RNA–Protein interactions for RNA: ENST00000553237.5

CDK4-215, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 952 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-215ENST00000553237 HDGFP51858 240 aaKnown RBP24.02■■□□□ 1.44
CDK4-215ENST00000553237 NUTM2DQ5VT03 806 aaPredicted RBP24.01■■□□□ 1.43
CDK4-215ENST00000553237 TMEM131LA2VDJ0 1609 aa24.01■■□□□ 1.43
CDK4-215ENST00000553237 ZFYVE9O95405 1425 aa24.01■■□□□ 1.43
CDK4-215ENST00000553237 MYO5BQ9ULV0 1848 aa24■■□□□ 1.43
CDK4-215ENST00000553237 HSPA1LP34931 641 aa24■■□□□ 1.43
CDK4-215ENST00000553237 DISP3Q9P2K9 1392 aa24■■□□□ 1.43
CDK4-215ENST00000553237 KCNA6P17658 529 aa23.99■■□□□ 1.43
CDK4-215ENST00000553237 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.97■■□□□ 1.43
CDK4-215ENST00000553237 TRIM52Q96A61 297 aa23.97■■□□□ 1.43
CDK4-215ENST00000553237 ALKQ9UM73 1620 aa23.96■■□□□ 1.43
CDK4-215ENST00000553237 PLEKHG1Q9ULL1 1385 aa23.96■■□□□ 1.43
CDK4-215ENST00000553237 RBM33Q96EV2 1170 aaKnown RBP23.96■■□□□ 1.43
CDK4-215ENST00000553237 PROSER2Q86WR7 435 aaPredicted RBP23.95■■□□□ 1.42
CDK4-215ENST00000553237 HFM1A2PYH4 1435 aa23.93■■□□□ 1.42
CDK4-215ENST00000553237 TMEM94Q12767 1356 aa23.92■■□□□ 1.42
CDK4-215ENST00000553237 ZNF326Q5BKZ1 582 aaKnown RBP23.89■■□□□ 1.41
CDK4-215ENST00000553237 TBX22Q9Y458 520 aa23.89■■□□□ 1.41
CDK4-215ENST00000553237 SPHKAPQ2M3C7 1700 aa23.88■■□□□ 1.41
CDK4-215ENST00000553237 XIRP1Q702N8 1843 aaKnown RBP23.88■■□□□ 1.41
CDK4-215ENST00000553237 SLC4A1APQ9BWU0 796 aaKnown RBP23.87■■□□□ 1.41
CDK4-215ENST00000553237 ADAMTS13Q76LX8 1427 aa23.85■■□□□ 1.41
CDK4-215ENST00000553237 NWD1Q149M9 1564 aa23.83■■□□□ 1.41
CDK4-215ENST00000553237 NKTRP30414 1462 aaKnown RBP23.83■■□□□ 1.41
CDK4-215ENST00000553237 ILDR2Q71H61 639 aa23.83■■□□□ 1.41
CDK4-215ENST00000553237 CLTCL1P53675 1640 aa23.81■■□□□ 1.4
CDK4-215ENST00000553237 TRPM2O94759 1503 aa23.8■■□□□ 1.4
CDK4-215ENST00000553237 CHD2O14647 1828 aaKnown RBP23.8■■□□□ 1.4
CDK4-215ENST00000553237 FOXD1Q16676 465 aa23.79■■□□□ 1.4
CDK4-215ENST00000553237 MSH6P52701 1360 aa23.78■■□□□ 1.4
CDK4-215ENST00000553237 C14orf37Q86TY3 774 aa23.76■■□□□ 1.39
CDK4-215ENST00000553237 AMOTL2Q9Y2J4 779 aa23.76■■□□□ 1.39
CDK4-215ENST00000553237 PIK3R4Q99570 1358 aa23.76■■□□□ 1.39
CDK4-215ENST00000553237 DIP2AQ14689 1571 aa23.75■■□□□ 1.39
CDK4-215ENST00000553237 FAM135BQ49AJ0 1406 aa23.74■■□□□ 1.39
CDK4-215ENST00000553237 PTPRUQ92729 1446 aa23.74■■□□□ 1.39
CDK4-215ENST00000553237 SLAIN2Q9P270 581 aa23.72■■□□□ 1.39
CDK4-215ENST00000553237 NEXMIFQ5QGS0 1516 aa23.71■■□□□ 1.39
CDK4-215ENST00000553237 MPHOSPH9Q99550 1183 aa23.71■■□□□ 1.39
CDK4-215ENST00000553237 KIF1BO60333 1816 aa23.7■■□□□ 1.39
CDK4-215ENST00000553237 NRXN3Q9Y4C0 1643 aa23.7■■□□□ 1.38
CDK4-215ENST00000553237 MED1Q15648 1581 aaPredicted RBP23.69■■□□□ 1.38
CDK4-215ENST00000553237 SETBP1Q9Y6X0 1596 aa23.69■■□□□ 1.38
CDK4-215ENST00000553237 METP08581 1390 aa23.69■■□□□ 1.38
CDK4-215ENST00000553237 NCOA3Q9Y6Q9 1424 aa23.67■■□□□ 1.38
CDK4-215ENST00000553237 VGFO15240 615 aaPredicted RBP23.67■■□□□ 1.38
CDK4-215ENST00000553237 C19orf44Q9H6X5 657 aa23.67■■□□□ 1.38
CDK4-215ENST00000553237 ROBO1Q9Y6N7 1651 aa23.66■■□□□ 1.38
CDK4-215ENST00000553237 SETD5Q9C0A6 1442 aa23.66■■□□□ 1.38
CDK4-215ENST00000553237 RPGRIP1LQ68CZ1 1315 aa23.64■■□□□ 1.38
CDK4-215ENST00000553237 ATF3P18847 181 aa23.64■■□□□ 1.37
CDK4-215ENST00000553237 CADPS2Q86UW7 1296 aa23.63■■□□□ 1.37
CDK4-215ENST00000553237 PHF23Q9BUL5 403 aaPredicted RBP23.63■■□□□ 1.37
CDK4-215ENST00000553237 RGL3Q3MIN7 710 aa23.62■■□□□ 1.37
CDK4-215ENST00000553237 CCDC144AA2RUR9 1427 aa23.61■■□□□ 1.37
CDK4-215ENST00000553237 XRN1Q8IZH2 1706 aaKnown RBP23.59■■□□□ 1.37
CDK4-215ENST00000553237 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.59■■□□□ 1.37
CDK4-215ENST00000553237 SOCS7O14512 581 aa23.59■■□□□ 1.37
CDK4-215ENST00000553237 RAB3GAP2Q9H2M9 1393 aa23.58■■□□□ 1.37
CDK4-215ENST00000553237 ACIN1Q9UKV3 1341 aaKnown RBP23.57■■□□□ 1.36
CDK4-215ENST00000553237 ADGRF5Q8IZF2 1346 aa23.55■■□□□ 1.36
CDK4-215ENST00000553237 PPLO60437 1756 aa23.53■■□□□ 1.36
CDK4-215ENST00000553237 SPATA31E1Q6ZUB1 1445 aa23.53■■□□□ 1.36
CDK4-215ENST00000553237 PHLPP1O60346 1717 aa23.51■■□□□ 1.35
CDK4-215ENST00000553237 BRINP3Q76B58 766 aa23.51■■□□□ 1.35
CDK4-215ENST00000553237 ROBO2Q9HCK4 1378 aa23.5■■□□□ 1.35
CDK4-215ENST00000553237 DCCP43146 1447 aa23.5■■□□□ 1.35
CDK4-215ENST00000553237 SETD1AO15047 1707 aaKnown RBP23.48■■□□□ 1.35
CDK4-215ENST00000553237 ANKRD30BQ9BXX2 1392 aa23.48■■□□□ 1.35
CDK4-215ENST00000553237 ADGRL3Q9HAR2 1447 aa23.48■■□□□ 1.35
CDK4-215ENST00000553237 JCADQ9P266 1359 aa23.47■■□□□ 1.35
CDK4-215ENST00000553237 MST1RQ04912 1400 aa23.46■■□□□ 1.35
CDK4-215ENST00000553237 RGS17Q9UGC6 210 aaPredicted RBP23.46■■□□□ 1.35
CDK4-215ENST00000553237 PTCH1Q13635 1447 aa23.45■■□□□ 1.34
CDK4-215ENST00000553237 STK26Q9P289 416 aa23.45■■□□□ 1.34
CDK4-215ENST00000553237 COL16A1Q07092 1604 aaPredicted RBP23.44■■□□□ 1.34
CDK4-215ENST00000553237 TMEM132EQ6IEE7 984 aa23.43■■□□□ 1.34
CDK4-215ENST00000553237 NALCNQ8IZF0 1738 aa23.42■■□□□ 1.34
CDK4-215ENST00000553237 AHDC1Q5TGY3 1603 aaPredicted RBP23.41■■□□□ 1.34
CDK4-215ENST00000553237 DDX17Q92841 729 aaKnown RBP23.41■■□□□ 1.34
CDK4-215ENST00000553237 ASXL1Q8IXJ9 1541 aa23.4■■□□□ 1.34
CDK4-215ENST00000553237 IFT172Q9UG01 1749 aa23.39■■□□□ 1.34
CDK4-215ENST00000553237 HRCP23327 699 aa23.38■■□□□ 1.33
CDK4-215ENST00000553237 WAPLQ7Z5K2 1190 aa23.38■■□□□ 1.33
CDK4-215ENST00000553237 PIK3C2GO75747 1445 aa23.38■■□□□ 1.33
CDK4-215ENST00000553237 PRAG1Q86YV5 1406 aa23.38■■□□□ 1.33
CDK4-215ENST00000553237 C1orf167Q5SNV9 1468 aa23.36■■□□□ 1.33
CDK4-215ENST00000553237 LRPPRCP42704 1394 aaKnown RBP23.36■■□□□ 1.33
CDK4-215ENST00000553237 CFAP70Q5T0N1 1121 aa23.35■■□□□ 1.33
CDK4-215ENST00000553237 POTEAQ6S8J7 498 aa23.35■■□□□ 1.33
CDK4-215ENST00000553237 ORAI2Q96SN7 254 aa23.35■■□□□ 1.33
CDK4-215ENST00000553237 SPATA31A6Q5VVP1 1343 aa23.34■■□□□ 1.33
CDK4-215ENST00000553237 C14orf93Q9H972 538 aaKnown RBP23.34■■□□□ 1.33
CDK4-215ENST00000553237 ABCC11Q96J66 1382 aa23.33■■□□□ 1.33
CDK4-215ENST00000553237 NUTM2BA6NNL0 878 aaPredicted RBP23.33■■□□□ 1.33
CDK4-215ENST00000553237 NUTM2EB1AL46 878 aaPredicted RBP23.33■■□□□ 1.33
CDK4-215ENST00000553237 MEX3CQ5U5Q3 659 aaKnown RBP23.33■■□□□ 1.33
CDK4-215ENST00000553237 NUTM2AQ8IVF1 878 aaPredicted RBP23.33■■□□□ 1.33
CDK4-215ENST00000553237 PLEKHH1Q9ULM0 1364 aa23.31■■□□□ 1.32
CDK4-215ENST00000553237 LRP6O75581 1613 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 108.6 ms