RNA–Protein interactions for RNA: ENST00000550471.1

GCN1-207, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-207ENST00000550471 BCANQ96GW7 911 aa30.11■■■□□ 2.41
GCN1-207ENST00000550471 PIP4K2BP78356 416 aa30.1■■■□□ 2.41
GCN1-207ENST00000550471 NAIPQ13075 1403 aa30.09■■■□□ 2.41
GCN1-207ENST00000550471 CHGAP10645 457 aaKnown RBP30.08■■■□□ 2.41
GCN1-207ENST00000550471 DISP3Q9P2K9 1392 aa30.07■■■□□ 2.4
GCN1-207ENST00000550471 SLC26A8Q96RN1 970 aa30.07■■■□□ 2.4
GCN1-207ENST00000550471 HFM1A2PYH4 1435 aa30.06■■■□□ 2.4
GCN1-207ENST00000550471 NKTRP30414 1462 aaKnown RBP30.05■■■□□ 2.4
GCN1-207ENST00000550471 TBX22Q9Y458 520 aa30.04■■■□□ 2.4
GCN1-207ENST00000550471 ACIN1Q9UKV3 1341 aaKnown RBP30■■■□□ 2.39
GCN1-207ENST00000550471 HSPA1LP34931 641 aa30■■■□□ 2.39
GCN1-207ENST00000550471 PROSER2Q86WR7 435 aaPredicted RBP30■■■□□ 2.39
GCN1-207ENST00000550471 PIK3R4Q99570 1358 aa30■■■□□ 2.39
GCN1-207ENST00000550471 NWD1Q149M9 1564 aa29.99■■■□□ 2.39
GCN1-207ENST00000550471 MYO5BQ9ULV0 1848 aa29.99■■■□□ 2.39
GCN1-207ENST00000550471 TMEM94Q12767 1356 aa29.98■■■□□ 2.39
GCN1-207ENST00000550471 DIP2AQ14689 1571 aa29.98■■■□□ 2.39
GCN1-207ENST00000550471 SPHKAPQ2M3C7 1700 aa29.97■■■□□ 2.39
GCN1-207ENST00000550471 ALKQ9UM73 1620 aa29.96■■■□□ 2.39
GCN1-207ENST00000550471 NCOA3Q9Y6Q9 1424 aa29.95■■■□□ 2.38
GCN1-207ENST00000550471 TRIM52Q96A61 297 aa29.94■■■□□ 2.38
GCN1-207ENST00000550471 TRPM2O94759 1503 aa29.91■■■□□ 2.38
GCN1-207ENST00000550471 MSH6P52701 1360 aa29.9■■■□□ 2.38
GCN1-207ENST00000550471 FAM135BQ49AJ0 1406 aa29.9■■■□□ 2.38
GCN1-207ENST00000550471 ZNF326Q5BKZ1 582 aaKnown RBP29.89■■■□□ 2.38
GCN1-207ENST00000550471 XIRP1Q702N8 1843 aaKnown RBP29.89■■■□□ 2.38
GCN1-207ENST00000550471 ADAMTS13Q76LX8 1427 aa29.88■■■□□ 2.37
GCN1-207ENST00000550471 CHD2O14647 1828 aaKnown RBP29.88■■■□□ 2.37
GCN1-207ENST00000550471 SLC4A1APQ9BWU0 796 aaKnown RBP29.87■■■□□ 2.37
GCN1-207ENST00000550471 NUTM2DQ5VT03 806 aaPredicted RBP29.82■■■□□ 2.36
GCN1-207ENST00000550471 RPGRIP1LQ68CZ1 1315 aa29.8■■■□□ 2.36
GCN1-207ENST00000550471 SETBP1Q9Y6X0 1596 aa29.8■■■□□ 2.36
GCN1-207ENST00000550471 CLTCL1P53675 1640 aa29.78■■■□□ 2.36
GCN1-207ENST00000550471 KIF1BO60333 1816 aa29.78■■■□□ 2.36
GCN1-207ENST00000550471 VGFO15240 615 aaPredicted RBP29.77■■■□□ 2.36
GCN1-207ENST00000550471 C14orf37Q86TY3 774 aa29.75■■■□□ 2.35
GCN1-207ENST00000550471 CADPS2Q86UW7 1296 aa29.75■■■□□ 2.35
GCN1-207ENST00000550471 SENP3Q9H4L4 574 aaPredicted RBP29.75■■■□□ 2.35
GCN1-207ENST00000550471 C19orf44Q9H6X5 657 aa29.75■■■□□ 2.35
GCN1-207ENST00000550471 SLAIN2Q9P270 581 aa29.75■■■□□ 2.35
GCN1-207ENST00000550471 AMOTL2Q9Y2J4 779 aa29.75■■■□□ 2.35
GCN1-207ENST00000550471 MED1Q15648 1581 aaPredicted RBP29.73■■■□□ 2.35
GCN1-207ENST00000550471 NEXMIFQ5QGS0 1516 aa29.72■■■□□ 2.35
GCN1-207ENST00000550471 RBM33Q96EV2 1170 aaKnown RBP29.72■■■□□ 2.35
GCN1-207ENST00000550471 ILDR2Q71H61 639 aa29.7■■■□□ 2.35
GCN1-207ENST00000550471 ATF3P18847 181 aa29.69■■■□□ 2.34
GCN1-207ENST00000550471 NRXN3Q9Y4C0 1643 aa29.67■■■□□ 2.34
GCN1-207ENST00000550471 SOCS7O14512 581 aa29.67■■■□□ 2.34
GCN1-207ENST00000550471 MPHOSPH9Q99550 1183 aa29.67■■■□□ 2.34
GCN1-207ENST00000550471 DCCP43146 1447 aa29.67■■■□□ 2.34
GCN1-207ENST00000550471 ROBO1Q9Y6N7 1651 aa29.66■■■□□ 2.34
GCN1-207ENST00000550471 CCDC144AA2RUR9 1427 aa29.66■■■□□ 2.34
GCN1-207ENST00000550471 PHF23Q9BUL5 403 aaPredicted RBP29.66■■■□□ 2.34
GCN1-207ENST00000550471 PTPRUQ92729 1446 aa29.65■■■□□ 2.34
GCN1-207ENST00000550471 SETD5Q9C0A6 1442 aa29.64■■■□□ 2.34
GCN1-207ENST00000550471 XRN1Q8IZH2 1706 aaKnown RBP29.62■■■□□ 2.33
GCN1-207ENST00000550471 METP08581 1390 aa29.61■■■□□ 2.33
GCN1-207ENST00000550471 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.57■■■□□ 2.32
GCN1-207ENST00000550471 ANKRD30BQ9BXX2 1392 aa29.56■■■□□ 2.32
GCN1-207ENST00000550471 PTCH1Q13635 1447 aa29.54■■■□□ 2.32
GCN1-207ENST00000550471 PRAG1Q86YV5 1406 aa29.54■■■□□ 2.32
GCN1-207ENST00000550471 JCADQ9P266 1359 aa29.53■■■□□ 2.32
GCN1-207ENST00000550471 FOXD1Q16676 465 aa29.53■■■□□ 2.32
GCN1-207ENST00000550471 PPLO60437 1756 aa29.52■■■□□ 2.32
GCN1-207ENST00000550471 ADGRL3Q9HAR2 1447 aa29.51■■■□□ 2.31
GCN1-207ENST00000550471 SPATA31E1Q6ZUB1 1445 aa29.5■■■□□ 2.31
GCN1-207ENST00000550471 PHLPP1O60346 1717 aa29.5■■■□□ 2.31
GCN1-207ENST00000550471 HRCP23327 699 aa29.49■■■□□ 2.31
GCN1-207ENST00000550471 AHDC1Q5TGY3 1603 aaPredicted RBP29.47■■■□□ 2.31
GCN1-207ENST00000550471 RAB3GAP2Q9H2M9 1393 aa29.46■■■□□ 2.31
GCN1-207ENST00000550471 RGL3Q3MIN7 710 aa29.44■■■□□ 2.3
GCN1-207ENST00000550471 BRINP3Q76B58 766 aa29.44■■■□□ 2.3
GCN1-207ENST00000550471 SPATA31A6Q5VVP1 1343 aa29.44■■■□□ 2.3
GCN1-207ENST00000550471 SETD1AO15047 1707 aaKnown RBP29.43■■■□□ 2.3
GCN1-207ENST00000550471 MST1RQ04912 1400 aa29.43■■■□□ 2.3
GCN1-207ENST00000550471 COL16A1Q07092 1604 aaPredicted RBP29.42■■■□□ 2.3
GCN1-207ENST00000550471 ADGRF5Q8IZF2 1346 aa29.39■■■□□ 2.3
GCN1-207ENST00000550471 ROBO2Q9HCK4 1378 aa29.38■■■□□ 2.29
GCN1-207ENST00000550471 ASXL1Q8IXJ9 1541 aa29.37■■■□□ 2.29
GCN1-207ENST00000550471 IFT172Q9UG01 1749 aa29.35■■■□□ 2.29
GCN1-207ENST00000550471 PIK3C2GO75747 1445 aa29.35■■■□□ 2.29
GCN1-207ENST00000550471 STAC3Q96MF2 364 aa29.34■■■□□ 2.29
GCN1-207ENST00000550471 TECPR2O15040 1411 aa29.34■■■□□ 2.29
GCN1-207ENST00000550471 LRRC59Q96AG4 307 aaKnown RBP29.33■■■□□ 2.29
GCN1-207ENST00000550471 LRPPRCP42704 1394 aaKnown RBP29.33■■■□□ 2.29
GCN1-207ENST00000550471 ABCC11Q96J66 1382 aa29.33■■■□□ 2.29
GCN1-207ENST00000550471 NALCNQ8IZF0 1738 aa29.33■■■□□ 2.29
GCN1-207ENST00000550471 MYOM2P54296 1465 aa29.31■■■□□ 2.28
GCN1-207ENST00000550471 RGS17Q9UGC6 210 aaPredicted RBP29.31■■■□□ 2.28
GCN1-207ENST00000550471 C1orf167Q5SNV9 1468 aa29.3■■■□□ 2.28
GCN1-207ENST00000550471 SIRT1Q96EB6 747 aa29.3■■■□□ 2.28
GCN1-207ENST00000550471 SHPRHQ149N8 1683 aa29.3■■■□□ 2.28
GCN1-207ENST00000550471 C14orf93Q9H972 538 aaKnown RBP29.28■■■□□ 2.28
GCN1-207ENST00000550471 NHSL1Q5SYE7 1610 aa29.27■■■□□ 2.28
GCN1-207ENST00000550471 NRXN1Q9ULB1 1477 aa29.27■■■□□ 2.28
GCN1-207ENST00000550471 LAMC1P11047 1609 aa29.25■■■□□ 2.27
GCN1-207ENST00000550471 MEX3CQ5U5Q3 659 aaKnown RBP29.25■■■□□ 2.27
GCN1-207ENST00000550471 CDC42BPGQ6DT37 1551 aa29.24■■■□□ 2.27
GCN1-207ENST00000550471 DHX57Q6P158 1386 aaKnown RBP29.24■■■□□ 2.27
GCN1-207ENST00000550471 KNDC1Q76NI1 1749 aa29.23■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms