RNA–Protein interactions for RNA: ENST00000551355.5

NEK3-203, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-203ENST00000551355 THEMISQ8N1K5 641 aaPredicted RBP14.77□□□□□ -0.05
NEK3-203ENST00000551355 CFAP65Q6ZU64 1925 aaKnown RBP14.76□□□□□ -0.05
NEK3-203ENST00000551355 NBPF8Q3BBV2 869 aa14.76□□□□□ -0.05
NEK3-203ENST00000551355 NRXN1Q9ULB1 1477 aa14.75□□□□□ -0.05
NEK3-203ENST00000551355 TMEM2Q9UHN6 1383 aa14.73□□□□□ -0.05
NEK3-203ENST00000551355 RALGAPBQ86X10 1494 aa14.73□□□□□ -0.05
NEK3-203ENST00000551355 RIMS2Q9UQ26 1411 aa14.73□□□□□ -0.05
NEK3-203ENST00000551355 NEXMIFQ5QGS0 1516 aa14.72□□□□□ -0.05
NEK3-203ENST00000551355 KDM4FA0A1W2PPD8 638 aa14.72□□□□□ -0.05
NEK3-203ENST00000551355 EID1Q9Y6B2 187 aa14.72□□□□□ -0.05
NEK3-203ENST00000551355 ROCK2O75116 1388 aaKnown RBP14.72□□□□□ -0.05
NEK3-203ENST00000551355 ADGRF5Q8IZF2 1346 aa14.71□□□□□ -0.05
NEK3-203ENST00000551355 GPRASP1Q5JY77 1395 aa14.71□□□□□ -0.06
NEK3-203ENST00000551355 MYO3AQ8NEV4 1616 aa14.7□□□□□ -0.06
NEK3-203ENST00000551355 PIK3C2GO75747 1445 aa14.7□□□□□ -0.06
NEK3-203ENST00000551355 EIF4G2P78344 907 aaKnown RBP eCLIP14.7□□□□□ -0.06
NEK3-203ENST00000551355 C14orf93Q9H972 538 aaKnown RBP14.7□□□□□ -0.06
NEK3-203ENST00000551355 SETD1BQ9UPS6 1966 aaKnown RBP14.69□□□□□ -0.06
NEK3-203ENST00000551355 CEP170BQ9Y4F5 1589 aaPredicted RBP14.69□□□□□ -0.06
NEK3-203ENST00000551355 CARD11Q9BXL7 1154 aa14.69□□□□□ -0.06
NEK3-203ENST00000551355 SLIT1O75093 1534 aa14.69□□□□□ -0.06
NEK3-203ENST00000551355 UBR1Q8IWV7 1749 aa14.69□□□□□ -0.06
NEK3-203ENST00000551355 IFT172Q9UG01 1749 aa14.69□□□□□ -0.06
NEK3-203ENST00000551355 PPLO60437 1756 aa14.68□□□□□ -0.06
NEK3-203ENST00000551355 ARHGAP23Q9P227 1491 aa14.68□□□□□ -0.06
NEK3-203ENST00000551355 TXNDC2Q86VQ3 553 aa14.67□□□□□ -0.06
NEK3-203ENST00000551355 ZNF316A6NFI3 1004 aaPredicted RBP14.66□□□□□ -0.06
NEK3-203ENST00000551355 KIAA1210Q9ULL0 1709 aa14.66□□□□□ -0.06
NEK3-203ENST00000551355 ZNF142P52746 1687 aaPredicted RBP14.65□□□□□ -0.06
NEK3-203ENST00000551355 PLEKHG1Q9ULL1 1385 aa14.65□□□□□ -0.06
NEK3-203ENST00000551355 CFAP70Q5T0N1 1121 aa14.65□□□□□ -0.06
NEK3-203ENST00000551355 ANKLE2Q86XL3 938 aa14.65□□□□□ -0.06
NEK3-203ENST00000551355 TRPM1Q7Z4N2 1603 aa14.65□□□□□ -0.06
NEK3-203ENST00000551355 SLC24A1O60721 1099 aa14.64□□□□□ -0.07
NEK3-203ENST00000551355 NBPF1Q3BBV0 1214 aa14.64□□□□□ -0.07
NEK3-203ENST00000551355 NUTM2DQ5VT03 806 aaPredicted RBP14.64□□□□□ -0.07
NEK3-203ENST00000551355 SETBP1Q9Y6X0 1596 aa14.64□□□□□ -0.07
NEK3-203ENST00000551355 LAMC1P11047 1609 aa14.63□□□□□ -0.07
NEK3-203ENST00000551355 USP47Q96K76 1375 aa14.63□□□□□ -0.07
NEK3-203ENST00000551355 SCAF11Q99590 1463 aaKnown RBP14.63□□□□□ -0.07
NEK3-203ENST00000551355 EIF3AQ14152 1382 aaKnown RBP14.62□□□□□ -0.07
NEK3-203ENST00000551355 LTKP29376 864 aa14.62□□□□□ -0.07
NEK3-203ENST00000551355 HSPA5P11021 654 aaKnown RBP14.61□□□□□ -0.07
NEK3-203ENST00000551355 BCANQ96GW7 911 aa14.61□□□□□ -0.07
NEK3-203ENST00000551355 MYO5BQ9ULV0 1848 aa14.61□□□□□ -0.07
NEK3-203ENST00000551355 TBX22Q9Y458 520 aa14.59□□□□□ -0.07
NEK3-203ENST00000551355 ALKQ9UM73 1620 aa14.58□□□□□ -0.08
NEK3-203ENST00000551355 ADGRB1O14514 1584 aa14.57□□□□□ -0.08
NEK3-203ENST00000551355 DIP2AQ14689 1571 aa14.56□□□□□ -0.08
NEK3-203ENST00000551355 ST20-MTHFSA0A0A6YYL1 179 aa14.55□□□□□ -0.08
NEK3-203ENST00000551355 TMEM132EQ6IEE7 984 aa14.55□□□□□ -0.08
NEK3-203ENST00000551355 SIRT1Q96EB6 747 aa14.55□□□□□ -0.08
NEK3-203ENST00000551355 LRPPRCP42704 1394 aaKnown RBP14.55□□□□□ -0.08
NEK3-203ENST00000551355 PIK3R4Q99570 1358 aa14.55□□□□□ -0.08
NEK3-203ENST00000551355 ADAMTS13Q76LX8 1427 aa14.55□□□□□ -0.08
NEK3-203ENST00000551355 MED14O60244 1454 aa14.55□□□□□ -0.08
NEK3-203ENST00000551355 ABCC11Q96J66 1382 aa14.54□□□□□ -0.08
NEK3-203ENST00000551355 YTHDC2Q9H6S0 1430 aaKnown RBP14.54□□□□□ -0.08
NEK3-203ENST00000551355 LMTK3Q96Q04 1460 aa14.52□□□□□ -0.08
NEK3-203ENST00000551355 NPHP4O75161 1426 aaPredicted RBP14.52□□□□□ -0.08
NEK3-203ENST00000551355 SBNO2Q9Y2G9 1366 aa14.52□□□□□ -0.08
NEK3-203ENST00000551355 CENPJQ9HC77 1338 aaPredicted RBP14.52□□□□□ -0.08
NEK3-203ENST00000551355 CDCA8Q53HL2 280 aa14.52□□□□□ -0.09
NEK3-203ENST00000551355 TRAK1Q9UPV9 953 aa14.52□□□□□ -0.09
NEK3-203ENST00000551355 NRXN3Q9Y4C0 1643 aa14.52□□□□□ -0.09
NEK3-203ENST00000551355 METP08581 1390 aa14.51□□□□□ -0.09
NEK3-203ENST00000551355 TMF1P82094 1093 aa14.51□□□□□ -0.09
NEK3-203ENST00000551355 SLC26A8Q96RN1 970 aa14.51□□□□□ -0.09
NEK3-203ENST00000551355 IQGAP1P46940 1657 aa14.51□□□□□ -0.09
NEK3-203ENST00000551355 TECPR2O15040 1411 aa14.5□□□□□ -0.09
NEK3-203ENST00000551355 TESK2Q96S53 571 aa14.5□□□□□ -0.09
NEK3-203ENST00000551355 HIRIP3Q9BW71 556 aaPredicted RBP14.5□□□□□ -0.09
NEK3-203ENST00000551355 STK26Q9P289 416 aa14.5□□□□□ -0.09
NEK3-203ENST00000551355 DLC1Q96QB1 1528 aa14.5□□□□□ -0.09
NEK3-203ENST00000551355 NCKAP5LQ9HCH0 1330 aa14.49□□□□□ -0.09
NEK3-203ENST00000551355 ASXL1Q8IXJ9 1541 aa14.49□□□□□ -0.09
NEK3-203ENST00000551355 FAM135BQ49AJ0 1406 aa14.49□□□□□ -0.09
NEK3-203ENST00000551355 POGKQ9P215 609 aa14.48□□□□□ -0.09
NEK3-203ENST00000551355 DMRT2Q9Y5R5 561 aa14.47□□□□□ -0.09
NEK3-203ENST00000551355 SETD1AO15047 1707 aaKnown RBP14.46□□□□□ -0.09
NEK3-203ENST00000551355 HSPA2P54652 639 aa14.46□□□□□ -0.09
NEK3-203ENST00000551355 PUS7Q96PZ0 661 aaKnown RBP14.46□□□□□ -0.09
NEK3-203ENST00000551355 PRAM1Q96QH2 718 aa14.46□□□□□ -0.09
NEK3-203ENST00000551355 AMOTL2Q9Y2J4 779 aa14.46□□□□□ -0.09
NEK3-203ENST00000551355 CCDC7Q96M83 1385 aa14.46□□□□□ -0.1
NEK3-203ENST00000551355 WASHC2AQ641Q2 1341 aa14.44□□□□□ -0.1
NEK3-203ENST00000551355 POLR1AO95602 1720 aaPredicted RBP14.44□□□□□ -0.1
NEK3-203ENST00000551355 PTCH1Q13635 1447 aa14.44□□□□□ -0.1
NEK3-203ENST00000551355 KIF7Q2M1P5 1343 aa14.43□□□□□ -0.1
NEK3-203ENST00000551355 EVC2Q86UK5 1308 aa14.43□□□□□ -0.1
NEK3-203ENST00000551355 CPS1P31327 1500 aa14.43□□□□□ -0.1
NEK3-203ENST00000551355 KCNA6P17658 529 aa14.43□□□□□ -0.1
NEK3-203ENST00000551355 C11orf95C9JLR9 678 aaPredicted RBP14.42□□□□□ -0.1
NEK3-203ENST00000551355 PTPRUQ92729 1446 aa14.41□□□□□ -0.1
NEK3-203ENST00000551355 KNDC1Q76NI1 1749 aa14.41□□□□□ -0.1
NEK3-203ENST00000551355 ARHGEF28Q8N1W1 1705 aaKnown RBP14.41□□□□□ -0.1
NEK3-203ENST00000551355 ROBO2Q9HCK4 1378 aa14.4□□□□□ -0.1
NEK3-203ENST00000551355 DISP3Q9P2K9 1392 aa14.39□□□□□ -0.11
NEK3-203ENST00000551355 DIEXFQ68CQ4 756 aaKnown RBP14.39□□□□□ -0.11
NEK3-203ENST00000551355 WAPLQ7Z5K2 1190 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 112 ms