RNA–Protein interactions for RNA: ENST00000552208.1

LSM6P2-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM6P2, Length 177 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P2-201ENST00000552208 PRSS12P56730 875 aa7.32□□□□□ -1.24
LSM6P2-201ENST00000552208 TMEM259Q4ZIN3 620 aa7.32□□□□□ -1.24
LSM6P2-201ENST00000552208 TRAIPQ9BWF2 469 aa7.32□□□□□ -1.24
LSM6P2-201ENST00000552208 ADAM33Q9BZ11 813 aa7.32□□□□□ -1.24
LSM6P2-201ENST00000552208 ZSWIM6Q9HCJ5 1215 aa7.32□□□□□ -1.24
LSM6P2-201ENST00000552208 DOK7Q18PE1 504 aa7.31□□□□□ -1.24
LSM6P2-201ENST00000552208 FAM198AQ9UFP1 575 aa7.31□□□□□ -1.24
LSM6P2-201ENST00000552208 SOCS7O14512 581 aa7.3□□□□□ -1.24
LSM6P2-201ENST00000552208 RIMBP2O15034 1052 aa7.3□□□□□ -1.24
LSM6P2-201ENST00000552208 SPTLC1O15269 473 aa7.3□□□□□ -1.24
LSM6P2-201ENST00000552208 MTMR14Q8NCE2 650 aa7.3□□□□□ -1.24
LSM6P2-201ENST00000552208 RBM46Q8TBY0 533 aaKnown RBP7.3□□□□□ -1.24
LSM6P2-201ENST00000552208 SPIRE2Q8WWL2 714 aa7.3□□□□□ -1.24
LSM6P2-201ENST00000552208 CDCA7LQ96GN5 454 aa7.3□□□□□ -1.24
LSM6P2-201ENST00000552208 EYA1Q99502 592 aa7.3□□□□□ -1.24
LSM6P2-201ENST00000552208 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.29□□□□□ -1.24
LSM6P2-201ENST00000552208 ZBTB7CA1YPR0 619 aa7.29□□□□□ -1.24
LSM6P2-201ENST00000552208 CD46P15529 392 aa7.29□□□□□ -1.24
LSM6P2-201ENST00000552208 RIC3Q7Z5B4 369 aa7.29□□□□□ -1.24
LSM6P2-201ENST00000552208 ZNF454Q8N9F8 522 aa7.29□□□□□ -1.24
LSM6P2-201ENST00000552208 CCDC97Q96F63 343 aaPredicted RBP7.29□□□□□ -1.24
LSM6P2-201ENST00000552208 MYT1LQ9UL68 1186 aa7.29□□□□□ -1.24
LSM6P2-201ENST00000552208 RCCD1A6NED2 376 aa7.28□□□□□ -1.24
LSM6P2-201ENST00000552208 ATP1B4Q9UN42 357 aaPredicted RBP7.28□□□□□ -1.24
LSM6P2-201ENST00000552208 ZNF330Q9Y3S2 320 aaPredicted RBP7.28□□□□□ -1.24
LSM6P2-201ENST00000552208 GJA5P36382 358 aa7.27□□□□□ -1.25
LSM6P2-201ENST00000552208 RSBN1LQ6PCB5 846 aaPredicted RBP7.27□□□□□ -1.25
LSM6P2-201ENST00000552208 NPM2Q86SE8 214 aaKnown RBP7.26□□□□□ -1.25
LSM6P2-201ENST00000552208 GDPD2Q9HCC8 539 aa7.26□□□□□ -1.25
LSM6P2-201ENST00000552208 LILRB3O75022 631 aa7.25□□□□□ -1.25
LSM6P2-201ENST00000552208 NUDT7P0C024 238 aa7.25□□□□□ -1.25
LSM6P2-201ENST00000552208 HOXB3P14651 431 aaPredicted RBP7.25□□□□□ -1.25
LSM6P2-201ENST00000552208 COL9A1P20849 921 aa7.25□□□□□ -1.25
LSM6P2-201ENST00000552208 RANGAP1P46060 587 aaPredicted RBP7.25□□□□□ -1.25
LSM6P2-201ENST00000552208 KHSRPQ92945 711 aaKnown RBP eCLIP7.25□□□□□ -1.25
LSM6P2-201ENST00000552208 C3orf80F5H4A9 247 aa7.24□□□□□ -1.25
LSM6P2-201ENST00000552208 QPCTQ16769 361 aa7.24□□□□□ -1.25
LSM6P2-201ENST00000552208 ARSIQ5FYB1 569 aa7.24□□□□□ -1.25
LSM6P2-201ENST00000552208 GPR153Q6NV75 609 aa7.24□□□□□ -1.25
LSM6P2-201ENST00000552208 TSKSQ9UJT2 592 aa7.24□□□□□ -1.25
LSM6P2-201ENST00000552208 PSDA5PKW4 1024 aaPredicted RBP7.23□□□□□ -1.25
LSM6P2-201ENST00000552208 MOXD2PA6NHM9 499 aa7.23□□□□□ -1.25
LSM6P2-201ENST00000552208 SULF1Q8IWU6 871 aa7.23□□□□□ -1.25
LSM6P2-201ENST00000552208 KCTD17Q8N5Z5 321 aa7.23□□□□□ -1.25
LSM6P2-201ENST00000552208 CCDC9Q9Y3X0 531 aaKnown RBP7.23□□□□□ -1.25
LSM6P2-201ENST00000552208 BCL2L12Q9HB09 334 aa7.22□□□□□ -1.25
LSM6P2-201ENST00000552208 PCDHB15Q9Y5E8 787 aa7.22□□□□□ -1.25
LSM6P2-201ENST00000552208 PPP1R15AO75807 674 aaPredicted RBP7.21□□□□□ -1.26
LSM6P2-201ENST00000552208 NDUFV2P19404 249 aa7.21□□□□□ -1.26
LSM6P2-201ENST00000552208 DNAJB2P25686 324 aa7.21□□□□□ -1.26
LSM6P2-201ENST00000552208 RTL5Q5HYW3 569 aaPredicted RBP7.21□□□□□ -1.26
LSM6P2-201ENST00000552208 NUTM1Q86Y26 1132 aa7.21□□□□□ -1.26
LSM6P2-201ENST00000552208 ZNF710Q8N1W2 664 aa7.21□□□□□ -1.26
LSM6P2-201ENST00000552208 RETREG2Q8NC44 543 aa7.21□□□□□ -1.26
LSM6P2-201ENST00000552208 TMEM134Q9H6X4 195 aa7.21□□□□□ -1.26
LSM6P2-201ENST00000552208 PRPF38BQ5VTL8 546 aaKnown RBP7.2□□□□□ -1.26
LSM6P2-201ENST00000552208 NUDT18Q6ZVK8 323 aa7.2□□□□□ -1.26
LSM6P2-201ENST00000552208 POM121CA8CG34 1229 aa7.19□□□□□ -1.26
LSM6P2-201ENST00000552208 DDX11L8A8MPP1 907 aa7.19□□□□□ -1.26
LSM6P2-201ENST00000552208 IRF5Q13568 498 aa7.19□□□□□ -1.26
LSM6P2-201ENST00000552208 TATDN2Q93075 761 aa7.19□□□□□ -1.26
LSM6P2-201ENST00000552208 GJD4Q96KN9 370 aaPredicted RBP7.19□□□□□ -1.26
LSM6P2-201ENST00000552208 TBC1D2BQ9UPU7 963 aa7.19□□□□□ -1.26
LSM6P2-201ENST00000552208 PPP1R3GB7ZBB8 358 aa7.18□□□□□ -1.26
LSM6P2-201ENST00000552208 GPR37L1O60883 481 aa7.18□□□□□ -1.26
LSM6P2-201ENST00000552208 AP1G2O75843 785 aa7.18□□□□□ -1.26
LSM6P2-201ENST00000552208 ABL2P42684 1182 aa7.18□□□□□ -1.26
LSM6P2-201ENST00000552208 GLMNQ92990 594 aa7.18□□□□□ -1.26
LSM6P2-201ENST00000552208 CALR3Q96L12 384 aaKnown RBP7.18□□□□□ -1.26
LSM6P2-201ENST00000552208 LHX6Q9UPM6 363 aa7.18□□□□□ -1.26
LSM6P2-201ENST00000552208 TRIM6-TRIM34B2RNG4 842 aa7.17□□□□□ -1.26
LSM6P2-201ENST00000552208 USP17L8P0C7I0 530 aa7.17□□□□□ -1.26
LSM6P2-201ENST00000552208 CSPP1Q1MSJ5 1256 aa7.17□□□□□ -1.26
LSM6P2-201ENST00000552208 WWC1Q8IX03 1113 aa7.17□□□□□ -1.26
LSM6P2-201ENST00000552208 NBPF26B4DH59 902 aa7.16□□□□□ -1.26
LSM6P2-201ENST00000552208 KDM4AO75164 1064 aa7.16□□□□□ -1.26
LSM6P2-201ENST00000552208 HOXB1P14653 301 aaPredicted RBP7.16□□□□□ -1.26
LSM6P2-201ENST00000552208 PPP4R3BQ5MIZ7 849 aa7.16□□□□□ -1.26
LSM6P2-201ENST00000552208 CABLES1Q8TDN4 633 aa7.16□□□□□ -1.26
LSM6P2-201ENST00000552208 PRM3Q9NNZ6 103 aa7.16□□□□□ -1.26
LSM6P2-201ENST00000552208 PNMA3Q9UL41 463 aa7.16□□□□□ -1.26
LSM6P2-201ENST00000552208 PTPREP23469 700 aa7.15□□□□□ -1.26
LSM6P2-201ENST00000552208 GCGRP47871 477 aa7.15□□□□□ -1.26
LSM6P2-201ENST00000552208 USP46P62068 366 aa7.15□□□□□ -1.26
LSM6P2-201ENST00000552208 SRPK2P78362 688 aaKnown RBP7.15□□□□□ -1.26
LSM6P2-201ENST00000552208 ADAMTS19Q8TE59 1207 aa7.15□□□□□ -1.26
LSM6P2-201ENST00000552208 HOXA2O43364 376 aa7.14□□□□□ -1.27
LSM6P2-201ENST00000552208 PACS2Q86VP3 889 aa7.14□□□□□ -1.27
LSM6P2-201ENST00000552208 AEBP1Q8IUX7 1158 aa7.14□□□□□ -1.27
LSM6P2-201ENST00000552208 TRIM34Q9BYJ4 488 aa7.14□□□□□ -1.27
LSM6P2-201ENST00000552208 PCDHGC3Q9UN70 934 aa7.14□□□□□ -1.27
LSM6P2-201ENST00000552208 ERBB3P21860 1342 aa7.13□□□□□ -1.27
LSM6P2-201ENST00000552208 NUTM2BA6NNL0 878 aaPredicted RBP7.13□□□□□ -1.27
LSM6P2-201ENST00000552208 NUTM2EB1AL46 878 aaPredicted RBP7.13□□□□□ -1.27
LSM6P2-201ENST00000552208 NUTM2DQ5VT03 806 aaPredicted RBP7.13□□□□□ -1.27
LSM6P2-201ENST00000552208 NUTM2AQ8IVF1 878 aaPredicted RBP7.13□□□□□ -1.27
LSM6P2-201ENST00000552208 ZBTB3Q9H5J0 574 aa7.13□□□□□ -1.27
LSM6P2-201ENST00000552208 NDUFB9Q9Y6M9 179 aa7.13□□□□□ -1.27
LSM6P2-201ENST00000552208 ACIN1Q9UKV3 1341 aaKnown RBP7.12□□□□□ -1.27
LSM6P2-201ENST00000552208 HDGFL1Q5TGJ6 251 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms