RNA–Protein interactions for RNA: ENST00000553555.5

APEX1-205, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 1 (best)

Gene APEX1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-205ENST00000553555 KIAA1210Q9ULL0 1709 aa19.46■□□□□ 0.71
APEX1-205ENST00000553555 A2ML1A8K2U0 1454 aa19.46■□□□□ 0.71
APEX1-205ENST00000553555 EIF4G2P78344 907 aaKnown RBP eCLIP19.45■□□□□ 0.7
APEX1-205ENST00000553555 SETD1BQ9UPS6 1966 aaKnown RBP19.45■□□□□ 0.7
APEX1-205ENST00000553555 UBR1Q8IWV7 1749 aa19.45■□□□□ 0.7
APEX1-205ENST00000553555 NLRP1Q9C000 1473 aa19.44■□□□□ 0.7
APEX1-205ENST00000553555 PLPPR3Q6T4P5 718 aa19.44■□□□□ 0.7
APEX1-205ENST00000553555 VGFO15240 615 aaPredicted RBP19.43■□□□□ 0.7
APEX1-205ENST00000553555 HSPA5P11021 654 aaKnown RBP19.43■□□□□ 0.7
APEX1-205ENST00000553555 NBPF1Q3BBV0 1214 aa19.43■□□□□ 0.7
APEX1-205ENST00000553555 CARD11Q9BXL7 1154 aa19.43■□□□□ 0.7
APEX1-205ENST00000553555 ROCK2O75116 1388 aaKnown RBP19.43■□□□□ 0.7
APEX1-205ENST00000553555 GPRASP1Q5JY77 1395 aa19.43■□□□□ 0.7
APEX1-205ENST00000553555 LAMC1P11047 1609 aa19.43■□□□□ 0.7
APEX1-205ENST00000553555 ZFYVE9O95405 1425 aa19.43■□□□□ 0.7
APEX1-205ENST00000553555 HIRIP3Q9BW71 556 aaPredicted RBP19.42■□□□□ 0.7
APEX1-205ENST00000553555 NUTM2DQ5VT03 806 aaPredicted RBP19.4■□□□□ 0.7
APEX1-205ENST00000553555 PIK3C2GO75747 1445 aa19.39■□□□□ 0.69
APEX1-205ENST00000553555 MYO3AQ8NEV4 1616 aa19.39■□□□□ 0.69
APEX1-205ENST00000553555 USP47Q96K76 1375 aa19.38■□□□□ 0.69
APEX1-205ENST00000553555 CFAP70Q5T0N1 1121 aa19.38■□□□□ 0.69
APEX1-205ENST00000553555 RIMS2Q9UQ26 1411 aa19.38■□□□□ 0.69
APEX1-205ENST00000553555 C14orf93Q9H972 538 aaKnown RBP19.36■□□□□ 0.69
APEX1-205ENST00000553555 PTPRMP28827 1452 aa19.36■□□□□ 0.69
APEX1-205ENST00000553555 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.34■□□□□ 0.69
APEX1-205ENST00000553555 IQGAP1P46940 1657 aa19.34■□□□□ 0.69
APEX1-205ENST00000553555 SETBP1Q9Y6X0 1596 aa19.33■□□□□ 0.69
APEX1-205ENST00000553555 HDGFP51858 240 aaKnown RBP19.33■□□□□ 0.69
APEX1-205ENST00000553555 TMEM2Q9UHN6 1383 aa19.33■□□□□ 0.69
APEX1-205ENST00000553555 CEP170BQ9Y4F5 1589 aaPredicted RBP19.32■□□□□ 0.68
APEX1-205ENST00000553555 THEMISQ8N1K5 641 aaPredicted RBP19.31■□□□□ 0.68
APEX1-205ENST00000553555 ZNF142P52746 1687 aaPredicted RBP19.31■□□□□ 0.68
APEX1-205ENST00000553555 POLR1AO95602 1720 aaPredicted RBP19.3■□□□□ 0.68
APEX1-205ENST00000553555 SCAF11Q99590 1463 aaKnown RBP19.3■□□□□ 0.68
APEX1-205ENST00000553555 ST20-MTHFSA0A0A6YYL1 179 aa19.29■□□□□ 0.68
APEX1-205ENST00000553555 SLIT1O75093 1534 aa19.29■□□□□ 0.68
APEX1-205ENST00000553555 ADGRB1O14514 1584 aa19.29■□□□□ 0.68
APEX1-205ENST00000553555 ARHGAP23Q9P227 1491 aa19.29■□□□□ 0.68
APEX1-205ENST00000553555 ALKQ9UM73 1620 aa19.28■□□□□ 0.68
APEX1-205ENST00000553555 DIEXFQ68CQ4 756 aaKnown RBP19.27■□□□□ 0.68
APEX1-205ENST00000553555 NRXN3Q9Y4C0 1643 aa19.26■□□□□ 0.67
APEX1-205ENST00000553555 KDM4FA0A1W2PPD8 638 aa19.25■□□□□ 0.67
APEX1-205ENST00000553555 C11orf95C9JLR9 678 aaPredicted RBP19.25■□□□□ 0.67
APEX1-205ENST00000553555 LTKP29376 864 aa19.25■□□□□ 0.67
APEX1-205ENST00000553555 TMEM132EQ6IEE7 984 aa19.25■□□□□ 0.67
APEX1-205ENST00000553555 SETD1AO15047 1707 aaKnown RBP19.25■□□□□ 0.67
APEX1-205ENST00000553555 TXNDC2Q86VQ3 553 aa19.25■□□□□ 0.67
APEX1-205ENST00000553555 SENP3Q9H4L4 574 aaPredicted RBP19.25■□□□□ 0.67
APEX1-205ENST00000553555 EID1Q9Y6B2 187 aa19.24■□□□□ 0.67
APEX1-205ENST00000553555 WASHC2AQ641Q2 1341 aa19.23■□□□□ 0.67
APEX1-205ENST00000553555 ASXL1Q8IXJ9 1541 aa19.23■□□□□ 0.67
APEX1-205ENST00000553555 EIF3AQ14152 1382 aaKnown RBP19.21■□□□□ 0.67
APEX1-205ENST00000553555 CCDC7Q96M83 1385 aa19.21■□□□□ 0.67
APEX1-205ENST00000553555 PLEKHG1Q9ULL1 1385 aa19.21■□□□□ 0.67
APEX1-205ENST00000553555 TESK2Q96S53 571 aa19.21■□□□□ 0.67
APEX1-205ENST00000553555 DDX10Q13206 875 aaKnown RBP19.19■□□□□ 0.66
APEX1-205ENST00000553555 TRAK1Q9UPV9 953 aa19.19■□□□□ 0.66
APEX1-205ENST00000553555 KIF7Q2M1P5 1343 aa19.18■□□□□ 0.66
APEX1-205ENST00000553555 ARHGEF28Q8N1W1 1705 aaKnown RBP19.18■□□□□ 0.66
APEX1-205ENST00000553555 BCANQ96GW7 911 aa19.18■□□□□ 0.66
APEX1-205ENST00000553555 YTHDC2Q9H6S0 1430 aaKnown RBP19.17■□□□□ 0.66
APEX1-205ENST00000553555 ADAMTS13Q76LX8 1427 aa19.17■□□□□ 0.66
APEX1-205ENST00000553555 MED14O60244 1454 aa19.15■□□□□ 0.66
APEX1-205ENST00000553555 ANKLE2Q86XL3 938 aa19.14■□□□□ 0.66
APEX1-205ENST00000553555 STK26Q9P289 416 aa19.14■□□□□ 0.66
APEX1-205ENST00000553555 CENPJQ9HC77 1338 aaPredicted RBP19.14■□□□□ 0.65
APEX1-205ENST00000553555 TMF1P82094 1093 aa19.14■□□□□ 0.65
APEX1-205ENST00000553555 QRICH2Q9H0J4 1663 aa19.14■□□□□ 0.65
APEX1-205ENST00000553555 METP08581 1390 aa19.13■□□□□ 0.65
APEX1-205ENST00000553555 LRPPRCP42704 1394 aaKnown RBP19.13■□□□□ 0.65
APEX1-205ENST00000553555 SLC24A1O60721 1099 aa19.13■□□□□ 0.65
APEX1-205ENST00000553555 DISP3Q9P2K9 1392 aa19.12■□□□□ 0.65
APEX1-205ENST00000553555 TBX22Q9Y458 520 aa19.11■□□□□ 0.65
APEX1-205ENST00000553555 ABCC11Q96J66 1382 aa19.11■□□□□ 0.65
APEX1-205ENST00000553555 SBNO2Q9Y2G9 1366 aa19.11■□□□□ 0.65
APEX1-205ENST00000553555 DIP2AQ14689 1571 aa19.11■□□□□ 0.65
APEX1-205ENST00000553555 KNDC1Q76NI1 1749 aa19.1■□□□□ 0.65
APEX1-205ENST00000553555 DLC1Q96QB1 1528 aa19.1■□□□□ 0.65
APEX1-205ENST00000553555 SLC26A8Q96RN1 970 aa19.1■□□□□ 0.65
APEX1-205ENST00000553555 POLR3GLQ9BT43 218 aa19.09■□□□□ 0.65
APEX1-205ENST00000553555 CDCA8Q53HL2 280 aa19.07■□□□□ 0.64
APEX1-205ENST00000553555 SIRT1Q96EB6 747 aa19.07■□□□□ 0.64
APEX1-205ENST00000553555 PRAM1Q96QH2 718 aa19.06■□□□□ 0.64
APEX1-205ENST00000553555 TECPR2O15040 1411 aa19.05■□□□□ 0.64
APEX1-205ENST00000553555 POGKQ9P215 609 aa19.05■□□□□ 0.64
APEX1-205ENST00000553555 PTPRUQ92729 1446 aa19.04■□□□□ 0.64
APEX1-205ENST00000553555 CPS1P31327 1500 aa19.04■□□□□ 0.64
APEX1-205ENST00000553555 NCKAP5LQ9HCH0 1330 aa19.03■□□□□ 0.64
APEX1-205ENST00000553555 NPHP4O75161 1426 aaPredicted RBP19.03■□□□□ 0.64
APEX1-205ENST00000553555 SAFB2Q14151 953 aaKnown RBP eCLIP19.03■□□□□ 0.64
APEX1-205ENST00000553555 CHD2O14647 1828 aaKnown RBP19.03■□□□□ 0.64
APEX1-205ENST00000553555 PIK3R4Q99570 1358 aa19.03■□□□□ 0.64
APEX1-205ENST00000553555 WAPLQ7Z5K2 1190 aa19.02■□□□□ 0.64
APEX1-205ENST00000553555 FAM135BQ49AJ0 1406 aa19.02■□□□□ 0.63
APEX1-205ENST00000553555 MIER1Q8N108 512 aa19.01■□□□□ 0.63
APEX1-205ENST00000553555 LMTK3Q96Q04 1460 aa19■□□□□ 0.63
APEX1-205ENST00000553555 PLEKHH1Q9ULM0 1364 aa19■□□□□ 0.63
APEX1-205ENST00000553555 AMOTL2Q9Y2J4 779 aa19■□□□□ 0.63
APEX1-205ENST00000553555 TULP4Q9NRJ4 1543 aa19■□□□□ 0.63
APEX1-205ENST00000553555 EVC2Q86UK5 1308 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms