RNA–Protein interactions for RNA: ENST00000550069.1

PFDN5-209, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-209ENST00000550069 PRKCSHP14314 528 aaPredicted RBP10.24□□□□□ -0.77
PFDN5-209ENST00000550069 RBM46Q8TBY0 533 aaKnown RBP10.24□□□□□ -0.77
PFDN5-209ENST00000550069 TPRNQ4KMQ1 711 aa10.23□□□□□ -0.77
PFDN5-209ENST00000550069 KRI1Q8N9T8 703 aaKnown RBP10.23□□□□□ -0.77
PFDN5-209ENST00000550069 ANKK1Q8NFD2 765 aa10.23□□□□□ -0.77
PFDN5-209ENST00000550069 TMEM134Q9H6X4 195 aa10.23□□□□□ -0.77
PFDN5-209ENST00000550069 MINK1Q8N4C8 1332 aaPredicted RBP10.23□□□□□ -0.77
PFDN5-209ENST00000550069 SOWAHBA6NEL2 793 aa10.22□□□□□ -0.77
PFDN5-209ENST00000550069 PTPN5P54829 565 aa10.22□□□□□ -0.77
PFDN5-209ENST00000550069 OATP04181 439 aa10.21□□□□□ -0.77
PFDN5-209ENST00000550069 DNAJB2P25686 324 aa10.21□□□□□ -0.77
PFDN5-209ENST00000550069 REPIN1Q9BWE0 567 aaKnown RBP10.21□□□□□ -0.77
PFDN5-209ENST00000550069 SCRIBQ14160 1630 aa10.21□□□□□ -0.78
PFDN5-209ENST00000550069 LRCH3Q96II8 777 aa10.2□□□□□ -0.78
PFDN5-209ENST00000550069 WBP1LQ9NX94 342 aa10.2□□□□□ -0.78
PFDN5-209ENST00000550069 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.2□□□□□ -0.78
PFDN5-209ENST00000550069 RNF40O75150 1001 aa10.19□□□□□ -0.78
PFDN5-209ENST00000550069 HPS5Q9UPZ3 1129 aa10.19□□□□□ -0.78
PFDN5-209ENST00000550069 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.18□□□□□ -0.78
PFDN5-209ENST00000550069 MDM2Q00987 491 aaPredicted RBP10.18□□□□□ -0.78
PFDN5-209ENST00000550069 SLC10A3P09131 477 aa10.17□□□□□ -0.78
PFDN5-209ENST00000550069 TRIM66O15016 1216 aa10.16□□□□□ -0.78
PFDN5-209ENST00000550069 TMUB1Q9BVT8 246 aa10.14□□□□□ -0.79
PFDN5-209ENST00000550069 AK7Q96M32 723 aa10.13□□□□□ -0.79
PFDN5-209ENST00000550069 TSR3Q9UJK0 312 aaKnown RBP10.13□□□□□ -0.79
PFDN5-209ENST00000550069 APLP1P51693 650 aa10.12□□□□□ -0.79
PFDN5-209ENST00000550069 DAXXQ9UER7 740 aaPredicted RBP10.12□□□□□ -0.79
PFDN5-209ENST00000550069 AMHR2Q16671 573 aa10.11□□□□□ -0.79
PFDN5-209ENST00000550069 PARP9Q8IXQ6 854 aa10.11□□□□□ -0.79
PFDN5-209ENST00000550069 HCSTQ9UBK5 93 aa10.11□□□□□ -0.79
PFDN5-209ENST00000550069 DDX11L8A8MPP1 907 aa10.1□□□□□ -0.79
PFDN5-209ENST00000550069 SLF2Q8IX21 1173 aa10.1□□□□□ -0.79
PFDN5-209ENST00000550069 PPP4CP60510 307 aa10.09□□□□□ -0.79
PFDN5-209ENST00000550069 PDE4DQ08499 809 aa10.08□□□□□ -0.8
PFDN5-209ENST00000550069 CFHP08603 1231 aa10.07□□□□□ -0.8
PFDN5-209ENST00000550069 HDGFP51858 240 aaKnown RBP10.07□□□□□ -0.8
PFDN5-209ENST00000550069 TTLL12Q14166 644 aaPredicted RBP10.07□□□□□ -0.8
PFDN5-209ENST00000550069 GIGYF2Q6Y7W6 1299 aaKnown RBP10.07□□□□□ -0.8
PFDN5-209ENST00000550069 GPCPD1Q9NPB8 672 aa10.07□□□□□ -0.8
PFDN5-209ENST00000550069 FAM217BQ9NTX9 383 aaPredicted RBP10.07□□□□□ -0.8
PFDN5-209ENST00000550069 RDH13Q8NBN7 331 aa10.06□□□□□ -0.8
PFDN5-209ENST00000550069 GPBP1L1Q9HC44 474 aaPredicted RBP10.06□□□□□ -0.8
PFDN5-209ENST00000550069 MS4A1P11836 297 aa10.05□□□□□ -0.8
PFDN5-209ENST00000550069 CLCN1P35523 988 aa10.05□□□□□ -0.8
PFDN5-209ENST00000550069 CD46P15529 392 aa10.04□□□□□ -0.8
PFDN5-209ENST00000550069 EIF4G1Q04637 1599 aaKnown RBP10.04□□□□□ -0.8
PFDN5-209ENST00000550069 SSTR3P32745 418 aaPredicted RBP10.01□□□□□ -0.81
PFDN5-209ENST00000550069 HLA-CQ95604 372 aa10.01□□□□□ -0.81
PFDN5-209ENST00000550069 GCGRP47871 477 aa10□□□□□ -0.81
PFDN5-209ENST00000550069 COPS2P61201 443 aa10□□□□□ -0.81
PFDN5-209ENST00000550069 PUS10Q3MIT2 529 aaKnown RBP10□□□□□ -0.81
PFDN5-209ENST00000550069 ZNF516Q92618 1163 aa10□□□□□ -0.81
PFDN5-209ENST00000550069 BLOC1S3Q6QNY0 202 aa9.99□□□□□ -0.81
PFDN5-209ENST00000550069 MTRQ99707 1265 aa9.99□□□□□ -0.81
PFDN5-209ENST00000550069 ACTN4O43707 911 aaKnown RBP9.98□□□□□ -0.81
PFDN5-209ENST00000550069 FUT2Q10981 343 aa9.98□□□□□ -0.81
PFDN5-209ENST00000550069 TJAP1Q5JTD0 557 aa9.98□□□□□ -0.81
PFDN5-209ENST00000550069 SULF1Q8IWU6 871 aa9.98□□□□□ -0.81
PFDN5-209ENST00000550069 SLC4A3P48751 1232 aa9.96□□□□□ -0.82
PFDN5-209ENST00000550069 BRPF1P55201 1214 aaPredicted RBP9.96□□□□□ -0.82
PFDN5-209ENST00000550069 NYAP1Q6ZVC0 841 aa9.96□□□□□ -0.82
PFDN5-209ENST00000550069 BAZ1AQ9NRL2 1556 aaPredicted RBP9.96□□□□□ -0.82
PFDN5-209ENST00000550069 TLL1O43897 1013 aa9.95□□□□□ -0.82
PFDN5-209ENST00000550069 GUCA2AQ02747 115 aa9.95□□□□□ -0.82
PFDN5-209ENST00000550069 KMT5BQ4FZB7 885 aa9.95□□□□□ -0.82
PFDN5-209ENST00000550069 BEGAINQ9BUH8 593 aa9.95□□□□□ -0.82
PFDN5-209ENST00000550069 KDM4CQ9H3R0 1056 aa9.95□□□□□ -0.82
PFDN5-209ENST00000550069 PCDHB3Q9Y5E6 796 aa9.95□□□□□ -0.82
PFDN5-209ENST00000550069 CC2D2AQ9P2K1 1620 aa9.95□□□□□ -0.82
PFDN5-209ENST00000550069 ITGBL1O95965 494 aaPredicted RBP9.94□□□□□ -0.82
PFDN5-209ENST00000550069 NKX2-3Q8TAU0 364 aa9.94□□□□□ -0.82
PFDN5-209ENST00000550069 PLA2G2EQ9NZK7 142 aa9.94□□□□□ -0.82
PFDN5-209ENST00000550069 KDM4AO75164 1064 aa9.92□□□□□ -0.82
PFDN5-209ENST00000550069 NEUROD2Q15784 382 aa9.92□□□□□ -0.82
PFDN5-209ENST00000550069 SPIRE2Q8WWL2 714 aa9.92□□□□□ -0.82
PFDN5-209ENST00000550069 FAM117AQ9C073 453 aa9.92□□□□□ -0.82
PFDN5-209ENST00000550069 SMARCA2P51531 1590 aa9.92□□□□□ -0.82
PFDN5-209ENST00000550069 MORN1Q5T089 497 aa9.91□□□□□ -0.82
PFDN5-209ENST00000550069 NECTIN2Q92692 538 aa9.91□□□□□ -0.82
PFDN5-209ENST00000550069 PEG3Q9GZU2 1588 aa9.91□□□□□ -0.82
PFDN5-209ENST00000550069 PLEKHG3A1L390 1219 aa9.9□□□□□ -0.82
PFDN5-209ENST00000550069 HOXA2O43364 376 aa9.9□□□□□ -0.82
PFDN5-209ENST00000550069 NDUFV2P19404 249 aa9.9□□□□□ -0.82
PFDN5-209ENST00000550069 SLC27A5Q9Y2P5 690 aa9.9□□□□□ -0.82
PFDN5-209ENST00000550069 SMARCA4P51532 1647 aa9.89□□□□□ -0.83
PFDN5-209ENST00000550069 RSPH4AQ5TD94 716 aa9.89□□□□□ -0.83
PFDN5-209ENST00000550069 TBC1D2Q9BYX2 928 aa9.89□□□□□ -0.83
PFDN5-209ENST00000550069 IL21Q9HBE4 155 aa9.89□□□□□ -0.83
PFDN5-209ENST00000550069 NCAPD3P42695 1498 aa9.88□□□□□ -0.83
PFDN5-209ENST00000550069 MOXD2PA6NHM9 499 aa9.88□□□□□ -0.83
PFDN5-209ENST00000550069 ZPR1O75312 459 aa9.88□□□□□ -0.83
PFDN5-209ENST00000550069 ATP6V1AP38606 617 aa9.88□□□□□ -0.83
PFDN5-209ENST00000550069 RNF19BQ6ZMZ0 732 aa9.88□□□□□ -0.83
PFDN5-209ENST00000550069 PRR14Q9BWN1 585 aa9.88□□□□□ -0.83
PFDN5-209ENST00000550069 CECR2Q9BXF3 1484 aa9.87□□□□□ -0.83
PFDN5-209ENST00000550069 KCNC4Q03721 635 aa9.87□□□□□ -0.83
PFDN5-209ENST00000550069 SCUBE3Q8IX30 993 aa9.87□□□□□ -0.83
PFDN5-209ENST00000550069 PCDHGC3Q9UN70 934 aa9.87□□□□□ -0.83
PFDN5-209ENST00000550069 HMGXB3Q12766 1538 aa9.87□□□□□ -0.83
PFDN5-209ENST00000550069 NUTM1Q86Y26 1132 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms