1-209ENST00000553659 SETD1AO15047 1707 aaKnown RBP23.84■■□□□ 1.41
ACTN1-209ENST00000553659 CLTCL1P53675 1640 aa23.84■■□□□ 1.41
ACTN1-209ENST00000553659 ZNF772Q68DY9 489 aaPredicted RBP23.82■■□□□ 1.4
ACTN1-209ENST00000553659 NEXMIFQ5QGS0 1516 aa23.81■■□□□ 1.4
ACTN1-209ENST00000553659 RRBP1Q9P2E9 1410 aaKnown RBP23.8■■□□□ 1.4
ACTN1-209ENST00000553659 ASXL1Q8IXJ9 1541 aa23.79■■□□□ 1.4
ACTN1-209ENST00000553659 MST1RQ04912 1400 aa23.79■■□□□ 1.4
ACTN1-209ENST00000553659 NAIPQ13075 1403 aa23.78■■□□□ 1.4
ACTN1-209ENST00000553659 NHSL1Q5SYE7 1610 aa23.77■■□□□ 1.4
ACTN1-209ENST00000553659 SETD5Q9C0A6 1442 aa23.76■■□□□ 1.39
ACTN1-209ENST00000553659 NUTM2BA6NNL0 878 aaPredicted RBP23.75■■□□□ 1.39
ACTN1-209ENST00000553659 NUTM2EB1AL46 878 aaPredicted RBP23.75■■□□□ 1.39
ACTN1-209ENST00000553659 NUTM2AQ8IVF1 878 aaPredicted RBP23.75■■□□□ 1.39
ACTN1-209ENST00000553659 ADGRL3Q9HAR2 1447 aa23.75■■□□□ 1.39
ACTN1-209ENST00000553659 NALCNQ8IZF0 1738 aa23.74■■□□□ 1.39
ACTN1-209ENST00000553659 LRRC59Q96AG4 307 aaKnown RBP23.73■■□□□ 1.39
ACTN1-209ENST00000553659 VGFO15240 615 aaPredicted RBP23.72■■□□□ 1.39
ACTN1-209ENST00000553659 TRIM52Q96A61 297 aa23.71■■□□□ 1.39
ACTN1-209ENST00000553659 RXRBP28702 533 aa23.69■■□□□ 1.38
ACTN1-209ENST00000553659 RPGRIP1LQ68CZ1 1315 aa23.68■■□□□ 1.38
ACTN1-209ENST00000553659 DDX17Q92841 729 aaKnown RBP23.67■■□□□ 1.38
ACTN1-209ENST00000553659 HFM1A2PYH4 1435 aa23.67■■□□□ 1.38
ACTN1-209ENST00000553659 AFF2P51816 1311 aa23.66■■□□□ 1.38
ACTN1-209ENST00000553659 PTCH1Q13635 1447 aa23.66■■□□□ 1.38
ACTN1-209ENST00000553659 PPLO60437 1756 aa23.65■■□□□ 1.38
ACTN1-209ENST00000553659 C1orf167Q5SNV9 1468 aa23.65■■□□□ 1.38
ACTN1-209ENST00000553659 UPF1Q92900 1129 aaKnown RBP eCLIP23.65■■□□□ 1.38
ACTN1-209ENST00000553659 SLC4A1APQ9BWU0 796 aaKnown RBP23.65■■□□□ 1.38
ACTN1-209ENST00000553659 PNPLA6Q8IY17 1366 aa23.64■■□□□ 1.37
ACTN1-209ENST00000553659 CDK12Q9NYV4 1490 aaPredicted RBP23.63■■□□□ 1.37
ACTN1-209ENST00000553659 LAMC1P11047 1609 aa23.63■■□□□ 1.37
ACTN1-209ENST00000553659 ROBO2Q9HCK4 1378 aa23.63■■□□□ 1.37
ACTN1-209ENST00000553659 PRAG1Q86YV5 1406 aa23.61■■□□□ 1.37
ACTN1-209ENST00000553659 C8orf37Q96NL8 207 aa23.6■■□□□ 1.37
ACTN1-209ENST00000553659 ORAI2Q96SN7 254 aa23.58■■□□□ 1.37
ACTN1-209ENST00000553659 SOS2Q07890 1332 aaPredicted RBP23.58■■□□□ 1.36
ACTN1-209ENST00000553659 QTRT2Q9H974 415 aaKnown RBP23.57■■□□□ 1.36
ACTN1-209ENST00000553659 RBM6P78332 1123 aaKnown RBP23.55■■□□□ 1.36
ACTN1-209ENST00000553659 NGLY1Q96IV0 654 aa23.54■■□□□ 1.36
ACTN1-209ENST00000553659 ADAMTS2O95450 1211 aa23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms