RNA–Protein interactions for RNA: ENST00000550309.1

AL355112.1-201, humanhuman

TSL 1 (best) BASIC

Gene AL355112.1, Length 1,236 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL355112.1-201ENST00000550309 SLC4A3P48751 1232 aa11.42□□□□□ -0.58
AL355112.1-201ENST00000550309 PDZRN3Q9UPQ7 1066 aa11.42□□□□□ -0.58
AL355112.1-201ENST00000550309 ZPR1O75312 459 aa11.41□□□□□ -0.58
AL355112.1-201ENST00000550309 GTF3C3Q9Y5Q9 886 aa11.41□□□□□ -0.58
AL355112.1-201ENST00000550309 TMUB1Q9BVT8 246 aa11.4□□□□□ -0.58
AL355112.1-201ENST00000550309 MLLT3P42568 568 aaPredicted RBP11.39□□□□□ -0.59
AL355112.1-201ENST00000550309 PCDHB3Q9Y5E6 796 aa11.39□□□□□ -0.59
AL355112.1-201ENST00000550309 PRR14Q9BWN1 585 aa11.38□□□□□ -0.59
AL355112.1-201ENST00000550309 DNAJB2P25686 324 aa11.35□□□□□ -0.59
AL355112.1-201ENST00000550309 BLOC1S3Q6QNY0 202 aa11.35□□□□□ -0.59
AL355112.1-201ENST00000550309 ARHGEF1Q92888 912 aaKnown RBP11.35□□□□□ -0.59
AL355112.1-201ENST00000550309 PTGDRQ13258 359 aa11.34□□□□□ -0.59
AL355112.1-201ENST00000550309 RNF223E7ERA6 249 aa11.33□□□□□ -0.6
AL355112.1-201ENST00000550309 TLL1O43897 1013 aa11.31□□□□□ -0.6
AL355112.1-201ENST00000550309 ZNF787Q6DD87 383 aa11.31□□□□□ -0.6
AL355112.1-201ENST00000550309 ERICH6Q7L0X2 663 aa11.31□□□□□ -0.6
AL355112.1-201ENST00000550309 RBM46Q8TBY0 533 aaKnown RBP11.31□□□□□ -0.6
AL355112.1-201ENST00000550309 KCNV2Q8TDN2 545 aa11.31□□□□□ -0.6
AL355112.1-201ENST00000550309 TMEM134Q9H6X4 195 aa11.31□□□□□ -0.6
AL355112.1-201ENST00000550309 ADGRG1Q9Y653 693 aa11.31□□□□□ -0.6
AL355112.1-201ENST00000550309 SLC19A1P41440 591 aa11.3□□□□□ -0.6
AL355112.1-201ENST00000550309 EMID1Q96A84 441 aaPredicted RBP11.3□□□□□ -0.6
AL355112.1-201ENST00000550309 TRIM67Q6ZTA4 783 aa11.29□□□□□ -0.6
AL355112.1-201ENST00000550309 RCCD1A6NED2 376 aa11.27□□□□□ -0.61
AL355112.1-201ENST00000550309 ACTN4O43707 911 aaKnown RBP11.27□□□□□ -0.61
AL355112.1-201ENST00000550309 FAM161AQ3B820 660 aa11.27□□□□□ -0.61
AL355112.1-201ENST00000550309 KMT5BQ4FZB7 885 aa11.27□□□□□ -0.61
AL355112.1-201ENST00000550309 NUTM2FA1L443 756 aa11.26□□□□□ -0.61
AL355112.1-201ENST00000550309 PPEF1O14829 653 aaPredicted RBP11.25□□□□□ -0.61
AL355112.1-201ENST00000550309 CFHP08603 1231 aa11.25□□□□□ -0.61
AL355112.1-201ENST00000550309 SPRYD7Q5W111 196 aa11.25□□□□□ -0.61
AL355112.1-201ENST00000550309 ANKLE1Q8NAG6 615 aa11.25□□□□□ -0.61
AL355112.1-201ENST00000550309 S1PR4O95977 384 aa11.24□□□□□ -0.61
AL355112.1-201ENST00000550309 TMEM132AQ24JP5 1023 aa11.23□□□□□ -0.61
AL355112.1-201ENST00000550309 ZNF598Q86UK7 904 aaKnown RBP11.23□□□□□ -0.61
AL355112.1-201ENST00000550309 ARXQ96QS3 562 aa11.23□□□□□ -0.61
AL355112.1-201ENST00000550309 SLC10A3P09131 477 aa11.22□□□□□ -0.61
AL355112.1-201ENST00000550309 PKDCCQ504Y2 493 aa11.21□□□□□ -0.61
AL355112.1-201ENST00000550309 LIAT1Q6ZQX7 453 aa11.21□□□□□ -0.61
AL355112.1-201ENST00000550309 ADH1BP00325 375 aa11.2□□□□□ -0.62
AL355112.1-201ENST00000550309 PRR20EP86478 221 aa11.2□□□□□ -0.62
AL355112.1-201ENST00000550309 PRR20CP86479 221 aa11.2□□□□□ -0.62
AL355112.1-201ENST00000550309 PRR20DP86480 221 aa11.2□□□□□ -0.62
AL355112.1-201ENST00000550309 PRR20BP86481 221 aa11.2□□□□□ -0.62
AL355112.1-201ENST00000550309 PRR20AP86496 221 aa11.2□□□□□ -0.62
AL355112.1-201ENST00000550309 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.19□□□□□ -0.62
AL355112.1-201ENST00000550309 FCHSD2O94868 740 aa11.19□□□□□ -0.62
AL355112.1-201ENST00000550309 MYT1Q01538 1121 aa11.19□□□□□ -0.62
AL355112.1-201ENST00000550309 ZNF775Q96BV0 537 aaPredicted RBP11.19□□□□□ -0.62
AL355112.1-201ENST00000550309 NR1I2O75469 434 aa11.18□□□□□ -0.62
AL355112.1-201ENST00000550309 DGAT1O75907 488 aa11.18□□□□□ -0.62
AL355112.1-201ENST00000550309 ZNF697Q5TEC3 545 aa11.18□□□□□ -0.62
AL355112.1-201ENST00000550309 SLC6A16Q9GZN6 736 aa11.16□□□□□ -0.62
AL355112.1-201ENST00000550309 PXYLP1Q8TE99 480 aa11.15□□□□□ -0.62
AL355112.1-201ENST00000550309 TNFRSF10AO00220 468 aa11.14□□□□□ -0.63
AL355112.1-201ENST00000550309 GDF9O60383 454 aa11.14□□□□□ -0.63
AL355112.1-201ENST00000550309 PLA2G2CQ5R387 149 aa11.14□□□□□ -0.63
AL355112.1-201ENST00000550309 SEMA3EO15041 775 aa11.13□□□□□ -0.63
AL355112.1-201ENST00000550309 OATP04181 439 aa11.13□□□□□ -0.63
AL355112.1-201ENST00000550309 SCUBE3Q8IX30 993 aa11.13□□□□□ -0.63
AL355112.1-201ENST00000550309 FAM187AA6NFU0 413 aa11.12□□□□□ -0.63
AL355112.1-201ENST00000550309 PUS10Q3MIT2 529 aaKnown RBP11.12□□□□□ -0.63
AL355112.1-201ENST00000550309 P3H3Q8IVL6 736 aa11.12□□□□□ -0.63
AL355112.1-201ENST00000550309 POTECB2RU33 542 aa11.11□□□□□ -0.63
AL355112.1-201ENST00000550309 C14orf37Q86TY3 774 aa11.11□□□□□ -0.63
AL355112.1-201ENST00000550309 DAXXQ9UER7 740 aaPredicted RBP11.1□□□□□ -0.63
AL355112.1-201ENST00000550309 RSPH4AQ5TD94 716 aa11.09□□□□□ -0.63
AL355112.1-201ENST00000550309 METTL3Q86U44 580 aaKnown RBP11.09□□□□□ -0.63
AL355112.1-201ENST00000550309 HIC1Q14526 733 aa11.08□□□□□ -0.64
AL355112.1-201ENST00000550309 SPSB2Q99619 263 aa11.08□□□□□ -0.64
AL355112.1-201ENST00000550309 PKD2L1Q9P0L9 805 aa11.05□□□□□ -0.64
AL355112.1-201ENST00000550309 ST8SIA5O15466 376 aa11.04□□□□□ -0.64
AL355112.1-201ENST00000550309 FOXC1Q12948 553 aa11.04□□□□□ -0.64
AL355112.1-201ENST00000550309 RBM26Q5T8P6 1007 aaKnown RBP11.04□□□□□ -0.64
AL355112.1-201ENST00000550309 AAASQ9NRG9 546 aa11.03□□□□□ -0.64
AL355112.1-201ENST00000550309 FECHP22830 423 aa11.02□□□□□ -0.65
AL355112.1-201ENST00000550309 LMOD2Q6P5Q4 547 aa11.02□□□□□ -0.65
AL355112.1-201ENST00000550309 HOMEZQ8IX15 550 aa11.02□□□□□ -0.65
AL355112.1-201ENST00000550309 RDH13Q8NBN7 331 aa11.02□□□□□ -0.65
AL355112.1-201ENST00000550309 MORN1Q5T089 497 aa11.01□□□□□ -0.65
AL355112.1-201ENST00000550309 TESPA1A2RU30 521 aaPredicted RBP11□□□□□ -0.65
AL355112.1-201ENST00000550309 GNPATO15228 680 aa11□□□□□ -0.65
AL355112.1-201ENST00000550309 RPIAP49247 311 aa11□□□□□ -0.65
AL355112.1-201ENST00000550309 FUT2Q10981 343 aa11□□□□□ -0.65
AL355112.1-201ENST00000550309 THAP11Q96EK4 314 aa11□□□□□ -0.65
AL355112.1-201ENST00000550309 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.99□□□□□ -0.65
AL355112.1-201ENST00000550309 FCF1Q9Y324 198 aaKnown RBP10.99□□□□□ -0.65
AL355112.1-201ENST00000550309 DDX11L8A8MPP1 907 aa10.98□□□□□ -0.65
AL355112.1-201ENST00000550309 NLRP7Q8WX94 980 aa10.98□□□□□ -0.65
AL355112.1-201ENST00000550309 ATP6V1AP38606 617 aa10.97□□□□□ -0.65
AL355112.1-201ENST00000550309 FAM160A2Q8N612 972 aaPredicted RBP10.97□□□□□ -0.65
AL355112.1-201ENST00000550309 GPR37O15354 613 aa10.96□□□□□ -0.65
AL355112.1-201ENST00000550309 CD2BP2O95400 341 aaKnown RBP10.96□□□□□ -0.65
AL355112.1-201ENST00000550309 FMNL1O95466 1100 aaPredicted RBP10.96□□□□□ -0.65
AL355112.1-201ENST00000550309 SMYD5Q6GMV2 418 aa10.96□□□□□ -0.65
AL355112.1-201ENST00000550309 SLC27A5Q9Y2P5 690 aa10.96□□□□□ -0.65
AL355112.1-201ENST00000550309 GCGRP47871 477 aa10.95□□□□□ -0.66
AL355112.1-201ENST00000550309 TOR4AQ9NXH8 423 aa10.95□□□□□ -0.66
AL355112.1-201ENST00000550309 CRIPAKQ8N1N5 446 aa10.94□□□□□ -0.66
AL355112.1-201ENST00000550309 PRDM9Q9NQV7 894 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 108.5 ms