RNA–Protein interactions for RNA: ENST00000553447.6

PSEN1-206, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-206ENST00000553447 HSPA5P11021 654 aaKnown RBP24.86■■□□□ 1.57
PSEN1-206ENST00000553447 KDM5AP29375 1690 aaKnown RBP24.85■■□□□ 1.57
PSEN1-206ENST00000553447 GPRASP1Q5JY77 1395 aa24.85■■□□□ 1.57
PSEN1-206ENST00000553447 HIRIP3Q9BW71 556 aaPredicted RBP24.84■■□□□ 1.57
PSEN1-206ENST00000553447 CARD11Q9BXL7 1154 aa24.83■■□□□ 1.57
PSEN1-206ENST00000553447 USP47Q96K76 1375 aa24.82■■□□□ 1.56
PSEN1-206ENST00000553447 A2ML1A8K2U0 1454 aa24.82■■□□□ 1.56
PSEN1-206ENST00000553447 ADGRF5Q8IZF2 1346 aa24.82■■□□□ 1.56
PSEN1-206ENST00000553447 UBR1Q8IWV7 1749 aa24.81■■□□□ 1.56
PSEN1-206ENST00000553447 CEBPAP49715 358 aaPredicted RBP24.8■■□□□ 1.56
PSEN1-206ENST00000553447 NBPF1Q3BBV0 1214 aa24.8■■□□□ 1.56
PSEN1-206ENST00000553447 POLR1AO95602 1720 aaPredicted RBP24.79■■□□□ 1.56
PSEN1-206ENST00000553447 IQGAP1P46940 1657 aa24.78■■□□□ 1.56
PSEN1-206ENST00000553447 PIK3C2GO75747 1445 aa24.78■■□□□ 1.56
PSEN1-206ENST00000553447 ZFYVE9O95405 1425 aa24.78■■□□□ 1.56
PSEN1-206ENST00000553447 NLRP1Q9C000 1473 aa24.78■■□□□ 1.56
PSEN1-206ENST00000553447 STAG3Q9UJ98 1225 aa24.78■■□□□ 1.56
PSEN1-206ENST00000553447 DIEXFQ68CQ4 756 aaKnown RBP24.77■■□□□ 1.56
PSEN1-206ENST00000553447 VGFO15240 615 aaPredicted RBP24.75■■□□□ 1.55
PSEN1-206ENST00000553447 SETBP1Q9Y6X0 1596 aa24.74■■□□□ 1.55
PSEN1-206ENST00000553447 MYO3AQ8NEV4 1616 aa24.74■■□□□ 1.55
PSEN1-206ENST00000553447 RIMS2Q9UQ26 1411 aa24.7■■□□□ 1.55
PSEN1-206ENST00000553447 CFAP70Q5T0N1 1121 aa24.7■■□□□ 1.54
PSEN1-206ENST00000553447 PLPPR3Q6T4P5 718 aa24.7■■□□□ 1.54
PSEN1-206ENST00000553447 NUTM2DQ5VT03 806 aaPredicted RBP24.69■■□□□ 1.54
PSEN1-206ENST00000553447 C14orf93Q9H972 538 aaKnown RBP24.68■■□□□ 1.54
PSEN1-206ENST00000553447 SCAF11Q99590 1463 aaKnown RBP24.68■■□□□ 1.54
PSEN1-206ENST00000553447 ADGRB1O14514 1584 aa24.66■■□□□ 1.54
PSEN1-206ENST00000553447 ST20-MTHFSA0A0A6YYL1 179 aa24.65■■□□□ 1.54
PSEN1-206ENST00000553447 WASHC2AQ641Q2 1341 aa24.63■■□□□ 1.53
PSEN1-206ENST00000553447 ZNF142P52746 1687 aaPredicted RBP24.63■■□□□ 1.53
PSEN1-206ENST00000553447 CEP170BQ9Y4F5 1589 aaPredicted RBP24.63■■□□□ 1.53
PSEN1-206ENST00000553447 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.62■■□□□ 1.53
PSEN1-206ENST00000553447 CCDC7Q96M83 1385 aa24.62■■□□□ 1.53
PSEN1-206ENST00000553447 TMEM2Q9UHN6 1383 aa24.62■■□□□ 1.53
PSEN1-206ENST00000553447 SETD1BQ9UPS6 1966 aaKnown RBP24.62■■□□□ 1.53
PSEN1-206ENST00000553447 C11orf95C9JLR9 678 aaPredicted RBP24.61■■□□□ 1.53
PSEN1-206ENST00000553447 SETD1AO15047 1707 aaKnown RBP24.61■■□□□ 1.53
PSEN1-206ENST00000553447 ALKQ9UM73 1620 aa24.61■■□□□ 1.53
PSEN1-206ENST00000553447 PTPRMP28827 1452 aa24.6■■□□□ 1.53
PSEN1-206ENST00000553447 NRXN3Q9Y4C0 1643 aa24.6■■□□□ 1.53
PSEN1-206ENST00000553447 ASXL1Q8IXJ9 1541 aa24.6■■□□□ 1.53
PSEN1-206ENST00000553447 EIF3AQ14152 1382 aaKnown RBP24.59■■□□□ 1.53
PSEN1-206ENST00000553447 HDGFP51858 240 aaKnown RBP24.59■■□□□ 1.53
PSEN1-206ENST00000553447 SLIT1O75093 1534 aa24.59■■□□□ 1.53
PSEN1-206ENST00000553447 DDX10Q13206 875 aaKnown RBP24.58■■□□□ 1.53
PSEN1-206ENST00000553447 ARHGAP23Q9P227 1491 aa24.58■■□□□ 1.52
PSEN1-206ENST00000553447 KIF7Q2M1P5 1343 aa24.57■■□□□ 1.52
PSEN1-206ENST00000553447 ARHGEF28Q8N1W1 1705 aaKnown RBP24.55■■□□□ 1.52
PSEN1-206ENST00000553447 TESK2Q96S53 571 aa24.54■■□□□ 1.52
PSEN1-206ENST00000553447 TMEM132EQ6IEE7 984 aa24.53■■□□□ 1.52
PSEN1-206ENST00000553447 THEMISQ8N1K5 641 aaPredicted RBP24.52■■□□□ 1.52
PSEN1-206ENST00000553447 QRICH2Q9H0J4 1663 aa24.51■■□□□ 1.51
PSEN1-206ENST00000553447 SENP3Q9H4L4 574 aaPredicted RBP24.5■■□□□ 1.51
PSEN1-206ENST00000553447 PLEKHG1Q9ULL1 1385 aa24.48■■□□□ 1.51
PSEN1-206ENST00000553447 LTKP29376 864 aa24.47■■□□□ 1.51
PSEN1-206ENST00000553447 TXNDC2Q86VQ3 553 aa24.47■■□□□ 1.51
PSEN1-206ENST00000553447 TRAK1Q9UPV9 953 aa24.47■■□□□ 1.51
PSEN1-206ENST00000553447 EID1Q9Y6B2 187 aa24.47■■□□□ 1.51
PSEN1-206ENST00000553447 YTHDC2Q9H6S0 1430 aaKnown RBP24.46■■□□□ 1.51
PSEN1-206ENST00000553447 DISP3Q9P2K9 1392 aa24.46■■□□□ 1.51
PSEN1-206ENST00000553447 TMF1P82094 1093 aa24.45■■□□□ 1.5
PSEN1-206ENST00000553447 SBNO2Q9Y2G9 1366 aa24.44■■□□□ 1.5
PSEN1-206ENST00000553447 CENPJQ9HC77 1338 aaPredicted RBP24.44■■□□□ 1.5
PSEN1-206ENST00000553447 KNDC1Q76NI1 1749 aa24.44■■□□□ 1.5
PSEN1-206ENST00000553447 ADAMTS13Q76LX8 1427 aa24.43■■□□□ 1.5
PSEN1-206ENST00000553447 POLR3GLQ9BT43 218 aa24.42■■□□□ 1.5
PSEN1-206ENST00000553447 DLC1Q96QB1 1528 aa24.41■■□□□ 1.5
PSEN1-206ENST00000553447 SLC24A1O60721 1099 aa24.41■■□□□ 1.5
PSEN1-206ENST00000553447 MIER1Q8N108 512 aa24.41■■□□□ 1.5
PSEN1-206ENST00000553447 LRPPRCP42704 1394 aaKnown RBP24.41■■□□□ 1.5
PSEN1-206ENST00000553447 MED14O60244 1454 aa24.4■■□□□ 1.5
PSEN1-206ENST00000553447 BCANQ96GW7 911 aa24.4■■□□□ 1.5
PSEN1-206ENST00000553447 DIP2AQ14689 1571 aa24.4■■□□□ 1.5
PSEN1-206ENST00000553447 STK26Q9P289 416 aa24.39■■□□□ 1.49
PSEN1-206ENST00000553447 METP08581 1390 aa24.39■■□□□ 1.49
PSEN1-206ENST00000553447 KDM4FA0A1W2PPD8 638 aa24.36■■□□□ 1.49
PSEN1-206ENST00000553447 CDCA8Q53HL2 280 aa24.36■■□□□ 1.49
PSEN1-206ENST00000553447 ABCC11Q96J66 1382 aa24.36■■□□□ 1.49
PSEN1-206ENST00000553447 MYOM1P52179 1685 aa24.34■■□□□ 1.49
PSEN1-206ENST00000553447 CPS1P31327 1500 aa24.34■■□□□ 1.49
PSEN1-206ENST00000553447 TECPR2O15040 1411 aa24.33■■□□□ 1.49
PSEN1-206ENST00000553447 ANKLE2Q86XL3 938 aa24.32■■□□□ 1.48
PSEN1-206ENST00000553447 TBX22Q9Y458 520 aa24.31■■□□□ 1.48
PSEN1-206ENST00000553447 TULP4Q9NRJ4 1543 aa24.3■■□□□ 1.48
PSEN1-206ENST00000553447 PRAM1Q96QH2 718 aa24.3■■□□□ 1.48
PSEN1-206ENST00000553447 SLC26A8Q96RN1 970 aa24.29■■□□□ 1.48
PSEN1-206ENST00000553447 ANP32CO43423 234 aa24.28■■□□□ 1.48
PSEN1-206ENST00000553447 POGKQ9P215 609 aa24.28■■□□□ 1.48
PSEN1-206ENST00000553447 FAM135BQ49AJ0 1406 aa24.27■■□□□ 1.48
PSEN1-206ENST00000553447 SIRT1Q96EB6 747 aa24.27■■□□□ 1.48
PSEN1-206ENST00000553447 PTPRUQ92729 1446 aa24.26■■□□□ 1.47
PSEN1-206ENST00000553447 XRN1Q8IZH2 1706 aaKnown RBP24.25■■□□□ 1.47
PSEN1-206ENST00000553447 SAFB2Q14151 953 aaKnown RBP eCLIP24.25■■□□□ 1.47
PSEN1-206ENST00000553447 EVC2Q86UK5 1308 aa24.25■■□□□ 1.47
PSEN1-206ENST00000553447 PLEKHH1Q9ULM0 1364 aa24.24■■□□□ 1.47
PSEN1-206ENST00000553447 NPHP4O75161 1426 aaPredicted RBP24.23■■□□□ 1.47
PSEN1-206ENST00000553447 CHD2O14647 1828 aaKnown RBP24.22■■□□□ 1.47
PSEN1-206ENST00000553447 PIK3R4Q99570 1358 aa24.22■■□□□ 1.47
PSEN1-206ENST00000553447 PUS7Q96PZ0 661 aaKnown RBP24.22■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms