RNA–Protein interactions for RNA: ENST00000553353.5

FOXN3-203, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-203ENST00000553353 PRKD2Q9BZL6 878 aa7.16□□□□□ -1.26
FOXN3-203ENST00000553353 SLC4A3P48751 1232 aa7.15□□□□□ -1.26
FOXN3-203ENST00000553353 TRAF7Q6Q0C0 670 aa7.15□□□□□ -1.26
FOXN3-203ENST00000553353 SLF2Q8IX21 1173 aa7.15□□□□□ -1.26
FOXN3-203ENST00000553353 TTC13Q8NBP0 860 aa7.15□□□□□ -1.26
FOXN3-203ENST00000553353 CDHR5Q9HBB8 845 aa7.15□□□□□ -1.26
FOXN3-203ENST00000553353 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.15□□□□□ -1.26
FOXN3-203ENST00000553353 CADPSQ9ULU8 1353 aa7.15□□□□□ -1.26
FOXN3-203ENST00000553353 NRG2O14511 850 aaPredicted RBP7.14□□□□□ -1.27
FOXN3-203ENST00000553353 RNF40O75150 1001 aa7.14□□□□□ -1.27
FOXN3-203ENST00000553353 APLP1P51693 650 aa7.14□□□□□ -1.27
FOXN3-203ENST00000553353 ARAP1Q96P48 1450 aa7.14□□□□□ -1.27
FOXN3-203ENST00000553353 KIF21AQ7Z4S6 1674 aa7.13□□□□□ -1.27
FOXN3-203ENST00000553353 GGCXP38435 758 aa7.13□□□□□ -1.27
FOXN3-203ENST00000553353 PAXIP1Q6ZW49 1069 aaPredicted RBP7.13□□□□□ -1.27
FOXN3-203ENST00000553353 CFAP44Q96MT7 982 aa7.13□□□□□ -1.27
FOXN3-203ENST00000553353 PRR14Q9BWN1 585 aa7.13□□□□□ -1.27
FOXN3-203ENST00000553353 BAZ1BQ9UIG0 1483 aaKnown RBP7.12□□□□□ -1.27
FOXN3-203ENST00000553353 AMER1Q5JTC6 1135 aaPredicted RBP7.12□□□□□ -1.27
FOXN3-203ENST00000553353 ZNF516Q92618 1163 aa7.12□□□□□ -1.27
FOXN3-203ENST00000553353 TMUB1Q9BVT8 246 aa7.12□□□□□ -1.27
FOXN3-203ENST00000553353 NPDC1Q9NQX5 325 aaPredicted RBP7.12□□□□□ -1.27
FOXN3-203ENST00000553353 SWT1Q5T5J6 900 aaKnown RBP7.11□□□□□ -1.27
FOXN3-203ENST00000553353 PADI6Q6TGC4 694 aa7.1□□□□□ -1.27
FOXN3-203ENST00000553353 PEG3Q9GZU2 1588 aa7.09□□□□□ -1.27
FOXN3-203ENST00000553353 EYA1Q99502 592 aa7.09□□□□□ -1.27
FOXN3-203ENST00000553353 LCE2BO14633 110 aa7.08□□□□□ -1.28
FOXN3-203ENST00000553353 ZPR1O75312 459 aa7.08□□□□□ -1.28
FOXN3-203ENST00000553353 COPS2P61201 443 aa7.07□□□□□ -1.28
FOXN3-203ENST00000553353 NKX2-3Q8TAU0 364 aa7.07□□□□□ -1.28
FOXN3-203ENST00000553353 ARHGEF1Q92888 912 aaKnown RBP7.07□□□□□ -1.28
FOXN3-203ENST00000553353 SMARCA4P51532 1647 aa7.07□□□□□ -1.28
FOXN3-203ENST00000553353 PDZRN3Q9UPQ7 1066 aa7.06□□□□□ -1.28
FOXN3-203ENST00000553353 PCDHB3Q9Y5E6 796 aa7.05□□□□□ -1.28
FOXN3-203ENST00000553353 DNAJB2P25686 324 aa7.04□□□□□ -1.28
FOXN3-203ENST00000553353 RBM46Q8TBY0 533 aaKnown RBP7.04□□□□□ -1.28
FOXN3-203ENST00000553353 URB2Q14146 1524 aaKnown RBP7.04□□□□□ -1.28
FOXN3-203ENST00000553353 ZNF608Q9ULD9 1512 aaPredicted RBP7.03□□□□□ -1.28
FOXN3-203ENST00000553353 PTGDRQ13258 359 aa7.03□□□□□ -1.28
FOXN3-203ENST00000553353 CEP164Q9UPV0 1460 aa7.03□□□□□ -1.28
FOXN3-203ENST00000553353 RSF1Q96T23 1441 aaPredicted RBP7.02□□□□□ -1.29
FOXN3-203ENST00000553353 TMEM134Q9H6X4 195 aa7.02□□□□□ -1.29
FOXN3-203ENST00000553353 FANCD2Q9BXW9 1451 aa7.02□□□□□ -1.29
FOXN3-203ENST00000553353 KMT5BQ4FZB7 885 aa7.01□□□□□ -1.29
FOXN3-203ENST00000553353 RNF223E7ERA6 249 aa7□□□□□ -1.29
FOXN3-203ENST00000553353 SLC19A1P41440 591 aa7□□□□□ -1.29
FOXN3-203ENST00000553353 MLLT3P42568 568 aaPredicted RBP7□□□□□ -1.29
FOXN3-203ENST00000553353 ZNF787Q6DD87 383 aa7□□□□□ -1.29
FOXN3-203ENST00000553353 BLOC1S3Q6QNY0 202 aa7□□□□□ -1.29
FOXN3-203ENST00000553353 ACTN4O43707 911 aaKnown RBP6.99□□□□□ -1.29
FOXN3-203ENST00000553353 ANKLE1Q8NAG6 615 aa6.99□□□□□ -1.29
FOXN3-203ENST00000553353 RTN4Q9NQC3 1192 aaKnown RBP6.99□□□□□ -1.29
FOXN3-203ENST00000553353 ADGRG1Q9Y653 693 aa6.99□□□□□ -1.29
FOXN3-203ENST00000553353 CFTRP13569 1480 aa6.98□□□□□ -1.29
FOXN3-203ENST00000553353 RCCD1A6NED2 376 aa6.97□□□□□ -1.29
FOXN3-203ENST00000553353 PRR20EP86478 221 aa6.97□□□□□ -1.29
FOXN3-203ENST00000553353 PRR20CP86479 221 aa6.97□□□□□ -1.29
FOXN3-203ENST00000553353 PRR20DP86480 221 aa6.97□□□□□ -1.29
FOXN3-203ENST00000553353 PRR20BP86481 221 aa6.97□□□□□ -1.29
FOXN3-203ENST00000553353 PRR20AP86496 221 aa6.97□□□□□ -1.29
FOXN3-203ENST00000553353 SPRYD7Q5W111 196 aa6.97□□□□□ -1.29
FOXN3-203ENST00000553353 ZNF598Q86UK7 904 aaKnown RBP6.97□□□□□ -1.29
FOXN3-203ENST00000553353 KCNV2Q8TDN2 545 aa6.97□□□□□ -1.29
FOXN3-203ENST00000553353 MROH2BQ7Z745 1585 aa6.96□□□□□ -1.29
FOXN3-203ENST00000553353 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.96□□□□□ -1.3
FOXN3-203ENST00000553353 NUTM2FA1L443 756 aa6.96□□□□□ -1.3
FOXN3-203ENST00000553353 NR1I2O75469 434 aa6.96□□□□□ -1.3
FOXN3-203ENST00000553353 DGAT1O75907 488 aa6.96□□□□□ -1.3
FOXN3-203ENST00000553353 TRIM67Q6ZTA4 783 aa6.96□□□□□ -1.3
FOXN3-203ENST00000553353 CFHP08603 1231 aa6.95□□□□□ -1.3
FOXN3-203ENST00000553353 PKDCCQ504Y2 493 aa6.95□□□□□ -1.3
FOXN3-203ENST00000553353 RSPH4AQ5TD94 716 aa6.95□□□□□ -1.3
FOXN3-203ENST00000553353 P3H3Q8IVL6 736 aa6.95□□□□□ -1.3
FOXN3-203ENST00000553353 IFT140Q96RY7 1462 aa6.94□□□□□ -1.3
FOXN3-203ENST00000553353 TLL1O43897 1013 aa6.94□□□□□ -1.3
FOXN3-203ENST00000553353 FCHSD2O94868 740 aa6.94□□□□□ -1.3
FOXN3-203ENST00000553353 ADH1BP00325 375 aa6.94□□□□□ -1.3
FOXN3-203ENST00000553353 OATP04181 439 aa6.94□□□□□ -1.3
FOXN3-203ENST00000553353 EMID1Q96A84 441 aaPredicted RBP6.94□□□□□ -1.3
FOXN3-203ENST00000553353 S1PR4O95977 384 aa6.93□□□□□ -1.3
FOXN3-203ENST00000553353 TSHZ2Q9NRE2 1034 aa6.93□□□□□ -1.3
FOXN3-203ENST00000553353 SLC10A3P09131 477 aa6.92□□□□□ -1.3
FOXN3-203ENST00000553353 MYT1Q01538 1121 aa6.91□□□□□ -1.3
FOXN3-203ENST00000553353 ZNF697Q5TEC3 545 aa6.91□□□□□ -1.3
FOXN3-203ENST00000553353 LIAT1Q6ZQX7 453 aa6.91□□□□□ -1.3
FOXN3-203ENST00000553353 PXYLP1Q8TE99 480 aa6.91□□□□□ -1.3
FOXN3-203ENST00000553353 ZNF775Q96BV0 537 aaPredicted RBP6.91□□□□□ -1.3
FOXN3-203ENST00000553353 SLC6A16Q9GZN6 736 aa6.91□□□□□ -1.3
FOXN3-203ENST00000553353 PPEF1O14829 653 aaPredicted RBP6.9□□□□□ -1.3
FOXN3-203ENST00000553353 FAM161AQ3B820 660 aa6.9□□□□□ -1.3
FOXN3-203ENST00000553353 LMOD2Q6P5Q4 547 aa6.9□□□□□ -1.3
FOXN3-203ENST00000553353 SCUBE3Q8IX30 993 aa6.9□□□□□ -1.3
FOXN3-203ENST00000553353 GDF9O60383 454 aa6.89□□□□□ -1.31
FOXN3-203ENST00000553353 HIC1Q14526 733 aa6.89□□□□□ -1.31
FOXN3-203ENST00000553353 AQRO60306 1485 aaKnown RBP eCLIP6.89□□□□□ -1.317e-7■□□□□ 11.1
FOXN3-203ENST00000553353 CLASP1Q7Z460 1538 aa6.89□□□□□ -1.31
FOXN3-203ENST00000553353 SPSB2Q99619 263 aa6.88□□□□□ -1.31
FOXN3-203ENST00000553353 FAM187AA6NFU0 413 aa6.87□□□□□ -1.31
FOXN3-203ENST00000553353 METTL3Q86U44 580 aaKnown RBP6.87□□□□□ -1.31
FOXN3-203ENST00000553353 SEMA3EO15041 775 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms