RNA–Protein interactions for RNA: ENST00000552208.1

LSM6P2-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM6P2, Length 177 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P2-201ENST00000552208 PRSS12P56730 875 aa7.32□□□□□ -1.24
LSM6P2-201ENST00000552208 TMEM259Q4ZIN3 620 aa7.32□□□□□ -1.24
LSM6P2-201ENST00000552208 TRAIPQ9BWF2 469 aa7.32□□□□□ -1.24
LSM6P2-201ENST00000552208 ADAM33Q9BZ11 813 aa7.32□□□□□ -1.24
LSM6P2-201ENST00000552208 ZSWIM6Q9HCJ5 1215 aa7.32□□□□□ -1.24
LSM6P2-201ENST00000552208 DOK7Q18PE1 504 aa7.31□□□□□ -1.24
LSM6P2-201ENST00000552208 FAM198AQ9UFP1 575 aa7.31□□□□□ -1.24
LSM6P2-201ENST00000552208 SOCS7O14512 581 aa7.3□□□□□ -1.24
LSM6P2-201ENST00000552208 RIMBP2O15034 1052 aa7.3□□□□□ -1.24
LSM6P2-201ENST00000552208 SPTLC1O15269 473 aa7.3□□□□□ -1.24
LSM6P2-201ENST00000552208 MTMR14Q8NCE2 650 aa7.3□□□□□ -1.24
LSM6P2-201ENST00000552208 RBM46Q8TBY0 533 aaKnown RBP7.3□□□□□ -1.24
LSM6P2-201ENST00000552208 SPIRE2Q8WWL2 714 aa7.3□□□□□ -1.24
LSM6P2-201ENST00000552208 CDCA7LQ96GN5 454 aa7.3□□□□□ -1.24
LSM6P2-201ENST00000552208 EYA1Q99502 592 aa7.3□□□□□ -1.24
LSM6P2-201ENST00000552208 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.29□□□□□ -1.24
LSM6P2-201ENST00000552208 ZBTB7CA1YPR0 619 aa7.29□□□□□ -1.24
LSM6P2-201ENST00000552208 CD46P15529 392 aa7.29□□□□□ -1.24
LSM6P2-201ENST00000552208 RIC3Q7Z5B4 369 aa7.29□□□□□ -1.24
LSM6P2-201ENST00000552208 ZNF454Q8N9F8 522 aa7.29□□□□□ -1.24
LSM6P2-201ENST00000552208 CCDC97Q96F63 343 aaPredicted RBP7.29□□□□□ -1.24
LSM6P2-201ENST00000552208 MYT1LQ9UL68 1186 aa7.29□□□□□ -1.24
LSM6P2-201ENST00000552208 RCCD1A6NED2 376 aa7.28□□□□□ -1.24
LSM6P2-201ENST00000552208 ATP1B4Q9UN42 357 aaPredicted RBP7.28□□□□□ -1.24
LSM6P2-201ENST00000552208 ZNF330Q9Y3S2 320 aaPredicted RBP7.28□□□□□ -1.24
LSM6P2-201ENST00000552208 GJA5P36382 358 aa7.27□□□□□ -1.25
LSM6P2-201ENST00000552208 RSBN1LQ6PCB5 846 aaPredicted RBP7.27□□□□□ -1.25
LSM6P2-201ENST00000552208 NPM2Q86SE8 214 aaKnown RBP7.26□□□□□ -1.25
LSM6P2-201ENST00000552208 GDPD2Q9HCC8 539 aa7.26□□□□□ -1.25
LSM6P2-201ENST00000552208 LILRB3O75022 631 aa7.25□□□□□ -1.25
LSM6P2-201ENST00000552208 NUDT7P0C024 238 aa7.25□□□□□ -1.25
LSM6P2-201ENST00000552208 HOXB3P14651 431 aaPredicted RBP7.25□□□□□ -1.25
LSM6P2-201ENST00000552208 COL9A1P20849 921 aa7.25□□□□□ -1.25
LSM6P2-201ENST00000552208 RANGAP1P46060 587 aaPredicted RBP7.25□□□□□ -1.25
LSM6P2-201ENST00000552208 KHSRPQ92945 711 aaKnown RBP eCLIP7.25□□□□□ -1.25
LSM6P2-201ENST00000552208 C3orf80F5H4A9 247 aa7.24□□□□□ -1.25
LSM6P2-201ENST00000552208 QPCTQ16769 361 aa7.24□□□□□ -1.25
LSM6P2-201ENST00000552208 ARSIQ5FYB1 569 aa7.24□□□□□ -1.25
LSM6P2-201ENST00000552208 GPR153Q6NV75 609 aa7.24□□□□□ -1.25
LSM6P2-201ENST00000552208 TSKSQ9UJT2 592 aa7.24□□□□□ -1.25
LSM6P2-201ENST00000552208 PSDA5PKW4 1024 aaPredicted RBP7.23□□□□□ -1.25
LSM6P2-201ENST00000552208 MOXD2PA6NHM9 499 aa7.23□□□□□ -1.25
LSM6P2-201ENST00000552208 SULF1Q8IWU6 871 aa7.23□□□□□ -1.25
LSM6P2-201ENST00000552208 KCTD17Q8N5Z5 321 aa7.23□□□□□ -1.25
LSM6P2-201ENST00000552208 CCDC9Q9Y3X0 531 aaKnown RBP7.23□□□□□ -1.25
LSM6P2-201ENST00000552208 BCL2L12Q9HB09 334 aa7.22□□□□□ -1.25
LSM6P2-201ENST00000552208 PCDHB15Q9Y5E8 787 aa7.22□□□□□ -1.25
LSM6P2-201ENST00000552208 PPP1R15AO75807 674 aaPredicted RBP7.21□□□□□ -1.26
LSM6P2-201ENST00000552208 NDUFV2P19404 249 aa7.21□□□□□ -1.26
LSM6P2-201ENST00000552208 DNAJB2P25686 324 aa7.21□□□□□ -1.26
LSM6P2-201ENST00000552208 RTL5Q5HYW3 569 aaPredicted RBP7.21□□□□□ -1.26
LSM6P2-201ENST00000552208 NUTM1Q86Y26 1132 aa7.21□□□□□ -1.26
LSM6P2-201ENST00000552208 ZNF710Q8N1W2 664 aa7.21□□□□□ -1.26
LSM6P2-201ENST00000552208 RETREG2Q8NC44 543 aa7.21□□□□□ -1.26
LSM6P2-201ENST00000552208 TMEM134Q9H6X4 195 aa7.21□□□□□ -1.26
LSM6P2-201ENST00000552208 PRPF38BQ5VTL8 546 aaKnown RBP7.2□□□□□ -1.26
LSM6P2-201ENST00000552208 NUDT18Q6ZVK8 323 aa7.2□□□□□ -1.26
LSM6P2-201ENST00000552208 POM121CA8CG34 1229 aa7.19□□□□□ -1.26
LSM6P2-201ENST00000552208 DDX11L8A8MPP1 907 aa7.19□□□□□ -1.26
LSM6P2-201ENST00000552208 IRF5Q13568 498 aa7.19□□□□□ -1.26
LSM6P2-201ENST00000552208 TATDN2Q93075 761 aa7.19□□□□□ -1.26
LSM6P2-201ENST00000552208 GJD4Q96KN9 370 aaPredicted RBP7.19□□□□□ -1.26
LSM6P2-201ENST00000552208 TBC1D2BQ9UPU7 963 aa7.19□□□□□ -1.26
LSM6P2-201ENST00000552208 PPP1R3GB7ZBB8 358 aa7.18□□□□□ -1.26
LSM6P2-201ENST00000552208 GPR37L1O60883 481 aa7.18□□□□□ -1.26
LSM6P2-201ENST00000552208 AP1G2O75843 785 aa7.18□□□□□ -1.26
LSM6P2-201ENST00000552208 ABL2P42684 1182 aa7.18□□□□□ -1.26
LSM6P2-201ENST00000552208 GLMNQ92990 594 aa7.18□□□□□ -1.26
LSM6P2-201ENST00000552208 CALR3Q96L12 384 aaKnown RBP7.18□□□□□ -1.26
LSM6P2-201ENST00000552208 LHX6Q9UPM6 363 aa7.18□□□□□ -1.26
LSM6P2-201ENST00000552208 TRIM6-TRIM34B2RNG4 842 aa7.17□□□□□ -1.26
LSM6P2-201ENST00000552208 USP17L8P0C7I0 530 aa7.17□□□□□ -1.26
LSM6P2-201ENST00000552208 CSPP1Q1MSJ5 1256 aa7.17□□□□□ -1.26
LSM6P2-201ENST00000552208 WWC1Q8IX03 1113 aa7.17□□□□□ -1.26
LSM6P2-201ENST00000552208 NBPF26B4DH59 902 aa7.16□□□□□ -1.26
LSM6P2-201ENST00000552208 KDM4AO75164 1064 aa7.16□□□□□ -1.26
LSM6P2-201ENST00000552208 HOXB1P14653 301 aaPredicted RBP7.16□□□□□ -1.26
LSM6P2-201ENST00000552208 PPP4R3BQ5MIZ7 849 aa7.16□□□□□ -1.26
LSM6P2-201ENST00000552208 CABLES1Q8TDN4 633 aa7.16□□□□□ -1.26
LSM6P2-201ENST00000552208 PRM3Q9NNZ6 103 aa7.16□□□□□ -1.26
LSM6P2-201ENST00000552208 PNMA3Q9UL41 463 aa7.16□□□□□ -1.26
LSM6P2-201ENST00000552208 PTPREP23469 700 aa7.15□□□□□ -1.26
LSM6P2-201ENST00000552208 GCGRP47871 477 aa7.15□□□□□ -1.26
LSM6P2-201ENST00000552208 USP46P62068 366 aa7.15□□□□□ -1.26
LSM6P2-201ENST00000552208 SRPK2P78362 688 aaKnown RBP7.15□□□□□ -1.26
LSM6P2-201ENST00000552208 ADAMTS19Q8TE59 1207 aa7.15□□□□□ -1.26
LSM6P2-201ENST00000552208 HOXA2O43364 376 aa7.14□□□□□ -1.27
LSM6P2-201ENST00000552208 PACS2Q86VP3 889 aa7.14□□□□□ -1.27
LSM6P2-201ENST00000552208 AEBP1Q8IUX7 1158 aa7.14□□□□□ -1.27
LSM6P2-201ENST00000552208 TRIM34Q9BYJ4 488 aa7.14□□□□□ -1.27
LSM6P2-201ENST00000552208 PCDHGC3Q9UN70 934 aa7.14□□□□□ -1.27
LSM6P2-201ENST00000552208 ERBB3P21860 1342 aa7.13□□□□□ -1.27
LSM6P2-201ENST00000552208 NUTM2BA6NNL0 878 aaPredicted RBP7.13□□□□□ -1.27
LSM6P2-201ENST00000552208 NUTM2EB1AL46 878 aaPredicted RBP7.13□□□□□ -1.27
LSM6P2-201ENST00000552208 NUTM2DQ5VT03 806 aaPredicted RBP7.13□□□□□ -1.27
LSM6P2-201ENST00000552208 NUTM2AQ8IVF1 878 aaPredicted RBP7.13□□□□□ -1.27
LSM6P2-201ENST00000552208 ZBTB3Q9H5J0 574 aa7.13□□□□□ -1.27
LSM6P2-201ENST00000552208 NDUFB9Q9Y6M9 179 aa7.13□□□□□ -1.27
LSM6P2-201ENST00000552208 ACIN1Q9UKV3 1341 aaKnown RBP7.12□□□□□ -1.27
LSM6P2-201ENST00000552208 HDGFL1Q5TGJ6 251 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms