RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 GIGYF2Q6Y7W6 1299 aaKnown RBP4.33□□□□□ -1.72
CPSF6-207ENST00000551516 GPCPD1Q9NPB8 672 aa4.33□□□□□ -1.72
CPSF6-207ENST00000551516 ADAMTS12P58397 1594 aa4.32□□□□□ -1.72
CPSF6-207ENST00000551516 PSDA5PKW4 1024 aaPredicted RBP4.32□□□□□ -1.72
CPSF6-207ENST00000551516 SNPHO15079 494 aa4.32□□□□□ -1.72
CPSF6-207ENST00000551516 HOXB3P14651 431 aaPredicted RBP4.32□□□□□ -1.72
CPSF6-207ENST00000551516 MDM2Q00987 491 aaPredicted RBP4.32□□□□□ -1.72
CPSF6-207ENST00000551516 GPR153Q6NV75 609 aa4.32□□□□□ -1.72
CPSF6-207ENST00000551516 PADI6Q6TGC4 694 aa4.32□□□□□ -1.72
CPSF6-207ENST00000551516 KHSRPQ92945 711 aaKnown RBP eCLIP4.32□□□□□ -1.724e-7■■■□□ 16.4
CPSF6-207ENST00000551516 RBM27Q9P2N5 1060 aaKnown RBP4.32□□□□□ -1.72
CPSF6-207ENST00000551516 WRNQ14191 1432 aaPredicted RBP eCLIP4.31□□□□□ -1.72
CPSF6-207ENST00000551516 PLEKHG3A1L390 1219 aa4.31□□□□□ -1.72
CPSF6-207ENST00000551516 POTEB2H3BUK9 544 aa4.31□□□□□ -1.72
CPSF6-207ENST00000551516 POTEJP0CG39 1038 aa4.31□□□□□ -1.72
CPSF6-207ENST00000551516 SSTR3P32745 418 aaPredicted RBP4.31□□□□□ -1.72
CPSF6-207ENST00000551516 PPP4R3BQ5MIZ7 849 aa4.31□□□□□ -1.72
CPSF6-207ENST00000551516 PCMTD1Q96MG8 357 aaPredicted RBP4.31□□□□□ -1.72
CPSF6-207ENST00000551516 ADAM33Q9BZ11 813 aa4.31□□□□□ -1.72
CPSF6-207ENST00000551516 GOPCQ9HD26 462 aa4.31□□□□□ -1.72
CPSF6-207ENST00000551516 LHX6Q9UPM6 363 aa4.31□□□□□ -1.72
CPSF6-207ENST00000551516 MAPKBP1O60336 1514 aa4.31□□□□□ -1.72
CPSF6-207ENST00000551516 ERICH3Q5RHP9 1530 aa4.31□□□□□ -1.72
CPSF6-207ENST00000551516 PRG4Q92954 1404 aaPredicted RBP4.3□□□□□ -1.72
CPSF6-207ENST00000551516 MS4A1P11836 297 aa4.3□□□□□ -1.72
CPSF6-207ENST00000551516 PRSS12P56730 875 aa4.3□□□□□ -1.72
CPSF6-207ENST00000551516 METTL3Q86U44 580 aaKnown RBP4.3□□□□□ -1.72
CPSF6-207ENST00000551516 RBM46Q8TBY0 533 aaKnown RBP4.3□□□□□ -1.72
CPSF6-207ENST00000551516 CDCA7LQ96GN5 454 aa4.3□□□□□ -1.72
CPSF6-207ENST00000551516 REPIN1Q9BWE0 567 aaKnown RBP4.3□□□□□ -1.72
CPSF6-207ENST00000551516 RSPH6AQ9H0K4 717 aa4.3□□□□□ -1.72
CPSF6-207ENST00000551516 ATP1B4Q9UN42 357 aaPredicted RBP4.3□□□□□ -1.72
CPSF6-207ENST00000551516 TOP2BQ02880 1626 aa4.29□□□□□ -1.72
CPSF6-207ENST00000551516 PTPREP23469 700 aa4.29□□□□□ -1.72
CPSF6-207ENST00000551516 FAM161AQ3B820 660 aa4.29□□□□□ -1.72
CPSF6-207ENST00000551516 LHX8Q68G74 356 aa4.29□□□□□ -1.72
CPSF6-207ENST00000551516 PXYLP1Q8TE99 480 aa4.29□□□□□ -1.72
CPSF6-207ENST00000551516 PHOX2BQ99453 314 aa4.29□□□□□ -1.72
CPSF6-207ENST00000551516 TMUB1Q9BVT8 246 aa4.29□□□□□ -1.72
CPSF6-207ENST00000551516 ADGRG1Q9Y653 693 aa4.29□□□□□ -1.72
CPSF6-207ENST00000551516 KIAA0586Q9BVV6 1533 aa4.28□□□□□ -1.72
CPSF6-207ENST00000551516 HOXB1P14653 301 aaPredicted RBP4.28□□□□□ -1.72
CPSF6-207ENST00000551516 TTC13Q8NBP0 860 aa4.28□□□□□ -1.72
CPSF6-207ENST00000551516 KCNH8Q96L42 1107 aa4.28□□□□□ -1.72
CPSF6-207ENST00000551516 BEGAINQ9BUH8 593 aa4.28□□□□□ -1.72
CPSF6-207ENST00000551516 ZMYND15Q9H091 742 aa4.28□□□□□ -1.72
CPSF6-207ENST00000551516 BCL2L12Q9HB09 334 aa4.28□□□□□ -1.72
CPSF6-207ENST00000551516 FAM217BQ9NTX9 383 aaPredicted RBP4.28□□□□□ -1.72
CPSF6-207ENST00000551516 ADCY10Q96PN6 1610 aa4.28□□□□□ -1.72
CPSF6-207ENST00000551516 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP4.27□□□□□ -1.73
CPSF6-207ENST00000551516 PPP1R3GB7ZBB8 358 aa4.27□□□□□ -1.73
CPSF6-207ENST00000551516 FAM69CQ0P6D2 419 aa4.27□□□□□ -1.73
CPSF6-207ENST00000551516 FLIIQ13045 1269 aa4.27□□□□□ -1.73
CPSF6-207ENST00000551516 SKIV2LQ15477 1246 aaKnown RBP4.27□□□□□ -1.73
CPSF6-207ENST00000551516 DIXDC1Q155Q3 683 aa4.27□□□□□ -1.73
CPSF6-207ENST00000551516 SH3D19Q5HYK7 790 aa4.27□□□□□ -1.73
CPSF6-207ENST00000551516 KIF13AQ9H1H9 1805 aa4.27□□□□□ -1.73
CPSF6-207ENST00000551516 BIVM-ERCC5R4GMW8 1640 aa4.27□□□□□ -1.73
CPSF6-207ENST00000551516 DIP2BQ9P265 1576 aa4.27□□□□□ -1.73
CPSF6-207ENST00000551516 SUPT5HO00267 1087 aaKnown RBP4.26□□□□□ -1.73
CPSF6-207ENST00000551516 PACS2Q86VP3 889 aa4.26□□□□□ -1.73
CPSF6-207ENST00000551516 NLRP7Q8WX94 980 aa4.26□□□□□ -1.73
CPSF6-207ENST00000551516 PNMA3Q9UL41 463 aa4.26□□□□□ -1.73
CPSF6-207ENST00000551516 RUSC2Q8N2Y8 1516 aa4.26□□□□□ -1.73
CPSF6-207ENST00000551516 PBRM1Q86U86 1689 aa4.26□□□□□ -1.73
CPSF6-207ENST00000551516 UHRF1BP1LA0JNW5 1464 aa4.25□□□□□ -1.73
CPSF6-207ENST00000551516 RCCD1A6NED2 376 aa4.25□□□□□ -1.73
CPSF6-207ENST00000551516 NBPF26B4DH59 902 aa4.25□□□□□ -1.73
CPSF6-207ENST00000551516 ONECUT3O60422 494 aaPredicted RBP4.25□□□□□ -1.73
CPSF6-207ENST00000551516 COL9A1P20849 921 aa4.25□□□□□ -1.73
CPSF6-207ENST00000551516 NUDT18Q6ZVK8 323 aa4.25□□□□□ -1.73
CPSF6-207ENST00000551516 SULF1Q8IWU6 871 aa4.25□□□□□ -1.73
CPSF6-207ENST00000551516 ARXQ96QS3 562 aa4.25□□□□□ -1.73
CPSF6-207ENST00000551516 DISP1Q96F81 1524 aa4.25□□□□□ -1.73
CPSF6-207ENST00000551516 TRIM6-TRIM34B2RNG4 842 aa4.24□□□□□ -1.73
CPSF6-207ENST00000551516 DNAJB2P25686 324 aa4.24□□□□□ -1.73
CPSF6-207ENST00000551516 TATDN2Q93075 761 aa4.24□□□□□ -1.73
CPSF6-207ENST00000551516 EYA1Q99502 592 aa4.24□□□□□ -1.73
CPSF6-207ENST00000551516 POLR3EQ9NVU0 708 aa4.24□□□□□ -1.73
CPSF6-207ENST00000551516 TSKSQ9UJT2 592 aa4.24□□□□□ -1.73
CPSF6-207ENST00000551516 PPRC1Q5VV67 1664 aaKnown RBP4.24□□□□□ -1.73
CPSF6-207ENST00000551516 KDM5BQ9UGL1 1544 aa4.24□□□□□ -1.73
CPSF6-207ENST00000551516 GLI2P10070 1586 aa4.23□□□□□ -1.73
CPSF6-207ENST00000551516 ABCC2Q92887 1545 aa4.23□□□□□ -1.73
CPSF6-207ENST00000551516 CLK2P49760 499 aaKnown RBP4.23□□□□□ -1.73
CPSF6-207ENST00000551516 NUTM1Q86Y26 1132 aa4.23□□□□□ -1.73
CPSF6-207ENST00000551516 KCNK17Q96T54 332 aa4.23□□□□□ -1.73
CPSF6-207ENST00000551516 FAM198AQ9UFP1 575 aa4.23□□□□□ -1.73
CPSF6-207ENST00000551516 PTPRGP23470 1445 aa4.22□□□□□ -1.73
CPSF6-207ENST00000551516 ASXL2Q76L83 1435 aa4.22□□□□□ -1.73
CPSF6-207ENST00000551516 DDX11L8A8MPP1 907 aa4.22□□□□□ -1.73
CPSF6-207ENST00000551516 CD46P15529 392 aa4.22□□□□□ -1.73
CPSF6-207ENST00000551516 HDGFP51858 240 aaKnown RBP4.22□□□□□ -1.73
CPSF6-207ENST00000551516 RSPH4AQ5TD94 716 aa4.22□□□□□ -1.73
CPSF6-207ENST00000551516 MYSM1Q5VVJ2 828 aa4.22□□□□□ -1.73
CPSF6-207ENST00000551516 TBC1D2Q9BYX2 928 aa4.22□□□□□ -1.73
CPSF6-207ENST00000551516 ERBB3P21860 1342 aa4.21□□□□□ -1.73
CPSF6-207ENST00000551516 EPRSP07814 1512 aaKnown RBP4.21□□□□□ -1.73
CPSF6-207ENST00000551516 UBTFP17480 764 aaKnown RBP4.21□□□□□ -1.74
CPSF6-207ENST00000551516 PROX2Q3B8N5 592 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms