RNA–Protein interactions for RNA: ENST00000548390.5

LETMD1-215, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 549 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-215ENST00000548390 NBPF8Q3BBV2 869 aa24.76■■□□□ 1.55
LETMD1-215ENST00000548390 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.74■■□□□ 1.55
LETMD1-215ENST00000548390 NRXN1Q9ULB1 1477 aa24.74■■□□□ 1.55
LETMD1-215ENST00000548390 NEXMIFQ5QGS0 1516 aa24.74■■□□□ 1.55
LETMD1-215ENST00000548390 MYO3AQ8NEV4 1616 aa24.73■■□□□ 1.55
LETMD1-215ENST00000548390 IFT172Q9UG01 1749 aa24.72■■□□□ 1.55
LETMD1-215ENST00000548390 RALGAPBQ86X10 1494 aa24.72■■□□□ 1.55
LETMD1-215ENST00000548390 KDM4FA0A1W2PPD8 638 aa24.71■■□□□ 1.55
LETMD1-215ENST00000548390 THEMISQ8N1K5 641 aaPredicted RBP24.71■■□□□ 1.55
LETMD1-215ENST00000548390 SETD1BQ9UPS6 1966 aaKnown RBP24.71■■□□□ 1.55
LETMD1-215ENST00000548390 PPLO60437 1756 aa24.7■■□□□ 1.55
LETMD1-215ENST00000548390 RIMS2Q9UQ26 1411 aa24.69■■□□□ 1.54
LETMD1-215ENST00000548390 UBR1Q8IWV7 1749 aa24.69■■□□□ 1.54
LETMD1-215ENST00000548390 TMEM2Q9UHN6 1383 aa24.69■■□□□ 1.54
LETMD1-215ENST00000548390 CEP170BQ9Y4F5 1589 aaPredicted RBP24.68■■□□□ 1.54
LETMD1-215ENST00000548390 ADGRF5Q8IZF2 1346 aa24.67■■□□□ 1.54
LETMD1-215ENST00000548390 PIK3C2GO75747 1445 aa24.67■■□□□ 1.54
LETMD1-215ENST00000548390 ZNF142P52746 1687 aaPredicted RBP24.65■■□□□ 1.54
LETMD1-215ENST00000548390 SLIT1O75093 1534 aa24.65■■□□□ 1.54
LETMD1-215ENST00000548390 GPRASP1Q5JY77 1395 aa24.65■■□□□ 1.54
LETMD1-215ENST00000548390 MYO5BQ9ULV0 1848 aa24.64■■□□□ 1.54
LETMD1-215ENST00000548390 ROCK2O75116 1388 aaKnown RBP24.64■■□□□ 1.53
LETMD1-215ENST00000548390 ARHGAP23Q9P227 1491 aa24.64■■□□□ 1.53
LETMD1-215ENST00000548390 EID1Q9Y6B2 187 aa24.63■■□□□ 1.53
LETMD1-215ENST00000548390 TRPM1Q7Z4N2 1603 aa24.63■■□□□ 1.53
LETMD1-215ENST00000548390 KIAA1210Q9ULL0 1709 aa24.62■■□□□ 1.53
LETMD1-215ENST00000548390 C14orf93Q9H972 538 aaKnown RBP24.61■■□□□ 1.53
LETMD1-215ENST00000548390 CARD11Q9BXL7 1154 aa24.6■■□□□ 1.53
LETMD1-215ENST00000548390 EIF4G2P78344 907 aaKnown RBP eCLIP24.58■■□□□ 1.53
LETMD1-215ENST00000548390 NUTM2DQ5VT03 806 aaPredicted RBP24.58■■□□□ 1.53
LETMD1-215ENST00000548390 LAMC1P11047 1609 aa24.57■■□□□ 1.52
LETMD1-215ENST00000548390 CFAP70Q5T0N1 1121 aa24.56■■□□□ 1.52
LETMD1-215ENST00000548390 TXNDC2Q86VQ3 553 aa24.56■■□□□ 1.52
LETMD1-215ENST00000548390 PLEKHG1Q9ULL1 1385 aa24.55■■□□□ 1.52
LETMD1-215ENST00000548390 SETBP1Q9Y6X0 1596 aa24.55■■□□□ 1.52
LETMD1-215ENST00000548390 NBPF1Q3BBV0 1214 aa24.54■■□□□ 1.52
LETMD1-215ENST00000548390 SCAF11Q99590 1463 aaKnown RBP24.53■■□□□ 1.52
LETMD1-215ENST00000548390 USP47Q96K76 1375 aa24.53■■□□□ 1.52
LETMD1-215ENST00000548390 ZNF316A6NFI3 1004 aaPredicted RBP24.52■■□□□ 1.52
LETMD1-215ENST00000548390 ANKLE2Q86XL3 938 aa24.52■■□□□ 1.52
LETMD1-215ENST00000548390 LTKP29376 864 aa24.51■■□□□ 1.51
LETMD1-215ENST00000548390 HSPA5P11021 654 aaKnown RBP24.48■■□□□ 1.51
LETMD1-215ENST00000548390 EIF3AQ14152 1382 aaKnown RBP24.48■■□□□ 1.51
LETMD1-215ENST00000548390 ALKQ9UM73 1620 aa24.47■■□□□ 1.51
LETMD1-215ENST00000548390 ADGRB1O14514 1584 aa24.47■■□□□ 1.51
LETMD1-215ENST00000548390 BCANQ96GW7 911 aa24.45■■□□□ 1.5
LETMD1-215ENST00000548390 NRXN3Q9Y4C0 1643 aa24.43■■□□□ 1.5
LETMD1-215ENST00000548390 DIP2AQ14689 1571 aa24.42■■□□□ 1.5
LETMD1-215ENST00000548390 TBX22Q9Y458 520 aa24.42■■□□□ 1.5
LETMD1-215ENST00000548390 ADAMTS13Q76LX8 1427 aa24.42■■□□□ 1.5
LETMD1-215ENST00000548390 SLC24A1O60721 1099 aa24.41■■□□□ 1.5
LETMD1-215ENST00000548390 MED14O60244 1454 aa24.4■■□□□ 1.5
LETMD1-215ENST00000548390 IQGAP1P46940 1657 aa24.4■■□□□ 1.5
LETMD1-215ENST00000548390 LMTK3Q96Q04 1460 aa24.39■■□□□ 1.5
LETMD1-215ENST00000548390 TMEM132EQ6IEE7 984 aa24.39■■□□□ 1.49
LETMD1-215ENST00000548390 YTHDC2Q9H6S0 1430 aaKnown RBP24.38■■□□□ 1.49
LETMD1-215ENST00000548390 ST20-MTHFSA0A0A6YYL1 179 aa24.38■■□□□ 1.49
LETMD1-215ENST00000548390 ASXL1Q8IXJ9 1541 aa24.38■■□□□ 1.49
LETMD1-215ENST00000548390 LRPPRCP42704 1394 aaKnown RBP24.38■■□□□ 1.49
LETMD1-215ENST00000548390 NPHP4O75161 1426 aaPredicted RBP24.36■■□□□ 1.49
LETMD1-215ENST00000548390 PIK3R4Q99570 1358 aa24.36■■□□□ 1.49
LETMD1-215ENST00000548390 SETD1AO15047 1707 aaKnown RBP24.35■■□□□ 1.49
LETMD1-215ENST00000548390 ABCC11Q96J66 1382 aa24.35■■□□□ 1.49
LETMD1-215ENST00000548390 METP08581 1390 aa24.34■■□□□ 1.49
LETMD1-215ENST00000548390 SIRT1Q96EB6 747 aa24.33■■□□□ 1.49
LETMD1-215ENST00000548390 HIRIP3Q9BW71 556 aaPredicted RBP24.33■■□□□ 1.49
LETMD1-215ENST00000548390 TRAK1Q9UPV9 953 aa24.33■■□□□ 1.49
LETMD1-215ENST00000548390 DLC1Q96QB1 1528 aa24.33■■□□□ 1.49
LETMD1-215ENST00000548390 SLC26A8Q96RN1 970 aa24.32■■□□□ 1.48
LETMD1-215ENST00000548390 TECPR2O15040 1411 aa24.32■■□□□ 1.48
LETMD1-215ENST00000548390 POLR1AO95602 1720 aaPredicted RBP24.32■■□□□ 1.48
LETMD1-215ENST00000548390 CENPJQ9HC77 1338 aaPredicted RBP24.32■■□□□ 1.48
LETMD1-215ENST00000548390 SBNO2Q9Y2G9 1366 aa24.31■■□□□ 1.48
LETMD1-215ENST00000548390 NCKAP5LQ9HCH0 1330 aa24.31■■□□□ 1.48
LETMD1-215ENST00000548390 TESK2Q96S53 571 aa24.29■■□□□ 1.48
LETMD1-215ENST00000548390 STK26Q9P289 416 aa24.29■■□□□ 1.48
LETMD1-215ENST00000548390 HSPA2P54652 639 aa24.28■■□□□ 1.48
LETMD1-215ENST00000548390 FAM135BQ49AJ0 1406 aa24.27■■□□□ 1.48
LETMD1-215ENST00000548390 TMF1P82094 1093 aa24.27■■□□□ 1.48
LETMD1-215ENST00000548390 KNDC1Q76NI1 1749 aa24.25■■□□□ 1.47
LETMD1-215ENST00000548390 CDCA8Q53HL2 280 aa24.25■■□□□ 1.47
LETMD1-215ENST00000548390 POGKQ9P215 609 aa24.24■■□□□ 1.47
LETMD1-215ENST00000548390 CPS1P31327 1500 aa24.24■■□□□ 1.47
LETMD1-215ENST00000548390 ARHGEF28Q8N1W1 1705 aaKnown RBP24.24■■□□□ 1.47
LETMD1-215ENST00000548390 CCDC7Q96M83 1385 aa24.23■■□□□ 1.47
LETMD1-215ENST00000548390 PTCH1Q13635 1447 aa24.22■■□□□ 1.47
LETMD1-215ENST00000548390 PRAM1Q96QH2 718 aa24.22■■□□□ 1.47
LETMD1-215ENST00000548390 AMOTL2Q9Y2J4 779 aa24.22■■□□□ 1.47
LETMD1-215ENST00000548390 PTPRUQ92729 1446 aa24.21■■□□□ 1.47
LETMD1-215ENST00000548390 WASHC2AQ641Q2 1341 aa24.21■■□□□ 1.47
LETMD1-215ENST00000548390 KIF7Q2M1P5 1343 aa24.2■■□□□ 1.46
LETMD1-215ENST00000548390 C11orf95C9JLR9 678 aaPredicted RBP24.18■■□□□ 1.46
LETMD1-215ENST00000548390 KCNA6P17658 529 aa24.17■■□□□ 1.46
LETMD1-215ENST00000548390 PUS7Q96PZ0 661 aaKnown RBP24.17■■□□□ 1.46
LETMD1-215ENST00000548390 DMRT2Q9Y5R5 561 aa24.17■■□□□ 1.46
LETMD1-215ENST00000548390 ROBO2Q9HCK4 1378 aa24.16■■□□□ 1.46
LETMD1-215ENST00000548390 XRN1Q8IZH2 1706 aaKnown RBP24.16■■□□□ 1.46
LETMD1-215ENST00000548390 QRICH2Q9H0J4 1663 aa24.16■■□□□ 1.46
LETMD1-215ENST00000548390 DISP3Q9P2K9 1392 aa24.16■■□□□ 1.46
LETMD1-215ENST00000548390 EVC2Q86UK5 1308 aa24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms