RNA–Protein interactions for RNA: ENST00000553508.5

PCNX1-205, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 645 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-205ENST00000553508 HCSTQ9UBK5 93 aa15.75■□□□□ 0.11
PCNX1-205ENST00000553508 HPS5Q9UPZ3 1129 aa15.75■□□□□ 0.11
PCNX1-205ENST00000553508 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.74■□□□□ 0.11
PCNX1-205ENST00000553508 TMEM134Q9H6X4 195 aa15.73■□□□□ 0.11
PCNX1-205ENST00000553508 WBP1LQ9NX94 342 aa15.71■□□□□ 0.11
PCNX1-205ENST00000553508 TSR3Q9UJK0 312 aaKnown RBP15.7■□□□□ 0.1
PCNX1-205ENST00000553508 PPP4CP60510 307 aa15.69■□□□□ 0.1
PCNX1-205ENST00000553508 SLC24A3Q9HC58 644 aa15.68■□□□□ 0.1
PCNX1-205ENST00000553508 SLC4A3P48751 1232 aa15.67■□□□□ 0.1
PCNX1-205ENST00000553508 SLF2Q8IX21 1173 aa15.67■□□□□ 0.1
PCNX1-205ENST00000553508 MDM2Q00987 491 aaPredicted RBP15.64■□□□□ 0.09
PCNX1-205ENST00000553508 DAXXQ9UER7 740 aaPredicted RBP15.62■□□□□ 0.09
PCNX1-205ENST00000553508 TPRNQ4KMQ1 711 aa15.61■□□□□ 0.09
PCNX1-205ENST00000553508 AK7Q96M32 723 aa15.61■□□□□ 0.09
PCNX1-205ENST00000553508 DDX11L8A8MPP1 907 aa15.6■□□□□ 0.09
PCNX1-205ENST00000553508 SLC10A3P09131 477 aa15.57■□□□□ 0.08
PCNX1-205ENST00000553508 RDH13Q8NBN7 331 aa15.57■□□□□ 0.08
PCNX1-205ENST00000553508 TRIM66O15016 1216 aa15.56■□□□□ 0.08
PCNX1-205ENST00000553508 APLP1P51693 650 aa15.55■□□□□ 0.08
PCNX1-205ENST00000553508 TTLL12Q14166 644 aaPredicted RBP15.55■□□□□ 0.08
PCNX1-205ENST00000553508 NECTIN2Q92692 538 aa15.55■□□□□ 0.08
PCNX1-205ENST00000553508 NYAP1Q6ZVC0 841 aa15.53■□□□□ 0.08
PCNX1-205ENST00000553508 GPCPD1Q9NPB8 672 aa15.53■□□□□ 0.08
PCNX1-205ENST00000553508 CFHP08603 1231 aa15.52■□□□□ 0.08
PCNX1-205ENST00000553508 CLCN1P35523 988 aa15.52■□□□□ 0.08
PCNX1-205ENST00000553508 RSPH4AQ5TD94 716 aa15.52■□□□□ 0.08
PCNX1-205ENST00000553508 REPIN1Q9BWE0 567 aaKnown RBP15.52■□□□□ 0.08
PCNX1-205ENST00000553508 SULF1Q8IWU6 871 aa15.51■□□□□ 0.07
PCNX1-205ENST00000553508 AMHR2Q16671 573 aa15.49■□□□□ 0.07
PCNX1-205ENST00000553508 KMT5BQ4FZB7 885 aa15.48■□□□□ 0.07
PCNX1-205ENST00000553508 PDE4DQ08499 809 aa15.46■□□□□ 0.07
PCNX1-205ENST00000553508 TMUB1Q9BVT8 246 aa15.46■□□□□ 0.07
PCNX1-205ENST00000553508 FAM217BQ9NTX9 383 aaPredicted RBP15.45■□□□□ 0.06
PCNX1-205ENST00000553508 PRKCSHP14314 528 aaPredicted RBP15.44■□□□□ 0.06
PCNX1-205ENST00000553508 PRR14Q9BWN1 585 aa15.44■□□□□ 0.06
PCNX1-205ENST00000553508 PLA2G2EQ9NZK7 142 aa15.44■□□□□ 0.06
PCNX1-205ENST00000553508 SSTR3P32745 418 aaPredicted RBP15.43■□□□□ 0.06
PCNX1-205ENST00000553508 GIGYF2Q6Y7W6 1299 aaKnown RBP15.43■□□□□ 0.06
PCNX1-205ENST00000553508 PARP9Q8IXQ6 854 aa15.43■□□□□ 0.06
PCNX1-205ENST00000553508 CD46P15529 392 aa15.42■□□□□ 0.06
PCNX1-205ENST00000553508 COPS2P61201 443 aa15.42■□□□□ 0.06
PCNX1-205ENST00000553508 PCDHB3Q9Y5E6 796 aa15.42■□□□□ 0.06
PCNX1-205ENST00000553508 GCGRP47871 477 aa15.41■□□□□ 0.06
PCNX1-205ENST00000553508 ACTN4O43707 911 aaKnown RBP15.4■□□□□ 0.06
PCNX1-205ENST00000553508 MTRQ99707 1265 aa15.4■□□□□ 0.06
PCNX1-205ENST00000553508 PUS10Q3MIT2 529 aaKnown RBP15.38■□□□□ 0.05
PCNX1-205ENST00000553508 TJAP1Q5JTD0 557 aa15.37■□□□□ 0.05
PCNX1-205ENST00000553508 BLOC1S3Q6QNY0 202 aa15.37■□□□□ 0.05
PCNX1-205ENST00000553508 KCNC4Q03721 635 aa15.36■□□□□ 0.05
PCNX1-205ENST00000553508 FUT2Q10981 343 aa15.36■□□□□ 0.05
PCNX1-205ENST00000553508 ZNF516Q92618 1163 aa15.36■□□□□ 0.05
PCNX1-205ENST00000553508 IL21Q9HBE4 155 aa15.35■□□□□ 0.05
PCNX1-205ENST00000553508 ITGBL1O95965 494 aaPredicted RBP15.34■□□□□ 0.05
PCNX1-205ENST00000553508 MS4A1P11836 297 aa15.33■□□□□ 0.04
PCNX1-205ENST00000553508 GPBP1L1Q9HC44 474 aaPredicted RBP15.32■□□□□ 0.04
PCNX1-205ENST00000553508 KDM4AO75164 1064 aa15.31■□□□□ 0.04
PCNX1-205ENST00000553508 BEGAINQ9BUH8 593 aa15.31■□□□□ 0.04
PCNX1-205ENST00000553508 NUTM1Q86Y26 1132 aa15.3■□□□□ 0.04
PCNX1-205ENST00000553508 ATP6V1AP38606 617 aa15.29■□□□□ 0.04
PCNX1-205ENST00000553508 ZPR1O75312 459 aa15.27■□□□□ 0.04
PCNX1-205ENST00000553508 NKX2-3Q8TAU0 364 aa15.26■□□□□ 0.03
PCNX1-205ENST00000553508 NR1I2O75469 434 aa15.25■□□□□ 0.03
PCNX1-205ENST00000553508 GRIPAP1Q4V328 841 aa15.25■□□□□ 0.03
PCNX1-205ENST00000553508 MORN1Q5T089 497 aa15.25■□□□□ 0.03
PCNX1-205ENST00000553508 SCUBE3Q8IX30 993 aa15.25■□□□□ 0.03
PCNX1-205ENST00000553508 HLA-CQ95604 372 aa15.25■□□□□ 0.03
PCNX1-205ENST00000553508 TLL1O43897 1013 aa15.24■□□□□ 0.03
PCNX1-205ENST00000553508 NEUROD2Q15784 382 aa15.24■□□□□ 0.03
PCNX1-205ENST00000553508 KDM4CQ9H3R0 1056 aa15.24■□□□□ 0.03
PCNX1-205ENST00000553508 SLC27A5Q9Y2P5 690 aa15.23■□□□□ 0.03
PCNX1-205ENST00000553508 SPIRE2Q8WWL2 714 aa15.22■□□□□ 0.03
PCNX1-205ENST00000553508 USP46P62068 366 aa15.21■□□□□ 0.03
PCNX1-205ENST00000553508 GUCA2AQ02747 115 aa15.21■□□□□ 0.03
PCNX1-205ENST00000553508 HOXA2O43364 376 aa15.2■□□□□ 0.02
PCNX1-205ENST00000553508 IFFO2Q5TF58 517 aa15.2■□□□□ 0.02
PCNX1-205ENST00000553508 TBC1D2Q9BYX2 928 aa15.18■□□□□ 0.02
PCNX1-205ENST00000553508 NDUFV2P19404 249 aa15.17■□□□□ 0.02
PCNX1-205ENST00000553508 MOXD2PA6NHM9 499 aa15.15■□□□□ 0.02
PCNX1-205ENST00000553508 BRPF1P55201 1214 aaPredicted RBP15.15■□□□□ 0.02
PCNX1-205ENST00000553508 SPSB2Q99619 263 aa15.15■□□□□ 0.02
PCNX1-205ENST00000553508 FAM117AQ9C073 453 aa15.15■□□□□ 0.02
PCNX1-205ENST00000553508 A0A0G2JS52 829 aa15.14■□□□□ 0.01
PCNX1-205ENST00000553508 RNF19BQ6ZMZ0 732 aa15.13■□□□□ 0.01
PCNX1-205ENST00000553508 FMNL1O95466 1100 aaPredicted RBP15.12■□□□□ 0.01
PCNX1-205ENST00000553508 ADH1BP00325 375 aa15.12■□□□□ 0.01
PCNX1-205ENST00000553508 FDX1P10109 184 aa15.12■□□□□ 0.01
PCNX1-205ENST00000553508 PPP1R18Q6NYC8 613 aa15.11■□□□□ 0.01
PCNX1-205ENST00000553508 DIXDC1Q155Q3 683 aa15.1■□□□□ 0.01
PCNX1-205ENST00000553508 BRICD5Q6PL45 260 aa15.1■□□□□ 0.01
PCNX1-205ENST00000553508 SYMPKQ92797 1274 aaKnown RBP15.1■□□□□ 0.01
PCNX1-205ENST00000553508 THAP11Q96EK4 314 aa15.1■□□□□ 0.01
PCNX1-205ENST00000553508 Q3C1V9 767 aa15.09■□□□□ 0.01
PCNX1-205ENST00000553508 PCDHGC3Q9UN70 934 aa15.09■□□□□ 0.01
PCNX1-205ENST00000553508 S1PR4O95977 384 aa15.08■□□□□ 0
PCNX1-205ENST00000553508 DDRGK1Q96HY6 314 aa15.07■□□□□ 0
PCNX1-205ENST00000553508 SLC6A16Q9GZN6 736 aa15.07■□□□□ 0
PCNX1-205ENST00000553508 CSPP1Q1MSJ5 1256 aa15.06■□□□□ 0
PCNX1-205ENST00000553508 MYSM1Q5VVJ2 828 aa15.06■□□□□ 0
PCNX1-205ENST00000553508 RIC3Q7Z5B4 369 aa15.06■□□□□ 0
PCNX1-205ENST00000553508 IL27Q8NEV9 243 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms