RNA–Protein interactions for RNA: ENST00000552545.1

AC055716.2-201, humanhuman

BASIC

Gene AC055716.2, Length 2,441 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055716.2-201ENST00000552545 SETD1BQ9UPS6 1966 aaKnown RBP12.39□□□□□ -0.43
AC055716.2-201ENST00000552545 NLRP1Q9C000 1473 aa12.38□□□□□ -0.43
AC055716.2-201ENST00000552545 MYO3AQ8NEV4 1616 aa12.38□□□□□ -0.43
AC055716.2-201ENST00000552545 UBR1Q8IWV7 1749 aa12.38□□□□□ -0.43
AC055716.2-201ENST00000552545 A2ML1A8K2U0 1454 aa12.38□□□□□ -0.43
AC055716.2-201ENST00000552545 PRAG1Q86YV5 1406 aa12.38□□□□□ -0.43
AC055716.2-201ENST00000552545 VGFO15240 615 aaPredicted RBP12.38□□□□□ -0.43
AC055716.2-201ENST00000552545 HIRIP3Q9BW71 556 aaPredicted RBP12.37□□□□□ -0.43
AC055716.2-201ENST00000552545 BCANQ96GW7 911 aa12.37□□□□□ -0.43
AC055716.2-201ENST00000552545 STAC3Q96MF2 364 aa12.37□□□□□ -0.43
AC055716.2-201ENST00000552545 NEXMIFQ5QGS0 1516 aa12.37□□□□□ -0.43
AC055716.2-201ENST00000552545 UHRF1BP1Q6BDS2 1440 aa12.36□□□□□ -0.43
AC055716.2-201ENST00000552545 ROCK2O75116 1388 aaKnown RBP12.35□□□□□ -0.43
AC055716.2-201ENST00000552545 RIMS2Q9UQ26 1411 aa12.35□□□□□ -0.43
AC055716.2-201ENST00000552545 NBPF1Q3BBV0 1214 aa12.35□□□□□ -0.43
AC055716.2-201ENST00000552545 THEMISQ8N1K5 641 aaPredicted RBP12.35□□□□□ -0.43
AC055716.2-201ENST00000552545 CARD11Q9BXL7 1154 aa12.35□□□□□ -0.43
AC055716.2-201ENST00000552545 HDGFP51858 240 aaKnown RBP12.35□□□□□ -0.43
AC055716.2-201ENST00000552545 CFAP70Q5T0N1 1121 aa12.35□□□□□ -0.43
AC055716.2-201ENST00000552545 TRPM1Q7Z4N2 1603 aa12.34□□□□□ -0.43
AC055716.2-201ENST00000552545 MYOM2P54296 1465 aa12.34□□□□□ -0.43
AC055716.2-201ENST00000552545 CEP170BQ9Y4F5 1589 aaPredicted RBP12.34□□□□□ -0.43
AC055716.2-201ENST00000552545 KDM5AP29375 1690 aaKnown RBP12.33□□□□□ -0.44
AC055716.2-201ENST00000552545 TXNDC2Q86VQ3 553 aa12.33□□□□□ -0.44
AC055716.2-201ENST00000552545 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.33□□□□□ -0.44
AC055716.2-201ENST00000552545 TMEM2Q9UHN6 1383 aa12.32□□□□□ -0.44
AC055716.2-201ENST00000552545 DAXXQ9UER7 740 aaPredicted RBP12.32□□□□□ -0.44
AC055716.2-201ENST00000552545 EID1Q9Y6B2 187 aa12.32□□□□□ -0.44
AC055716.2-201ENST00000552545 RALGAPBQ86X10 1494 aa12.32□□□□□ -0.44
AC055716.2-201ENST00000552545 ZNF316A6NFI3 1004 aaPredicted RBP12.31□□□□□ -0.44
AC055716.2-201ENST00000552545 EIF4G2P78344 907 aaKnown RBP eCLIP12.31□□□□□ -0.44
AC055716.2-201ENST00000552545 HSPA5P11021 654 aaKnown RBP12.3□□□□□ -0.44
AC055716.2-201ENST00000552545 LTKP29376 864 aa12.3□□□□□ -0.44
AC055716.2-201ENST00000552545 ZNF142P52746 1687 aaPredicted RBP12.3□□□□□ -0.44
AC055716.2-201ENST00000552545 TMEM132EQ6IEE7 984 aa12.3□□□□□ -0.44
AC055716.2-201ENST00000552545 PIK3C2GO75747 1445 aa12.3□□□□□ -0.44
AC055716.2-201ENST00000552545 ZFYVE9O95405 1425 aa12.3□□□□□ -0.44
AC055716.2-201ENST00000552545 NRXN1Q9ULB1 1477 aa12.29□□□□□ -0.44
AC055716.2-201ENST00000552545 C14orf93Q9H972 538 aaKnown RBP12.29□□□□□ -0.44
AC055716.2-201ENST00000552545 KIAA1210Q9ULL0 1709 aa12.28□□□□□ -0.44
AC055716.2-201ENST00000552545 USP47Q96K76 1375 aa12.28□□□□□ -0.44
AC055716.2-201ENST00000552545 ANKLE2Q86XL3 938 aa12.27□□□□□ -0.44
AC055716.2-201ENST00000552545 STK26Q9P289 416 aa12.27□□□□□ -0.45
AC055716.2-201ENST00000552545 SLIT1O75093 1534 aa12.26□□□□□ -0.45
AC055716.2-201ENST00000552545 IQGAP1P46940 1657 aa12.26□□□□□ -0.45
AC055716.2-201ENST00000552545 HSPA2P54652 639 aa12.26□□□□□ -0.45
AC055716.2-201ENST00000552545 SLC26A8Q96RN1 970 aa12.26□□□□□ -0.45
AC055716.2-201ENST00000552545 TRAK1Q9UPV9 953 aa12.26□□□□□ -0.45
AC055716.2-201ENST00000552545 ALKQ9UM73 1620 aa12.25□□□□□ -0.45
AC055716.2-201ENST00000552545 ST20-MTHFSA0A0A6YYL1 179 aa12.25□□□□□ -0.45
AC055716.2-201ENST00000552545 ARHGAP23Q9P227 1491 aa12.25□□□□□ -0.45
AC055716.2-201ENST00000552545 LAMC1P11047 1609 aa12.25□□□□□ -0.45
AC055716.2-201ENST00000552545 SCAF11Q99590 1463 aaKnown RBP12.24□□□□□ -0.45
AC055716.2-201ENST00000552545 GPRASP1Q5JY77 1395 aa12.24□□□□□ -0.45
AC055716.2-201ENST00000552545 NCKAP5LQ9HCH0 1330 aa12.23□□□□□ -0.45
AC055716.2-201ENST00000552545 PLEKHG1Q9ULL1 1385 aa12.23□□□□□ -0.45
AC055716.2-201ENST00000552545 POLR3GLQ9BT43 218 aa12.22□□□□□ -0.45
AC055716.2-201ENST00000552545 NRXN3Q9Y4C0 1643 aa12.22□□□□□ -0.45
AC055716.2-201ENST00000552545 SETBP1Q9Y6X0 1596 aa12.22□□□□□ -0.45
AC055716.2-201ENST00000552545 SAFB2Q14151 953 aaKnown RBP eCLIP12.21□□□□□ -0.46
AC055716.2-201ENST00000552545 ADGRB1O14514 1584 aa12.21□□□□□ -0.46
AC055716.2-201ENST00000552545 POLR1AO95602 1720 aaPredicted RBP12.21□□□□□ -0.46
AC055716.2-201ENST00000552545 METP08581 1390 aa12.2□□□□□ -0.46
AC055716.2-201ENST00000552545 EIF3AQ14152 1382 aaKnown RBP12.2□□□□□ -0.46
AC055716.2-201ENST00000552545 SETD1AO15047 1707 aaKnown RBP12.19□□□□□ -0.46
AC055716.2-201ENST00000552545 ASXL1Q8IXJ9 1541 aa12.19□□□□□ -0.46
AC055716.2-201ENST00000552545 ADAMTS13Q76LX8 1427 aa12.19□□□□□ -0.46
AC055716.2-201ENST00000552545 YTHDC2Q9H6S0 1430 aaKnown RBP12.19□□□□□ -0.46
AC055716.2-201ENST00000552545 LMTK3Q96Q04 1460 aa12.18□□□□□ -0.46
AC055716.2-201ENST00000552545 POGKQ9P215 609 aa12.18□□□□□ -0.46
AC055716.2-201ENST00000552545 NPHP4O75161 1426 aaPredicted RBP12.17□□□□□ -0.46
AC055716.2-201ENST00000552545 C11orf95C9JLR9 678 aaPredicted RBP12.17□□□□□ -0.46
AC055716.2-201ENST00000552545 TBX22Q9Y458 520 aa12.17□□□□□ -0.46
AC055716.2-201ENST00000552545 CENPJQ9HC77 1338 aaPredicted RBP12.17□□□□□ -0.46
AC055716.2-201ENST00000552545 ARHGEF28Q8N1W1 1705 aaKnown RBP12.16□□□□□ -0.46
AC055716.2-201ENST00000552545 PRAM1Q96QH2 718 aa12.16□□□□□ -0.46
AC055716.2-201ENST00000552545 DDX10Q13206 875 aaKnown RBP12.16□□□□□ -0.46
AC055716.2-201ENST00000552545 WAPLQ7Z5K2 1190 aa12.16□□□□□ -0.46
AC055716.2-201ENST00000552545 AMOTL2Q9Y2J4 779 aa12.16□□□□□ -0.46
AC055716.2-201ENST00000552545 QRICH2Q9H0J4 1663 aa12.15□□□□□ -0.46
AC055716.2-201ENST00000552545 LRPPRCP42704 1394 aaKnown RBP12.15□□□□□ -0.46
AC055716.2-201ENST00000552545 TMF1P82094 1093 aa12.15□□□□□ -0.47
AC055716.2-201ENST00000552545 TESK2Q96S53 571 aa12.15□□□□□ -0.47
AC055716.2-201ENST00000552545 WASHC2AQ641Q2 1341 aa12.14□□□□□ -0.47
AC055716.2-201ENST00000552545 MED14O60244 1454 aa12.14□□□□□ -0.47
AC055716.2-201ENST00000552545 DIP2AQ14689 1571 aa12.14□□□□□ -0.47
AC055716.2-201ENST00000552545 MINK1Q8N4C8 1332 aaPredicted RBP12.14□□□□□ -0.47
AC055716.2-201ENST00000552545 KIF7Q2M1P5 1343 aa12.13□□□□□ -0.47
AC055716.2-201ENST00000552545 RTN4Q9NQC3 1192 aaKnown RBP12.13□□□□□ -0.47
AC055716.2-201ENST00000552545 ABCC11Q96J66 1382 aa12.13□□□□□ -0.47
AC055716.2-201ENST00000552545 DIEXFQ68CQ4 756 aaKnown RBP12.12□□□□□ -0.47
AC055716.2-201ENST00000552545 AEBP2Q6ZN18 517 aaPredicted RBP12.12□□□□□ -0.47
AC055716.2-201ENST00000552545 PTPRUQ92729 1446 aa12.12□□□□□ -0.47
AC055716.2-201ENST00000552545 CCDC7Q96M83 1385 aa12.12□□□□□ -0.47
AC055716.2-201ENST00000552545 DISP3Q9P2K9 1392 aa12.12□□□□□ -0.47
AC055716.2-201ENST00000552545 STRCQ7RTU9 1775 aa12.12□□□□□ -0.47
AC055716.2-201ENST00000552545 PLEKHH1Q9ULM0 1364 aa12.12□□□□□ -0.47
AC055716.2-201ENST00000552545 KCNA6P17658 529 aa12.11□□□□□ -0.47
AC055716.2-201ENST00000552545 CHD2O14647 1828 aaKnown RBP12.11□□□□□ -0.47
AC055716.2-201ENST00000552545 KNDC1Q76NI1 1749 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms