RNA–Protein interactions for RNA: ENST00000552215.5

CHPT1-208, Transcript of choline phosphotransferase 1, humanhuman

TSL 1 (best)

Gene CHPT1, Length 4,342 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-208ENST00000552215 ESCO1Q5FWF5 840 aa11.02□□□□□ -0.65
CHPT1-208ENST00000552215 CABP1Q9NZU7 370 aa11.02□□□□□ -0.65
CHPT1-208ENST00000552215 ZFYVE16Q7Z3T8 1539 aa11.01□□□□□ -0.65
CHPT1-208ENST00000552215 NPATQ14207 1427 aa11.01□□□□□ -0.65
CHPT1-208ENST00000552215 CDK19Q9BWU1 502 aa11□□□□□ -0.65
CHPT1-208ENST00000552215 HDGFL2Q7Z4V5 671 aaPredicted RBP10.99□□□□□ -0.65
CHPT1-208ENST00000552215 MYT1Q01538 1121 aa10.99□□□□□ -0.65
CHPT1-208ENST00000552215 SHANK2Q9UPX8 1470 aa10.99□□□□□ -0.65
CHPT1-208ENST00000552215 EVC2Q86UK5 1308 aa10.98□□□□□ -0.65
CHPT1-208ENST00000552215 RPRD2Q5VT52 1461 aaKnown RBP10.98□□□□□ -0.65
CHPT1-208ENST00000552215 CCDC146Q8IYE0 955 aa10.98□□□□□ -0.65
CHPT1-208ENST00000552215 ADGRL2O95490 1459 aa10.98□□□□□ -0.65
CHPT1-208ENST00000552215 PSME1Q06323 249 aa10.98□□□□□ -0.65
CHPT1-208ENST00000552215 ABCA9Q8IUA7 1624 aa10.97□□□□□ -0.65
CHPT1-208ENST00000552215 NEFLP07196 543 aa10.97□□□□□ -0.65
CHPT1-208ENST00000552215 FOXO3O43524 673 aa10.97□□□□□ -0.65
CHPT1-208ENST00000552215 ATF3P18847 181 aa10.97□□□□□ -0.65
CHPT1-208ENST00000552215 DIP2BQ9P265 1576 aa10.97□□□□□ -0.65
CHPT1-208ENST00000552215 KCNA6P17658 529 aa10.97□□□□□ -0.65
CHPT1-208ENST00000552215 NEFMP07197 916 aa10.96□□□□□ -0.65
CHPT1-208ENST00000552215 CCDC184Q52MB2 194 aa10.96□□□□□ -0.65
CHPT1-208ENST00000552215 LAS1LQ9Y4W2 734 aaKnown RBP10.96□□□□□ -0.65
CHPT1-208ENST00000552215 MLH3Q9UHC1 1453 aa10.96□□□□□ -0.65
CHPT1-208ENST00000552215 EIF3AQ14152 1382 aaKnown RBP10.96□□□□□ -0.66
CHPT1-208ENST00000552215 DDX17Q92841 729 aaKnown RBP10.95□□□□□ -0.66
CHPT1-208ENST00000552215 C14orf93Q9H972 538 aaKnown RBP10.95□□□□□ -0.66
CHPT1-208ENST00000552215 RRP7AQ9Y3A4 280 aaKnown RBP10.95□□□□□ -0.66
CHPT1-208ENST00000552215 TERF2IPQ9NYB0 399 aa10.94□□□□□ -0.66
CHPT1-208ENST00000552215 PPP6R1Q9UPN7 881 aa10.94□□□□□ -0.66
CHPT1-208ENST00000552215 CCDC7Q96M83 1385 aa10.94□□□□□ -0.66
CHPT1-208ENST00000552215 ARHGEF5Q12774 1597 aa10.94□□□□□ -0.66
CHPT1-208ENST00000552215 USP35Q9P2H5 1018 aa10.94□□□□□ -0.66
CHPT1-208ENST00000552215 RIMS2Q9UQ26 1411 aa10.93□□□□□ -0.66
CHPT1-208ENST00000552215 U2AF1L5P0DN76 240 aaPredicted RBP10.93□□□□□ -0.66
CHPT1-208ENST00000552215 U2AF1Q01081 240 aaKnown RBP eCLIP10.93□□□□□ -0.66
CHPT1-208ENST00000552215 HECW2Q9P2P5 1572 aa10.93□□□□□ -0.66
CHPT1-208ENST00000552215 PLA2R1Q13018 1463 aa10.92□□□□□ -0.66
CHPT1-208ENST00000552215 CCDC9Q9Y3X0 531 aaKnown RBP10.92□□□□□ -0.66
CHPT1-208ENST00000552215 NLRP6P59044 892 aa10.92□□□□□ -0.66
CHPT1-208ENST00000552215 CSB-PGBD3P0DP91 1061 aa10.92□□□□□ -0.66
CHPT1-208ENST00000552215 NUTM2BA6NNL0 878 aaPredicted RBP10.91□□□□□ -0.66
CHPT1-208ENST00000552215 NUTM2EB1AL46 878 aaPredicted RBP10.91□□□□□ -0.66
CHPT1-208ENST00000552215 NUTM2AQ8IVF1 878 aaPredicted RBP10.91□□□□□ -0.66
CHPT1-208ENST00000552215 NUDT16Q96DE0 195 aaKnown RBP10.91□□□□□ -0.66
CHPT1-208ENST00000552215 RPGRIP1LQ68CZ1 1315 aa10.91□□□□□ -0.66
CHPT1-208ENST00000552215 PRKRIP1Q9H875 184 aaPredicted RBP10.91□□□□□ -0.66
CHPT1-208ENST00000552215 ZRANB1Q9UGI0 708 aa10.91□□□□□ -0.66
CHPT1-208ENST00000552215 GTF3C3Q9Y5Q9 886 aa10.9□□□□□ -0.66
CHPT1-208ENST00000552215 PRDM15P57071 1507 aaPredicted RBP10.9□□□□□ -0.66
CHPT1-208ENST00000552215 ABTB2Q8N961 1025 aa10.9□□□□□ -0.66
CHPT1-208ENST00000552215 DISP3Q9P2K9 1392 aa10.9□□□□□ -0.66
CHPT1-208ENST00000552215 PHF23Q9BUL5 403 aaPredicted RBP10.9□□□□□ -0.66
CHPT1-208ENST00000552215 AMPHP49418 695 aa10.9□□□□□ -0.67
CHPT1-208ENST00000552215 RRS1Q15050 365 aaKnown RBP10.9□□□□□ -0.67
CHPT1-208ENST00000552215 KTN1Q86UP2 1357 aaKnown RBP10.89□□□□□ -0.67
CHPT1-208ENST00000552215 CFAP53Q96M91 514 aa10.89□□□□□ -0.67
CHPT1-208ENST00000552215 ZC3H6P61129 1189 aaKnown RBP10.88□□□□□ -0.67
CHPT1-208ENST00000552215 HMOX1P09601 288 aa10.88□□□□□ -0.67
CHPT1-208ENST00000552215 NME9Q86XW9 330 aa10.88□□□□□ -0.67
CHPT1-208ENST00000552215 PLEKHH1Q9ULM0 1364 aa10.87□□□□□ -0.67
CHPT1-208ENST00000552215 COG3Q96JB2 828 aa10.87□□□□□ -0.67
CHPT1-208ENST00000552215 ARXQ96QS3 562 aa10.87□□□□□ -0.67
CHPT1-208ENST00000552215 MAST1Q9Y2H9 1570 aa10.87□□□□□ -0.67
CHPT1-208ENST00000552215 KDM4FA0A1W2PPD8 638 aa10.87□□□□□ -0.67
CHPT1-208ENST00000552215 CABLES1Q8TDN4 633 aa10.87□□□□□ -0.67
CHPT1-208ENST00000552215 PRAG1Q86YV5 1406 aa10.86□□□□□ -0.67
CHPT1-208ENST00000552215 CANXP27824 592 aaKnown RBP10.86□□□□□ -0.67
CHPT1-208ENST00000552215 ORAI2Q96SN7 254 aa10.86□□□□□ -0.67
CHPT1-208ENST00000552215 METP08581 1390 aa10.86□□□□□ -0.67
CHPT1-208ENST00000552215 MTHFSP49914 203 aa10.85□□□□□ -0.67
CHPT1-208ENST00000552215 KIDINS220Q9ULH0 1771 aa10.85□□□□□ -0.67
CHPT1-208ENST00000552215 WASLO00401 505 aaPredicted RBP10.85□□□□□ -0.67
CHPT1-208ENST00000552215 ADGBQ8N7X0 1667 aa10.85□□□□□ -0.67
CHPT1-208ENST00000552215 TESK2Q96S53 571 aa10.85□□□□□ -0.67
CHPT1-208ENST00000552215 CCDC61Q9Y6R9 512 aa10.85□□□□□ -0.67
CHPT1-208ENST00000552215 UHRF1BP1Q6BDS2 1440 aa10.85□□□□□ -0.67
CHPT1-208ENST00000552215 ABCA6Q8N139 1617 aa10.85□□□□□ -0.67
CHPT1-208ENST00000552215 ARAP3Q8WWN8 1544 aa10.84□□□□□ -0.67
CHPT1-208ENST00000552215 CGNL1Q0VF96 1302 aa10.84□□□□□ -0.67
CHPT1-208ENST00000552215 TMEM2Q9UHN6 1383 aa10.84□□□□□ -0.67
CHPT1-208ENST00000552215 ABCC3O15438 1527 aa10.84□□□□□ -0.67
CHPT1-208ENST00000552215 CFAP74Q9C0B2 1584 aa10.84□□□□□ -0.67
CHPT1-208ENST00000552215 DIP2CQ9Y2E4 1556 aa10.84□□□□□ -0.67
CHPT1-208ENST00000552215 CNTLNQ9NXG0 1405 aa10.84□□□□□ -0.67
CHPT1-208ENST00000552215 STAC3Q96MF2 364 aa10.84□□□□□ -0.67
CHPT1-208ENST00000552215 ZNF335Q9H4Z2 1342 aaPredicted RBP10.84□□□□□ -0.67
CHPT1-208ENST00000552215 MAGI2Q86UL8 1455 aa10.83□□□□□ -0.68
CHPT1-208ENST00000552215 GCC2Q8IWJ2 1684 aa10.83□□□□□ -0.68
CHPT1-208ENST00000552215 STRN4Q9NRL3 753 aa10.83□□□□□ -0.68
CHPT1-208ENST00000552215 ADAMTS2O95450 1211 aa10.83□□□□□ -0.68
CHPT1-208ENST00000552215 NUDCQ9Y266 331 aa10.83□□□□□ -0.68
CHPT1-208ENST00000552215 FKBP8Q14318 412 aa10.83□□□□□ -0.68
CHPT1-208ENST00000552215 MAPK8IP3Q9UPT6 1336 aa10.83□□□□□ -0.68
CHPT1-208ENST00000552215 ELL2O00472 640 aaPredicted RBP10.82□□□□□ -0.68
CHPT1-208ENST00000552215 UBAP1LF5GYI3 381 aa10.81□□□□□ -0.68
CHPT1-208ENST00000552215 ACEP12821 1306 aa10.81□□□□□ -0.68
CHPT1-208ENST00000552215 CHRNA2Q15822 529 aa10.8□□□□□ -0.68
CHPT1-208ENST00000552215 PHF8Q9UPP1 1060 aa10.8□□□□□ -0.68
CHPT1-208ENST00000552215 SUPT16HQ9Y5B9 1047 aaKnown RBP10.8□□□□□ -0.68
CHPT1-208ENST00000552215 ERVK-7P63135 1459 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms