RNA–Protein interactions for RNA: ENST00000551604.2

CUX2-203, Transcript of cut like homeobox 2, humanhuman

TSL 5

Gene CUX2, Length 562 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-203ENST00000551604 PROX2Q3B8N5 592 aa9.5□□□□□ -0.89
CUX2-203ENST00000551604 REPIN1Q9BWE0 567 aaKnown RBP9.5□□□□□ -0.89
CUX2-203ENST00000551604 NBPF3Q9H094 633 aa9.49□□□□□ -0.89
CUX2-203ENST00000551604 PCDHGA10Q9Y5H3 936 aa9.49□□□□□ -0.89
CUX2-203ENST00000551604 COL9A1P20849 921 aa9.48□□□□□ -0.89
CUX2-203ENST00000551604 DIXDC1Q155Q3 683 aa9.48□□□□□ -0.89
CUX2-203ENST00000551604 BEGAINQ9BUH8 593 aa9.48□□□□□ -0.89
CUX2-203ENST00000551604 PODXL2Q9NZ53 605 aa9.48□□□□□ -0.89
CUX2-203ENST00000551604 RAD21O60216 631 aa9.47□□□□□ -0.89
CUX2-203ENST00000551604 ARID3CA6NKF2 412 aa9.46□□□□□ -0.9
CUX2-203ENST00000551604 PPP1R3GB7ZBB8 358 aa9.46□□□□□ -0.9
CUX2-203ENST00000551604 MCM6Q14566 821 aa9.46□□□□□ -0.9
CUX2-203ENST00000551604 TSR1Q2NL82 804 aaKnown RBP9.46□□□□□ -0.9
CUX2-203ENST00000551604 METTL3Q86U44 580 aaKnown RBP9.46□□□□□ -0.9
CUX2-203ENST00000551604 RBM27Q9P2N5 1060 aaKnown RBP9.46□□□□□ -0.9
CUX2-203ENST00000551604 TRAK2O60296 914 aa9.45□□□□□ -0.9
CUX2-203ENST00000551604 C1orf115Q9H7X2 142 aa9.45□□□□□ -0.9
CUX2-203ENST00000551604 FAM217BQ9NTX9 383 aaPredicted RBP9.45□□□□□ -0.9
CUX2-203ENST00000551604 A0A0G2JS52 829 aa9.44□□□□□ -0.9
CUX2-203ENST00000551604 BCAMP50895 628 aa9.44□□□□□ -0.9
CUX2-203ENST00000551604 CLUAP1Q96AJ1 413 aa9.44□□□□□ -0.9
CUX2-203ENST00000551604 IFFO2Q5TF58 517 aa9.43□□□□□ -0.9
CUX2-203ENST00000551604 PHOX2BQ99453 314 aa9.43□□□□□ -0.9
CUX2-203ENST00000551604 RABGEF1Q9UJ41 708 aa9.43□□□□□ -0.9
CUX2-203ENST00000551604 ANKK1Q8NFD2 765 aa9.42□□□□□ -0.9
CUX2-203ENST00000551604 C6orf132Q5T0Z8 1188 aa9.41□□□□□ -0.9
CUX2-203ENST00000551604 PADI6Q6TGC4 694 aa9.41□□□□□ -0.9
CUX2-203ENST00000551604 RBM46Q8TBY0 533 aaKnown RBP9.41□□□□□ -0.9
CUX2-203ENST00000551604 PXYLP1Q8TE99 480 aa9.41□□□□□ -0.9
CUX2-203ENST00000551604 IRX2Q9BZI1 471 aaPredicted RBP9.41□□□□□ -0.9
CUX2-203ENST00000551604 ADGRG1Q9Y653 693 aa9.41□□□□□ -0.9
CUX2-203ENST00000551604 PROSER2Q86WR7 435 aaPredicted RBP9.4□□□□□ -0.9
CUX2-203ENST00000551604 POLR3EQ9NVU0 708 aa9.4□□□□□ -0.9
CUX2-203ENST00000551604 KIAA1468Q9P260 1216 aa9.4□□□□□ -0.9
CUX2-203ENST00000551604 SPDYE5A6NIY4 337 aa9.39□□□□□ -0.91
CUX2-203ENST00000551604 CLK2P49760 499 aaKnown RBP9.39□□□□□ -0.91
CUX2-203ENST00000551604 SEPT9Q9UHD8 586 aaPredicted RBP9.39□□□□□ -0.91
CUX2-203ENST00000551604 RGS20O76081 388 aa9.38□□□□□ -0.91
CUX2-203ENST00000551604 PDIA4P13667 645 aaKnown RBP9.38□□□□□ -0.91
CUX2-203ENST00000551604 MYSM1Q5VVJ2 828 aa9.38□□□□□ -0.91
CUX2-203ENST00000551604 CCDC82Q8N4S0 544 aa9.38□□□□□ -0.91
CUX2-203ENST00000551604 BANK1Q8NDB2 785 aa9.38□□□□□ -0.91
CUX2-203ENST00000551604 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.38□□□□□ -0.91
CUX2-203ENST00000551604 PROCA1Q8NCQ7 364 aaPredicted RBP9.37□□□□□ -0.91
CUX2-203ENST00000551604 SOWAHBA6NEL2 793 aa9.36□□□□□ -0.91
CUX2-203ENST00000551604 FAM161AQ3B820 660 aa9.36□□□□□ -0.91
CUX2-203ENST00000551604 TMEM259Q4ZIN3 620 aa9.36□□□□□ -0.91
CUX2-203ENST00000551604 TTC13Q8NBP0 860 aa9.36□□□□□ -0.91
CUX2-203ENST00000551604 CCDC97Q96F63 343 aaPredicted RBP9.36□□□□□ -0.91
CUX2-203ENST00000551604 ZFRQ96KR1 1074 aaKnown RBP9.36□□□□□ -0.91
CUX2-203ENST00000551604 SERPINA10Q9UK55 444 aa9.36□□□□□ -0.91
CUX2-203ENST00000551604 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.35□□□□□ -0.91
CUX2-203ENST00000551604 PRSS12P56730 875 aa9.35□□□□□ -0.91
CUX2-203ENST00000551604 WWC1Q8IX03 1113 aa9.35□□□□□ -0.91
CUX2-203ENST00000551604 TBC1D2Q9BYX2 928 aa9.35□□□□□ -0.91
CUX2-203ENST00000551604 WBP1LQ9NX94 342 aa9.35□□□□□ -0.91
CUX2-203ENST00000551604 TRIM26Q12899 539 aaPredicted RBP9.34□□□□□ -0.91
CUX2-203ENST00000551604 LAPTM4BQ86VI4 370 aa9.34□□□□□ -0.91
CUX2-203ENST00000551604 SULF1Q8IWU6 871 aa9.34□□□□□ -0.91
CUX2-203ENST00000551604 PRM3Q9NNZ6 103 aa9.34□□□□□ -0.91
CUX2-203ENST00000551604 CDCA7LQ96GN5 454 aa9.33□□□□□ -0.92
CUX2-203ENST00000551604 ZBTB7CA1YPR0 619 aa9.32□□□□□ -0.92
CUX2-203ENST00000551604 ITGBL1O95965 494 aaPredicted RBP9.32□□□□□ -0.92
CUX2-203ENST00000551604 RFC5P40937 340 aa9.32□□□□□ -0.92
CUX2-203ENST00000551604 NLRP7Q8WX94 980 aa9.32□□□□□ -0.92
CUX2-203ENST00000551604 ZNF777Q9ULD5 760 aaPredicted RBP9.32□□□□□ -0.92
CUX2-203ENST00000551604 TRIM6-TRIM34B2RNG4 842 aa9.31□□□□□ -0.92
CUX2-203ENST00000551604 FNBP4Q8N3X1 1017 aaPredicted RBP9.31□□□□□ -0.92
CUX2-203ENST00000551604 RANGAP1P46060 587 aaPredicted RBP9.3□□□□□ -0.92
CUX2-203ENST00000551604 TUSC1Q2TAM9 212 aa9.3□□□□□ -0.92
CUX2-203ENST00000551604 PPP2R2DQ66LE6 453 aa9.3□□□□□ -0.92
CUX2-203ENST00000551604 NUTM1Q86Y26 1132 aa9.3□□□□□ -0.92
CUX2-203ENST00000551604 RIC3Q7Z5B4 369 aa9.29□□□□□ -0.92
CUX2-203ENST00000551604 POM121Q96HA1 1249 aa9.28□□□□□ -0.92
CUX2-203ENST00000551604 HPS5Q9UPZ3 1129 aa9.28□□□□□ -0.92
CUX2-203ENST00000551604 COG6Q9Y2V7 657 aa9.28□□□□□ -0.92
CUX2-203ENST00000551604 RCCD1A6NED2 376 aa9.27□□□□□ -0.93
CUX2-203ENST00000551604 KCNC4Q03721 635 aa9.27□□□□□ -0.93
CUX2-203ENST00000551604 FAM98CQ17RN3 349 aaKnown RBP9.27□□□□□ -0.93
CUX2-203ENST00000551604 SPIRE2Q8WWL2 714 aa9.27□□□□□ -0.93
CUX2-203ENST00000551604 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.27□□□□□ -0.93
CUX2-203ENST00000551604 ZNF330Q9Y3S2 320 aaPredicted RBP9.27□□□□□ -0.93
CUX2-203ENST00000551604 NBPF26B4DH59 902 aa9.26□□□□□ -0.93
CUX2-203ENST00000551604 SOCS7O14512 581 aa9.26□□□□□ -0.93
CUX2-203ENST00000551604 DNAJB2P25686 324 aa9.26□□□□□ -0.93
CUX2-203ENST00000551604 GJA5P36382 358 aa9.26□□□□□ -0.93
CUX2-203ENST00000551604 LRCH3Q96II8 777 aa9.26□□□□□ -0.93
CUX2-203ENST00000551604 CD46P15529 392 aa9.25□□□□□ -0.93
CUX2-203ENST00000551604 NYAP1Q6ZVC0 841 aa9.25□□□□□ -0.93
CUX2-203ENST00000551604 LIMD1Q9UGP4 676 aa9.25□□□□□ -0.93
CUX2-203ENST00000551604 TSR3Q9UJK0 312 aaKnown RBP9.25□□□□□ -0.93
CUX2-203ENST00000551604 TSKSQ9UJT2 592 aa9.25□□□□□ -0.93
CUX2-203ENST00000551604 SPTLC1O15269 473 aa9.24□□□□□ -0.93
CUX2-203ENST00000551604 HRCP23327 699 aa9.24□□□□□ -0.93
CUX2-203ENST00000551604 RSPH4AQ5TD94 716 aa9.24□□□□□ -0.93
CUX2-203ENST00000551604 EYA1Q99502 592 aa9.24□□□□□ -0.93
CUX2-203ENST00000551604 SNRKQ9NRH2 765 aa9.24□□□□□ -0.93
CUX2-203ENST00000551604 DDX11L8A8MPP1 907 aa9.23□□□□□ -0.93
CUX2-203ENST00000551604 SMAPO00193 183 aa9.23□□□□□ -0.93
CUX2-203ENST00000551604 Q6ZNB5 142 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms